EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000036064 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 2274 bases
Position: chr12:1251622-1253895
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000036324	MMR_HSR1	PF01926.23	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000055195	-	1725	-	ENSAMXP00000036324	574 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000036064's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000036064's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000036064	-	93	48.354	ENSAMXG00000042238	-	84	79.310
ENSAMXG00000036064	-	56	36.527	ENSAMXG00000025201	si:dkey-125e8.4	74	38.628
ENSAMXG00000036064	-	51	30.508	ENSAMXG00000036745	-	52	44.604

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000036064	-	61	34.426	ENSACLG00000001800	-	88	36.330	Astatotilapia_calliptera
ENSAMXG00000036064	-	60	36.339	ENSCVAG00000020148	-	69	38.989	Cyprinodon_variegatus
ENSAMXG00000036064	-	65	36.951	ENSDARG00000092823	si:dkeyp-67a8.4	69	39.394	Danio_rerio
ENSAMXG00000036064	-	60	35.775	ENSELUG00000004821	-	72	36.455	Esox_lucius
ENSAMXG00000036064	-	60	30.726	ENSFHEG00000010646	-	75	33.579	Fundulus_heteroclitus
ENSAMXG00000036064	-	63	36.340	ENSHBUG00000011192	-	71	38.768	Haplochromis_burtoni
ENSAMXG00000036064	-	56	36.826	ENSMAMG00000013262	-	58	38.732	Mastacembelus_armatus
ENSAMXG00000036064	-	58	35.135	ENSNBRG00000005577	-	74	36.275	Neolamprologus_brichardi
ENSAMXG00000036064	-	60	34.561	ENSORLG00000026065	-	79	46.405	Oryzias_latipes
ENSAMXG00000036064	-	64	34.908	ENSORLG00020017391	-	68	37.407	Oryzias_latipes_hni
ENSAMXG00000036064	-	59	36.571	ENSORLG00015018247	-	68	37.037	Oryzias_latipes_hsok
ENSAMXG00000036064	-	59	31.414	ENSOMEG00000000470	-	70	38.662	Oryzias_melastigma
ENSAMXG00000036064	-	54	52.632	ENSPKIG00000003142	-	54	52.632	Paramormyrops_kingsleyae
ENSAMXG00000036064	-	57	32.440	ENSPFOG00000001323	-	71	36.882	Poecilia_formosa
ENSAMXG00000036064	-	62	32.181	ENSPMEG00000008974	-	76	32.881	Poecilia_mexicana
ENSAMXG00000036064	-	60	34.454	ENSPREG00000006778	-	83	35.962	Poecilia_reticulata
ENSAMXG00000036064	-	79	53.636	ENSPNAG00000021813	-	87	63.934	Pygocentrus_nattereri
ENSAMXG00000036064	-	57	37.941	ENSPNAG00000018635	-	77	39.927	Pygocentrus_nattereri
ENSAMXG00000036064	-	57	33.819	ENSSLDG00000001762	-	61	36.923	Seriola_lalandi_dorsalis
ENSAMXG00000036064	-	60	36.415	ENSXMAG00000021016	-	68	38.603	Xiphophorus_maculatus