EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000035876 (Gene tree)
Gene ID: -
Gene Symbol: si:cabz01030277.1
Alias: -
Full Name: poly
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 26019 bases
Position: chr16:40954344-40980362
Accession: 103042229
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000046799	PARP	PF00644.20	4.1e-22	1	1
ENSAMXP00000037442	PARP	PF00644.20	1.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000032110	-	3018	XM_022678346	ENSAMXP00000037442	1006 (aa)	XP_022534067	-
ENSAMXT00000032870	-	3621	XM_022678567	ENSAMXP00000046799	1206 (aa)	XP_022534288	-

Gene Model

Click here to download ENSAMXG00000035876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000035876's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000035876	si:cabz01030277.1	62	32.143	ENSAMXG00000010209	-	52	32.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000035876	si:cabz01030277.1	92	31.362	ENSAMEG00000004862	PARP14	64	31.362	Ailuropoda_melanoleuca
ENSAMXG00000035876	si:cabz01030277.1	50	32.803	ENSACIG00000004252	si:ch211-219a4.3	62	33.121	Amphilophus_citrinellus
ENSAMXG00000035876	si:cabz01030277.1	53	31.910	ENSACIG00000003944	si:ch211-219a4.3	85	44.949	Amphilophus_citrinellus
ENSAMXG00000035876	si:cabz01030277.1	52	32.283	ENSACIG00000004115	si:ch211-219a4.3	77	30.709	Amphilophus_citrinellus
ENSAMXG00000035876	si:cabz01030277.1	94	31.765	ENSAOCG00000012848	si:ch211-219a4.3	78	31.765	Amphiprion_ocellaris
ENSAMXG00000035876	si:cabz01030277.1	58	43.818	ENSAPEG00000003700	-	86	48.900	Amphiprion_percula
ENSAMXG00000035876	si:cabz01030277.1	94	41.401	ENSAPEG00000001687	-	99	49.239	Amphiprion_percula
ENSAMXG00000035876	si:cabz01030277.1	94	31.765	ENSAPEG00000006205	si:ch211-219a4.3	78	31.765	Amphiprion_percula
ENSAMXG00000035876	si:cabz01030277.1	94	42.453	ENSATEG00000011611	-	86	42.453	Anabas_testudineus
ENSAMXG00000035876	si:cabz01030277.1	67	48.626	ENSATEG00000002587	-	85	54.521	Anabas_testudineus
ENSAMXG00000035876	si:cabz01030277.1	75	48.066	ENSATEG00000002592	-	82	55.469	Anabas_testudineus
ENSAMXG00000035876	si:cabz01030277.1	51	49.355	ENSATEG00000002598	-	84	56.250	Anabas_testudineus
ENSAMXG00000035876	si:cabz01030277.1	87	38.589	ENSAPLG00000010410	-	76	38.589	Anas_platyrhynchos
ENSAMXG00000035876	si:cabz01030277.1	99	52.163	ENSACLG00000013074	-	98	52.163	Astatotilapia_calliptera
ENSAMXG00000035876	si:cabz01030277.1	63	45.682	ENSACLG00000013204	-	89	52.219	Astatotilapia_calliptera
ENSAMXG00000035876	si:cabz01030277.1	96	42.388	ENSACLG00000001129	-	93	55.769	Astatotilapia_calliptera
ENSAMXG00000035876	si:cabz01030277.1	51	49.636	ENSACLG00000013116	-	90	50.000	Astatotilapia_calliptera
