EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000036020 (Gene tree)
Gene ID: 103029648
Gene Symbol: polr3f
Alias: zgc:56299|zgc:76983
Full Name: RNA polymerase III subunit F
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 8476 bases
Position: chrAPWO02000051.1:3507114-3515589
Accession: 103029648
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000048127	RNA_pol_Rpc34	PF05158.12	1.8e-99	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000030840	-	2125	XM_022665416	ENSAMXP00000048127	314 (aa)	XP_022521137	UPI000BBE04C4

Gene Model

Click here to download ENSAMXG00000036020's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03020	RNA polymerase	KEGG
amex04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000036020's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000036020	polr3f	100	87.658	ENSG00000132664	POLR3F	100	87.658	Homo_sapiens
ENSAMXG00000036020	polr3f	100	91.139	ENSAPOG00000008271	polr3f	100	91.139	Acanthochromis_polyacanthus
ENSAMXG00000036020	polr3f	100	87.342	ENSAMEG00000005222	POLR3F	100	87.342	Ailuropoda_melanoleuca
ENSAMXG00000036020	polr3f	100	86.624	ENSACIG00000006705	polr3f	100	86.624	Amphilophus_citrinellus
ENSAMXG00000036020	polr3f	100	91.139	ENSAOCG00000000687	polr3f	100	91.139	Amphiprion_ocellaris
ENSAMXG00000036020	polr3f	100	90.823	ENSAPEG00000015263	polr3f	100	90.823	Amphiprion_percula
ENSAMXG00000036020	polr3f	88	93.818	ENSATEG00000015539	polr3f	100	93.818	Anabas_testudineus
ENSAMXG00000036020	polr3f	88	90.182	ENSAPLG00000005533	POLR3F	100	90.182	Anas_platyrhynchos
ENSAMXG00000036020	polr3f	98	86.731	ENSACAG00000014293	POLR3F	99	86.731	Anolis_carolinensis
ENSAMXG00000036020	polr3f	100	87.975	ENSANAG00000026726	POLR3F	100	87.975	Aotus_nancymaae
ENSAMXG00000036020	polr3f	100	91.772	ENSACLG00000003615	polr3f	100	91.772	Astatotilapia_calliptera
ENSAMXG00000036020	polr3f	100	87.025	ENSBTAG00000008825	POLR3F	100	87.025	Bos_taurus
ENSAMXG00000036020	polr3f	98	33.442	WBGene00021112	W09C3.4	98	33.442	Caenorhabditis_elegans
ENSAMXG00000036020	polr3f	100	87.975	ENSCJAG00000005159	POLR3F	100	87.975	Callithrix_jacchus
ENSAMXG00000036020	polr3f	100	87.025	ENSCAFG00000005420	POLR3F	100	87.025	Canis_familiaris
ENSAMXG00000036020	polr3f	100	87.025	ENSCAFG00020027500	POLR3F	100	87.025	Canis_lupus_dingo
ENSAMXG00000036020	polr3f	100	87.025	ENSCHIG00000014743	POLR3F	100	87.025	Capra_hircus
ENSAMXG00000036020	polr3f	100	87.025	ENSTSYG00000004207	POLR3F	100	87.025	Carlito_syrichta
ENSAMXG00000036020	polr3f	94	48.649	ENSCAPG00000008423	POLR3F	100	48.649	Cavia_aperea
ENSAMXG00000036020	polr3f	100	87.025	ENSCPOG00000002400	POLR3F	100	87.025	Cavia_porcellus
ENSAMXG00000036020	polr3f	100	77.848	ENSCCAG00000021800	POLR3F	100	77.848	Cebus_capucinus
ENSAMXG00000036020	polr3f	100	87.342	ENSCATG00000019507	POLR3F	100	87.342	Cercocebus_atys
