EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000035914 (Gene tree)
Gene ID: 103036953
Gene Symbol: si:dkey-24l11.2
Alias: -
Full Name: uncharacterized LOC103036953
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 24395 bases
Position: chr18:39147273-39171667
Accession: 103036953
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000054747	zf-CCCH	PF00642.24	6.9e-09	1	1
ENSAMXP00000045900	zf-CCCH	PF00642.24	7.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000034382	-	5140	XM_022679932	ENSAMXP00000045900	690 (aa)	XP_022535653	UPI000BBD9BDD
ENSAMXT00000052129	-	5080	-	ENSAMXP00000054747	670 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000035914's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000035914's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000035914	si:dkey-24l11.2	56	56.675	ENSAPOG00000009246	-	96	56.888	Acanthochromis_polyacanthus
ENSAMXG00000035914	si:dkey-24l11.2	56	55.297	ENSACIG00000000516	-	94	55.352	Amphilophus_citrinellus
ENSAMXG00000035914	si:dkey-24l11.2	56	56.997	ENSAOCG00000003240	-	88	56.104	Amphiprion_ocellaris
ENSAMXG00000035914	si:dkey-24l11.2	92	60.916	ENSATEG00000006680	si:dkey-24l11.2	97	61.385	Anabas_testudineus
ENSAMXG00000035914	si:dkey-24l11.2	56	56.477	ENSACLG00000019918	-	94	56.283	Astatotilapia_calliptera
ENSAMXG00000035914	si:dkey-24l11.2	91	59.119	ENSCSEG00000013278	si:dkey-24l11.2	96	58.978	Cynoglossus_semilaevis
ENSAMXG00000035914	si:dkey-24l11.2	92	60.896	ENSCVAG00000016988	si:dkey-24l11.2	97	60.592	Cyprinodon_variegatus
ENSAMXG00000035914	si:dkey-24l11.2	93	60.420	ENSELUG00000018751	si:dkey-24l11.2	94	61.153	Esox_lucius
ENSAMXG00000035914	si:dkey-24l11.2	92	60.957	ENSGAFG00000000907	si:dkey-24l11.2	96	60.964	Gambusia_affinis
ENSAMXG00000035914	si:dkey-24l11.2	56	56.995	ENSHBUG00000000459	-	94	56.806	Haplochromis_burtoni
ENSAMXG00000035914	si:dkey-24l11.2	93	59.299	ENSHCOG00000011721	si:dkey-24l11.2	96	59.598	Hippocampus_comes
ENSAMXG00000035914	si:dkey-24l11.2	93	62.016	ENSKMAG00000016828	si:dkey-24l11.2	96	62.402	Kryptolebias_marmoratus
ENSAMXG00000035914	si:dkey-24l11.2	91	62.651	ENSLOCG00000014681	si:dkey-24l11.2	95	63.198	Lepisosteus_oculatus
ENSAMXG00000035914	si:dkey-24l11.2	93	61.897	ENSMAMG00000008500	si:dkey-24l11.2	97	62.145	Mastacembelus_armatus
ENSAMXG00000035914	si:dkey-24l11.2	56	56.477	ENSMZEG00005022357	-	94	56.283	Maylandia_zebra
ENSAMXG00000035914	si:dkey-24l11.2	55	55.172	ENSMMOG00000006855	-	92	55.087	Mola_mola
ENSAMXG00000035914	si:dkey-24l11.2	89	60.625	ENSMALG00000009557	si:dkey-24l11.2	95	60.925	Monopterus_albus
ENSAMXG00000035914	si:dkey-24l11.2	56	50.882	ENSORLG00000007981	-	90	52.219	Oryzias_latipes
ENSAMXG00000035914	si:dkey-24l11.2	55	52.488	ENSORLG00020005134	-	93	53.590	Oryzias_latipes_hni
ENSAMXG00000035914	si:dkey-24l11.2	56	53.924	ENSOMEG00000023279	-	95	52.956	Oryzias_melastigma
ENSAMXG00000035914	si:dkey-24l11.2	91	59.688	ENSPKIG00000001978	si:dkey-24l11.2	96	59.906	Paramormyrops_kingsleyae
ENSAMXG00000035914	si:dkey-24l11.2	56	54.430	ENSPFOG00000003642	si:dkey-24l11.2	95	54.359	Poecilia_formosa
ENSAMXG00000035914	si:dkey-24l11.2	56	55.138	ENSPLAG00000017675	-	88	54.569	Poecilia_latipinna
ENSAMXG00000035914	si:dkey-24l11.2	92	61.051	ENSPMEG00000001177	si:dkey-24l11.2	97	61.059	Poecilia_mexicana
ENSAMXG00000035914	si:dkey-24l11.2	92	61.442	ENSPREG00000008065	si:dkey-24l11.2	91	61.611	Poecilia_reticulata
ENSAMXG00000035914	si:dkey-24l11.2	56	56.041	ENSPNYG00000011245	-	93	55.584	Pundamilia_nyererei
ENSAMXG00000035914	si:dkey-24l11.2	92	69.369	ENSPNAG00000001676	si:dkey-24l11.2	93	68.997	Pygocentrus_nattereri
ENSAMXG00000035914	si:dkey-24l11.2	91	60.247	ENSSFOG00015020381	si:dkey-24l11.2	95	60.247	Scleropages_formosus
ENSAMXG00000035914	si:dkey-24l11.2	93	59.043	ENSSMAG00000000823	si:dkey-24l11.2	97	61.025	Scophthalmus_maximus
ENSAMXG00000035914	si:dkey-24l11.2	92	61.515	ENSSDUG00000010620	si:dkey-24l11.2	97	60.942	Seriola_dumerili
ENSAMXG00000035914	si:dkey-24l11.2	92	60.720	ENSSLDG00000000205	si:dkey-24l11.2	97	60.401	Seriola_lalandi_dorsalis
ENSAMXG00000035914	si:dkey-24l11.2	92	61.221	ENSSPAG00000020867	si:dkey-24l11.2	97	61.599	Stegastes_partitus
ENSAMXG00000035914	si:dkey-24l11.2	92	57.960	ENSTRUG00000021832	si:dkey-24l11.2	95	58.333	Takifugu_rubripes
ENSAMXG00000035914	si:dkey-24l11.2	92	55.694	ENSTNIG00000019253	si:dkey-24l11.2	97	55.869	Tetraodon_nigroviridis
ENSAMXG00000035914	si:dkey-24l11.2	56	55.499	ENSXCOG00000020217	-	95	55.440	Xiphophorus_couchianus
ENSAMXG00000035914	si:dkey-24l11.2	92	61.682	ENSXMAG00000003014	si:dkey-24l11.2	96	61.695	Xiphophorus_maculatus