ENSAMXG00000035876	si:cabz01030277.1	79	34.177	ENSCAPG00000016922	PARP14	74	34.177	Cavia_aperea
ENSAMXG00000035876	si:cabz01030277.1	79	33.249	ENSCPOG00000020020	PARP14	74	33.249	Cavia_porcellus
ENSAMXG00000035876	si:cabz01030277.1	75	32.992	ENSCPBG00000013912	-	63	32.992	Chrysemys_picta_bellii
ENSAMXG00000035876	si:cabz01030277.1	53	44.667	ENSCVAG00000014290	-	91	44.667	Cyprinodon_variegatus
ENSAMXG00000035876	si:cabz01030277.1	95	53.476	ENSCVAG00000014299	-	90	53.476	Cyprinodon_variegatus
ENSAMXG00000035876	si:cabz01030277.1	98	37.333	ENSCVAG00000017536	-	92	37.333	Cyprinodon_variegatus
ENSAMXG00000035876	si:cabz01030277.1	100	44.099	ENSDARG00000105415	si:ch211-163c2.1	99	63.158	Danio_rerio
ENSAMXG00000035876	si:cabz01030277.1	99	57.796	ENSDARG00000099377	si:cabz01030277.1	92	63.889	Danio_rerio
ENSAMXG00000035876	si:cabz01030277.1	55	34.536	ENSDARG00000040445	si:ch211-219a4.3	74	34.704	Danio_rerio
ENSAMXG00000035876	si:cabz01030277.1	95	57.105	ENSDARG00000100612	si:ch211-163c2.1	94	57.105	Danio_rerio
ENSAMXG00000035876	si:cabz01030277.1	55	31.877	ENSETEG00000002790	PARP14	62	31.877	Echinops_telfairi
ENSAMXG00000035876	si:cabz01030277.1	52	32.905	ENSEEUG00000002136	PARP14	87	32.905	Erinaceus_europaeus
ENSAMXG00000035876	si:cabz01030277.1	78	32.487	ENSELUG00000009798	si:ch211-219a4.3	70	32.487	Esox_lucius
ENSAMXG00000035876	si:cabz01030277.1	99	42.147	ENSELUG00000007568	-	91	42.147	Esox_lucius
ENSAMXG00000035876	si:cabz01030277.1	94	39.617	ENSFHEG00000008557	-	88	39.617	Fundulus_heteroclitus
ENSAMXG00000035876	si:cabz01030277.1	80	31.726	ENSGMOG00000011231	-	95	39.130	Gadus_morhua
ENSAMXG00000035876	si:cabz01030277.1	79	33.511	ENSGMOG00000009701	-	68	33.511	Gadus_morhua
ENSAMXG00000035876	si:cabz01030277.1	99	36.649	ENSGAFG00000001814	-	93	36.911	Gambusia_affinis
ENSAMXG00000035876	si:cabz01030277.1	51	33.420	ENSGAFG00000009879	si:ch211-219a4.3	75	33.333	Gambusia_affinis
ENSAMXG00000035876	si:cabz01030277.1	68	32.224	ENSGACG00000018943	-	63	43.522	Gasterosteus_aculeatus
ENSAMXG00000035876	si:cabz01030277.1	96	42.388	ENSHBUG00000018235	-	99	50.246	Haplochromis_burtoni
ENSAMXG00000035876	si:cabz01030277.1	92	35.065	ENSHGLG00000001930	PARP14	59	34.430	Heterocephalus_glaber_female
ENSAMXG00000035876	si:cabz01030277.1	100	74.194	ENSIPUG00000008165	si:cabz01030277.1	99	73.438	Ictalurus_punctatus
ENSAMXG00000035876	si:cabz01030277.1	90	42.000	ENSKMAG00000016827	-	98	47.264	Kryptolebias_marmoratus
ENSAMXG00000035876	si:cabz01030277.1	77	53.600	ENSKMAG00000000939	-	96	53.600	Kryptolebias_marmoratus
ENSAMXG00000035876	si:cabz01030277.1	50	33.272	ENSLBEG00000016023	-	59	50.000	Labrus_bergylta