ENSAMXG00000036020	polr3f	100	87.342	ENSCLAG00000016296	POLR3F	100	87.342	Chinchilla_lanigera
ENSAMXG00000036020	polr3f	100	87.342	ENSCSAG00000011513	POLR3F	100	87.342	Chlorocebus_sabaeus
ENSAMXG00000036020	polr3f	73	88.764	ENSCHOG00000013268	POLR3F	73	88.764	Choloepus_hoffmanni
ENSAMXG00000036020	polr3f	88	90.545	ENSCPBG00000023473	POLR3F	100	90.545	Chrysemys_picta_bellii
ENSAMXG00000036020	polr3f	99	60.064	ENSCING00000001212	-	99	60.064	Ciona_intestinalis
ENSAMXG00000036020	polr3f	71	59.193	ENSCSAVG00000003340	-	96	63.905	Ciona_savignyi
ENSAMXG00000036020	polr3f	92	87.285	ENSCANG00000037390	POLR3F	100	87.285	Colobus_angolensis_palliatus
ENSAMXG00000036020	polr3f	100	86.709	ENSCGRG00001002032	Polr3f	100	86.709	Cricetulus_griseus_chok1gshd
ENSAMXG00000036020	polr3f	100	86.709	ENSCGRG00000010852	Polr3f	100	86.709	Cricetulus_griseus_crigri
ENSAMXG00000036020	polr3f	100	88.608	ENSCSEG00000001247	polr3f	100	88.608	Cynoglossus_semilaevis
ENSAMXG00000036020	polr3f	100	89.557	ENSCVAG00000007611	polr3f	100	89.557	Cyprinodon_variegatus
ENSAMXG00000036020	polr3f	100	94.586	ENSDARG00000012572	polr3f	100	94.586	Danio_rerio
ENSAMXG00000036020	polr3f	100	84.494	ENSDNOG00000010719	POLR3F	100	84.494	Dasypus_novemcinctus
ENSAMXG00000036020	polr3f	100	87.342	ENSDORG00000016352	Polr3f	100	87.342	Dipodomys_ordii
ENSAMXG00000036020	polr3f	93	51.712	FBgn0038951	CG5380	96	51.712	Drosophila_melanogaster
ENSAMXG00000036020	polr3f	89	52.158	ENSETEG00000015485	-	99	52.158	Echinops_telfairi
ENSAMXG00000036020	polr3f	100	76.433	ENSEBUG00000006783	polr3f	100	76.433	Eptatretus_burgeri
ENSAMXG00000036020	polr3f	100	87.658	ENSEASG00005002022	POLR3F	100	87.658	Equus_asinus_asinus
ENSAMXG00000036020	polr3f	100	87.658	ENSECAG00000009920	POLR3F	100	87.658	Equus_caballus
ENSAMXG00000036020	polr3f	80	84.000	ENSEEUG00000000184	POLR3F	80	84.000	Erinaceus_europaeus
ENSAMXG00000036020	polr3f	100	93.949	ENSELUG00000001558	polr3f	100	93.949	Esox_lucius
ENSAMXG00000036020	polr3f	100	87.342	ENSFCAG00000013828	POLR3F	100	87.342	Felis_catus
ENSAMXG00000036020	polr3f	88	91.273	ENSFALG00000007623	POLR3F	100	91.273	Ficedula_albicollis
ENSAMXG00000036020	polr3f	100	87.025	ENSFDAG00000002528	POLR3F	100	87.025	Fukomys_damarensis
ENSAMXG00000036020	polr3f	100	88.924	ENSFHEG00000006450	polr3f	100	88.924	Fundulus_heteroclitus
ENSAMXG00000036020	polr3f	100	89.809	ENSGALG00000008749	POLR3F	100	89.809	Gallus_gallus
ENSAMXG00000036020	polr3f	100	90.823	ENSGAFG00000003698	polr3f	100	90.823	Gambusia_affinis
ENSAMXG00000036020	polr3f	100	88.854	ENSGAGG00000006151	POLR3F	100	88.854	Gopherus_agassizii
ENSAMXG00000036020	polr3f	100	87.658	ENSGGOG00000011543	POLR3F	100	87.658	Gorilla_gorilla
ENSAMXG00000036020	polr3f	100	92.089	ENSHBUG00000013806	polr3f	100	92.089	Haplochromis_burtoni
