EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000035893 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 2761 bases
Position: chrAPWO02001664.1:281551-284311
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000034971	RVT_1	PF00078.27	2.9e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000032063	-	2761	-	ENSAMXP00000034971	625 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000035893's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000035893's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000035893	-	91	30.988	ENSAMXG00000037864	-	51	30.988
ENSAMXG00000035893	-	56	34.908	ENSAMXG00000041465	-	52	34.908
ENSAMXG00000035893	-	62	34.058	ENSAMXG00000042777	-	54	34.058
ENSAMXG00000035893	-	76	53.878	ENSAMXG00000043631	-	59	53.878
ENSAMXG00000035893	-	81	35.182	ENSAMXG00000037637	-	85	35.182
ENSAMXG00000035893	-	92	62.371	ENSAMXG00000039473	-	51	62.371

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000035893	-	86	30.345	ENSMALG00000014073	-	78	30.345	Monopterus_albus
ENSAMXG00000035893	-	85	52.908	ENSMALG00000004164	-	89	52.908	Monopterus_albus
ENSAMXG00000035893	-	89	30.508	ENSORLG00000028047	-	88	30.508	Oryzias_latipes
ENSAMXG00000035893	-	89	42.032	ENSORLG00020011622	-	67	42.032	Oryzias_latipes_hni
ENSAMXG00000035893	-	86	40.687	ENSPKIG00000018433	-	85	40.687	Paramormyrops_kingsleyae
ENSAMXG00000035893	-	94	41.315	ENSPREG00000007910	-	52	41.315	Poecilia_reticulata