ENSAMXG00000035876	si:cabz01030277.1	99	42.967	ENSLOCG00000000942	-	83	42.967	Lepisosteus_oculatus
ENSAMXG00000035876	si:cabz01030277.1	53	33.245	ENSLOCG00000001612	-	52	33.245	Lepisosteus_oculatus
ENSAMXG00000035876	si:cabz01030277.1	66	39.660	ENSLOCG00000000239	si:cabz01030277.1	64	42.244	Lepisosteus_oculatus
ENSAMXG00000035876	si:cabz01030277.1	99	52.926	ENSMAMG00000014821	si:cabz01030277.1	89	52.926	Mastacembelus_armatus
ENSAMXG00000035876	si:cabz01030277.1	93	41.801	ENSMAMG00000012368	-	89	40.000	Mastacembelus_armatus
ENSAMXG00000035876	si:cabz01030277.1	96	42.388	ENSMZEG00005020476	-	90	42.388	Maylandia_zebra
ENSAMXG00000035876	si:cabz01030277.1	88	55.348	ENSMZEG00005021082	-	94	55.348	Maylandia_zebra
ENSAMXG00000035876	si:cabz01030277.1	76	32.051	ENSMICG00000049225	PARP14	64	32.051	Microcebus_murinus
ENSAMXG00000035876	si:cabz01030277.1	51	35.714	ENSMOCG00000021121	Parp14	50	35.714	Microtus_ochrogaster
ENSAMXG00000035876	si:cabz01030277.1	96	41.565	ENSMALG00000015837	-	93	48.168	Monopterus_albus
ENSAMXG00000035876	si:cabz01030277.1	93	33.069	MGP_CAROLIEiJ_G0020706	Parp14	74	33.069	Mus_caroli
ENSAMXG00000035876	si:cabz01030277.1	53	31.714	ENSMPUG00000004629	PARP14	50	31.714	Mustela_putorius_furo
ENSAMXG00000035876	si:cabz01030277.1	92	34.694	ENSMLUG00000030765	-	79	34.694	Myotis_lucifugus
ENSAMXG00000035876	si:cabz01030277.1	90	33.929	ENSMLUG00000022755	-	74	33.929	Myotis_lucifugus
ENSAMXG00000035876	si:cabz01030277.1	92	33.588	ENSMLUG00000008047	-	80	33.588	Myotis_lucifugus
ENSAMXG00000035876	si:cabz01030277.1	92	34.615	ENSMLUG00000023256	-	80	34.694	Myotis_lucifugus
ENSAMXG00000035876	si:cabz01030277.1	50	41.497	ENSNBRG00000005232	-	99	49.754	Neolamprologus_brichardi
ENSAMXG00000035876	si:cabz01030277.1	76	33.673	ENSODEG00000008430	PARP14	68	33.673	Octodon_degus
ENSAMXG00000035876	si:cabz01030277.1	58	43.373	ENSONIG00000012986	-	99	42.174	Oreochromis_niloticus
ENSAMXG00000035876	si:cabz01030277.1	62	30.312	ENSONIG00000007870	-	91	30.312	Oreochromis_niloticus
ENSAMXG00000035876	si:cabz01030277.1	51	47.417	ENSORLG00000007845	-	84	54.688	Oryzias_latipes
ENSAMXG00000035876	si:cabz01030277.1	55	50.313	ENSORLG00000026291	-	97	52.800	Oryzias_latipes
ENSAMXG00000035876	si:cabz01030277.1	99	52.674	ENSORLG00020005938	-	93	52.674	Oryzias_latipes_hni
ENSAMXG00000035876	si:cabz01030277.1	64	49.688	ENSORLG00020005917	-	97	52.267	Oryzias_latipes_hni
ENSAMXG00000035876	si:cabz01030277.1	91	33.858	ENSORLG00015021971	si:ch211-219a4.3	87	44.670	Oryzias_latipes_hsok
ENSAMXG00000035876	si:cabz01030277.1	51	32.898	ENSOMEG00000019715	si:ch211-219a4.3	94	44.670	Oryzias_melastigma
ENSAMXG00000035876	si:cabz01030277.1	99	38.422	ENSOMEG00000022143	-	93	38.422	Oryzias_melastigma