ENSAMXG00000036020	polr3f	100	87.025	ENSHGLG00000011867	POLR3F	100	87.025	Heterocephalus_glaber_female
ENSAMXG00000036020	polr3f	100	87.025	ENSHGLG00100012577	POLR3F	100	87.025	Heterocephalus_glaber_male
ENSAMXG00000036020	polr3f	100	80.063	ENSHCOG00000011751	polr3f	100	80.063	Hippocampus_comes
ENSAMXG00000036020	polr3f	100	95.860	ENSIPUG00000013347	polr3f	100	95.860	Ictalurus_punctatus
ENSAMXG00000036020	polr3f	100	87.342	ENSSTOG00000013588	POLR3F	100	87.342	Ictidomys_tridecemlineatus
ENSAMXG00000036020	polr3f	100	86.709	ENSJJAG00000017513	Polr3f	100	86.709	Jaculus_jaculus
ENSAMXG00000036020	polr3f	88	85.455	ENSKMAG00000016495	polr3f	100	85.455	Kryptolebias_marmoratus
ENSAMXG00000036020	polr3f	74	95.259	ENSLBEG00000011998	polr3f	100	95.259	Labrus_bergylta
ENSAMXG00000036020	polr3f	100	89.809	ENSLACG00000009371	POLR3F	100	89.809	Latimeria_chalumnae
ENSAMXG00000036020	polr3f	100	93.949	ENSLOCG00000015701	polr3f	100	93.949	Lepisosteus_oculatus
ENSAMXG00000036020	polr3f	100	87.025	ENSLAFG00000004929	POLR3F	100	87.025	Loxodonta_africana
ENSAMXG00000036020	polr3f	100	87.342	ENSMFAG00000002227	POLR3F	100	87.342	Macaca_fascicularis
ENSAMXG00000036020	polr3f	88	89.455	ENSMMUG00000004143	POLR3F	100	89.455	Macaca_mulatta
ENSAMXG00000036020	polr3f	100	87.342	ENSMNEG00000033404	POLR3F	100	87.342	Macaca_nemestrina
ENSAMXG00000036020	polr3f	100	87.342	ENSMLEG00000021905	POLR3F	100	87.342	Mandrillus_leucophaeus
ENSAMXG00000036020	polr3f	100	92.089	ENSMAMG00000017975	polr3f	100	92.089	Mastacembelus_armatus
ENSAMXG00000036020	polr3f	100	91.456	ENSMZEG00005015134	polr3f	100	91.456	Maylandia_zebra
ENSAMXG00000036020	polr3f	100	90.127	ENSMGAG00000006691	POLR3F	100	90.127	Meleagris_gallopavo
ENSAMXG00000036020	polr3f	100	86.709	ENSMAUG00000020176	Polr3f	100	86.709	Mesocricetus_auratus
ENSAMXG00000036020	polr3f	100	87.342	ENSMICG00000044519	POLR3F	100	87.342	Microcebus_murinus
ENSAMXG00000036020	polr3f	100	87.025	ENSMOCG00000018352	Polr3f	100	87.025	Microtus_ochrogaster
ENSAMXG00000036020	polr3f	94	92.256	ENSMMOG00000018477	polr3f	100	92.256	Mola_mola
ENSAMXG00000036020	polr3f	100	87.342	ENSMODG00000005624	POLR3F	100	87.342	Monodelphis_domestica
ENSAMXG00000036020	polr3f	100	92.722	ENSMALG00000006685	polr3f	100	92.722	Monopterus_albus
ENSAMXG00000036020	polr3f	100	86.392	MGP_CAROLIEiJ_G0024385	Polr3f	100	86.392	Mus_caroli
ENSAMXG00000036020	polr3f	100	86.392	ENSMUSG00000027427	Polr3f	100	86.392	Mus_musculus
ENSAMXG00000036020	polr3f	100	86.392	MGP_PahariEiJ_G0025829	Polr3f	100	86.392	Mus_pahari
ENSAMXG00000036020	polr3f	100	86.392	MGP_SPRETEiJ_G0025304	Polr3f	100	86.392	Mus_spretus
ENSAMXG00000036020	polr3f	100	67.385	ENSMPUG00000001252	-	100	67.385	Mustela_putorius_furo
ENSAMXG00000036020	polr3f	100	87.342	ENSMLUG00000014844	POLR3F	100	87.342	Myotis_lucifugus
ENSAMXG00000036020	polr3f	100	86.392	ENSNGAG00000010898	Polr3f	100	86.392	Nannospalax_galili
