EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000035908 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 7222 bases
Position: chr25:21859913-21867134
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000037639	ResIII	PF04851.15	1.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000041438	-	1410	-	ENSAMXP00000037639	469 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000035908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000035908's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000035908	-	87	30.283	ENSAMXG00000012777	rad54l	58	30.501

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000035908	-	91	36.304	ENSAPOG00000011392	ercc6l	68	36.304	Acanthochromis_polyacanthus
ENSAMXG00000035908	-	91	34.792	ENSACAG00000028866	-	64	34.792	Anolis_carolinensis
ENSAMXG00000035908	-	91	34.792	ENSACAG00000029354	-	67	34.792	Anolis_carolinensis
ENSAMXG00000035908	-	94	35.412	ENSCPBG00000011965	ERCC6L	71	37.300	Chrysemys_picta_bellii
ENSAMXG00000035908	-	89	31.078	ENSCSAVG00000010291	-	81	31.078	Ciona_savignyi
ENSAMXG00000035908	-	89	36.105	ENSCVAG00000008090	ercc6l	63	36.105	Cyprinodon_variegatus
ENSAMXG00000035908	-	91	36.383	ENSFHEG00000007269	-	67	36.383	Fundulus_heteroclitus
ENSAMXG00000035908	-	89	34.247	ENSGAFG00000020545	-	94	34.247	Gambusia_affinis
ENSAMXG00000035908	-	91	35.818	ENSGACG00000001096	ercc6l	82	35.818	Gasterosteus_aculeatus
ENSAMXG00000035908	-	79	35.248	ENSLOCG00000017476	-	95	35.248	Lepisosteus_oculatus
ENSAMXG00000035908	-	91	35.510	ENSMMOG00000020762	ercc6l	65	39.032	Mola_mola
ENSAMXG00000035908	-	91	34.066	ENSORLG00000024240	ercc6l	63	34.066	Oryzias_latipes
ENSAMXG00000035908	-	85	34.286	ENSORLG00015007108	ercc6l	64	34.211	Oryzias_latipes_hsok
ENSAMXG00000035908	-	88	35.504	ENSPMAG00000005064	ercc6l	64	35.504	Petromyzon_marinus
ENSAMXG00000035908	-	70	77.778	ENSPNAG00000029823	-	78	77.778	Pygocentrus_nattereri
ENSAMXG00000035908	-	89	34.810	ENSTGUG00000004992	ERCC6L	85	34.560	Taeniopygia_guttata
ENSAMXG00000035908	-	89	34.369	ENSTNIG00000001002	ercc6l	86	34.337	Tetraodon_nigroviridis
ENSAMXG00000035908	-	89	38.761	ENSXCOG00000011494	ercc6l	63	38.761	Xiphophorus_couchianus