ENSAMXG00000035876	si:cabz01030277.1	99	40.000	ENSPKIG00000022431	-	94	40.000	Paramormyrops_kingsleyae
ENSAMXG00000035876	si:cabz01030277.1	81	46.452	ENSPMAG00000008302	-	78	46.452	Petromyzon_marinus
ENSAMXG00000035876	si:cabz01030277.1	61	34.498	ENSPCIG00000023254	-	54	34.483	Phascolarctos_cinereus
ENSAMXG00000035876	si:cabz01030277.1	51	37.379	ENSPFOG00000023812	-	76	44.351	Poecilia_formosa
ENSAMXG00000035876	si:cabz01030277.1	99	51.852	ENSPFOG00000005470	-	97	51.852	Poecilia_formosa
ENSAMXG00000035876	si:cabz01030277.1	99	35.864	ENSPFOG00000000012	-	93	36.126	Poecilia_formosa
ENSAMXG00000035876	si:cabz01030277.1	59	45.858	ENSPLAG00000004367	-	92	50.532	Poecilia_latipinna
ENSAMXG00000035876	si:cabz01030277.1	99	36.126	ENSPMEG00000004328	-	88	48.756	Poecilia_mexicana
ENSAMXG00000035876	si:cabz01030277.1	59	46.154	ENSPMEG00000012541	-	92	51.064	Poecilia_mexicana
ENSAMXG00000035876	si:cabz01030277.1	59	45.428	ENSPREG00000003531	-	92	50.133	Poecilia_reticulata
ENSAMXG00000035876	si:cabz01030277.1	94	40.566	ENSPREG00000007508	-	84	49.215	Poecilia_reticulata
ENSAMXG00000035876	si:cabz01030277.1	65	55.814	ENSPREG00000003544	-	97	55.814	Poecilia_reticulata
ENSAMXG00000035876	si:cabz01030277.1	93	32.398	ENSPVAG00000012722	PARP14	87	32.323	Pteropus_vampyrus
ENSAMXG00000035876	si:cabz01030277.1	61	39.831	ENSSFOG00015001605	-	81	39.331	Scleropages_formosus
ENSAMXG00000035876	si:cabz01030277.1	50	42.373	ENSSFOG00015012771	-	97	42.373	Scleropages_formosus
ENSAMXG00000035876	si:cabz01030277.1	99	41.592	ENSSDUG00000007589	-	89	55.769	Seriola_dumerili
ENSAMXG00000035876	si:cabz01030277.1	98	41.290	ENSSDUG00000001575	-	88	41.290	Seriola_dumerili
ENSAMXG00000035876	si:cabz01030277.1	98	40.968	ENSSLDG00000005702	-	88	40.968	Seriola_lalandi_dorsalis
ENSAMXG00000035876	si:cabz01030277.1	92	33.509	ENSSARG00000011299	PARP14	75	33.156	Sorex_araneus
ENSAMXG00000035876	si:cabz01030277.1	96	30.469	ENSSPUG00000016288	-	72	30.469	Sphenodon_punctatus
ENSAMXG00000035876	si:cabz01030277.1	93	40.968	ENSSPAG00000023229	-	84	40.968	Stegastes_partitus
ENSAMXG00000035876	si:cabz01030277.1	99	52.865	ENSSPAG00000004785	-	93	52.865	Stegastes_partitus
ENSAMXG00000035876	si:cabz01030277.1	99	45.758	ENSSPAG00000004771	-	85	51.128	Stegastes_partitus
ENSAMXG00000035876	si:cabz01030277.1	58	45.312	ENSXMAG00000027110	-	94	49.468	Xiphophorus_maculatus
ENSAMXG00000035876	si:cabz01030277.1	51	36.893	ENSXMAG00000024189	-	76	43.933	Xiphophorus_maculatus
ENSAMXG00000035876	si:cabz01030277.1	91	43.911	ENSXMAG00000016244	-	93	36.126	Xiphophorus_maculatus
ENSAMXG00000035876	si:cabz01030277.1	51	46.961	ENSXMAG00000001866	-	93	55.469	Xiphophorus_maculatus