ENSAMXG00000036020	polr3f	100	92.405	ENSNBRG00000020796	polr3f	100	92.405	Neolamprologus_brichardi
ENSAMXG00000036020	polr3f	100	87.658	ENSNLEG00000009778	POLR3F	100	87.658	Nomascus_leucogenys
ENSAMXG00000036020	polr3f	94	83.051	ENSMEUG00000010320	POLR3F	100	83.051	Notamacropus_eugenii
ENSAMXG00000036020	polr3f	100	86.709	ENSOPRG00000003385	POLR3F	100	86.709	Ochotona_princeps
ENSAMXG00000036020	polr3f	100	87.658	ENSODEG00000011521	POLR3F	100	87.658	Octodon_degus
ENSAMXG00000036020	polr3f	100	91.139	ENSONIG00000006858	polr3f	100	91.139	Oreochromis_niloticus
ENSAMXG00000036020	polr3f	100	87.658	ENSOANG00000001253	POLR3F	100	87.658	Ornithorhynchus_anatinus
ENSAMXG00000036020	polr3f	100	87.658	ENSOCUG00000015067	POLR3F	100	87.658	Oryctolagus_cuniculus
ENSAMXG00000036020	polr3f	100	87.658	ENSORLG00000022412	polr3f	100	87.658	Oryzias_latipes
ENSAMXG00000036020	polr3f	100	87.658	ENSORLG00020021944	polr3f	100	87.658	Oryzias_latipes_hni
ENSAMXG00000036020	polr3f	100	86.392	ENSOGAG00000002916	POLR3F	100	86.392	Otolemur_garnettii
ENSAMXG00000036020	polr3f	100	52.848	ENSOARG00000008647	-	100	52.848	Ovis_aries
ENSAMXG00000036020	polr3f	100	87.025	ENSOARG00000000315	-	100	87.025	Ovis_aries
ENSAMXG00000036020	polr3f	100	87.658	ENSPPAG00000036681	POLR3F	100	87.658	Pan_paniscus
ENSAMXG00000036020	polr3f	100	87.342	ENSPPRG00000024604	POLR3F	100	87.342	Panthera_pardus
ENSAMXG00000036020	polr3f	100	87.342	ENSPTIG00000020292	POLR3F	100	87.342	Panthera_tigris_altaica
ENSAMXG00000036020	polr3f	100	87.658	ENSPTRG00000013287	POLR3F	100	87.658	Pan_troglodytes
ENSAMXG00000036020	polr3f	100	87.342	ENSPANG00000025015	POLR3F	100	87.342	Papio_anubis
ENSAMXG00000036020	polr3f	100	93.312	ENSPKIG00000004427	polr3f	100	93.312	Paramormyrops_kingsleyae
ENSAMXG00000036020	polr3f	88	91.636	ENSPSIG00000016613	POLR3F	100	91.636	Pelodiscus_sinensis
ENSAMXG00000036020	polr3f	100	56.740	ENSPMGG00000018350	polr3f	100	60.443	Periophthalmus_magnuspinnatus
ENSAMXG00000036020	polr3f	100	87.342	ENSPEMG00000006966	Polr3f	100	87.342	Peromyscus_maniculatus_bairdii
ENSAMXG00000036020	polr3f	100	80.573	ENSPMAG00000005530	polr3f	100	80.573	Petromyzon_marinus
ENSAMXG00000036020	polr3f	100	87.025	ENSPCIG00000000908	POLR3F	85	87.025	Phascolarctos_cinereus
ENSAMXG00000036020	polr3f	100	90.823	ENSPFOG00000018334	polr3f	100	90.823	Poecilia_formosa
ENSAMXG00000036020	polr3f	100	90.823	ENSPLAG00000021803	polr3f	100	90.823	Poecilia_latipinna
ENSAMXG00000036020	polr3f	100	90.823	ENSPMEG00000013150	polr3f	100	90.823	Poecilia_mexicana
ENSAMXG00000036020	polr3f	100	90.823	ENSPREG00000005278	polr3f	100	90.823	Poecilia_reticulata
ENSAMXG00000036020	polr3f	100	87.658	ENSPPYG00000010737	POLR3F	100	87.658	Pongo_abelii
ENSAMXG00000036020	polr3f	66	89.865	ENSPCAG00000004893	POLR3F	71	89.865	Procavia_capensis
ENSAMXG00000036020	polr3f	100	87.342	ENSPCOG00000004543	POLR3F	100	87.342	Propithecus_coquereli
ENSAMXG00000036020	polr3f	100	87.025	ENSPVAG00000000403	POLR3F	100	87.025	Pteropus_vampyrus
ENSAMXG00000036020	polr3f	100	92.089	ENSPNYG00000016276	polr3f	100	92.089	Pundamilia_nyererei
ENSAMXG00000036020	polr3f	100	96.815	ENSPNAG00000005164	polr3f	100	96.815	Pygocentrus_nattereri
ENSAMXG00000036020	polr3f	100	86.709	ENSRNOG00000007548	Polr3f	85	86.709	Rattus_norvegicus
ENSAMXG00000036020	polr3f	100	87.342	ENSRBIG00000021268	POLR3F	100	87.342	Rhinopithecus_bieti
ENSAMXG00000036020	polr3f	100	87.342	ENSRROG00000039911	POLR3F	100	87.342	Rhinopithecus_roxellana
ENSAMXG00000036020	polr3f	62	30.244	YNR003C	RPC34	64	30.244	Saccharomyces_cerevisiae
ENSAMXG00000036020	polr3f	100	87.975	ENSSBOG00000018207	POLR3F	100	87.975	Saimiri_boliviensis_boliviensis
ENSAMXG00000036020	polr3f	100	69.470	ENSSHAG00000018160	POLR3F	100	70.662	Sarcophilus_harrisii
ENSAMXG00000036020	polr3f	100	93.631	ENSSFOG00015022433	polr3f	100	93.631	Scleropages_formosus
ENSAMXG00000036020	polr3f	100	89.557	ENSSMAG00000021029	polr3f	100	89.557	Scophthalmus_maximus
ENSAMXG00000036020	polr3f	100	80.380	ENSSDUG00000022435	polr3f	100	80.380	Seriola_dumerili
ENSAMXG00000036020	polr3f	100	91.456	ENSSLDG00000012761	polr3f	100	91.456	Seriola_lalandi_dorsalis
ENSAMXG00000036020	polr3f	100	79.430	ENSSARG00000006039	POLR3F	100	79.430	Sorex_araneus
ENSAMXG00000036020	polr3f	100	87.580	ENSSPUG00000001873	POLR3F	100	87.580	Sphenodon_punctatus
ENSAMXG00000036020	polr3f	100	83.544	ENSSPAG00000002092	polr3f	100	83.544	Stegastes_partitus
ENSAMXG00000036020	polr3f	100	87.025	ENSSSCG00000007095	POLR3F	100	92.241	Sus_scrofa
ENSAMXG00000036020	polr3f	100	89.809	ENSTGUG00000005839	POLR3F	100	89.809	Taeniopygia_guttata
ENSAMXG00000036020	polr3f	100	88.924	ENSTRUG00000012101	polr3f	100	88.924	Takifugu_rubripes
ENSAMXG00000036020	polr3f	100	88.291	ENSTNIG00000006456	polr3f	100	88.291	Tetraodon_nigroviridis
ENSAMXG00000036020	polr3f	100	71.203	ENSTBEG00000007921	POLR3F	100	71.203	Tupaia_belangeri
ENSAMXG00000036020	polr3f	100	87.025	ENSTTRG00000002580	POLR3F	100	87.025	Tursiops_truncatus
ENSAMXG00000036020	polr3f	53	89.157	ENSUAMG00000024166	POLR3F	100	89.157	Ursus_americanus
ENSAMXG00000036020	polr3f	100	87.025	ENSUMAG00000024944	POLR3F	100	87.025	Ursus_maritimus
ENSAMXG00000036020	polr3f	100	86.392	ENSVPAG00000009063	POLR3F	100	86.392	Vicugna_pacos
ENSAMXG00000036020	polr3f	100	87.025	ENSVVUG00000012925	POLR3F	100	87.025	Vulpes_vulpes
ENSAMXG00000036020	polr3f	100	87.261	ENSXETG00000024898	polr3f	100	87.261	Xenopus_tropicalis
ENSAMXG00000036020	polr3f	88	92.727	ENSXCOG00000010301	polr3f	100	92.727	Xiphophorus_couchianus
ENSAMXG00000036020	polr3f	100	90.506	ENSXMAG00000004604	polr3f	100	90.506	Xiphophorus_maculatus