EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000036095 (Gene tree)
Gene ID: 103032972
Gene Symbol: -
Alias: -
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 2633 bases
Position: chr16:31666845-31669477
Accession: 103032972
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000030801	zf-U11-48K	PF05253.12	5.7e-17	1	2
ENSAMXP00000030801	zf-U11-48K	PF05253.12	5.7e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000033593	-	723	XM_007248008	ENSAMXP00000030801	240 (aa)	XP_007248070	UPI000440F724

Gene Model

Click here to download ENSAMXG00000036095's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000036095's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000036095	-	63	59.477	ENSAMXG00000038346	zgc:56699	83	57.895

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000036095	-	63	47.742	ENSAPOG00000000311	-	85	45.806	Acanthochromis_polyacanthus
ENSAMXG00000036095	-	65	45.161	ENSAPOG00000021951	-	84	43.871	Acanthochromis_polyacanthus
ENSAMXG00000036095	-	65	48.387	ENSACIG00000013400	zgc:56699	85	48.387	Amphilophus_citrinellus
ENSAMXG00000036095	-	65	45.806	ENSAOCG00000013650	-	84	45.806	Amphiprion_ocellaris
ENSAMXG00000036095	-	65	41.935	ENSAPEG00000006689	zgc:56699	81	41.290	Amphiprion_percula
ENSAMXG00000036095	-	65	54.839	ENSATEG00000024058	zgc:56699	83	54.839	Anabas_testudineus
ENSAMXG00000036095	-	67	46.914	ENSACLG00000023562	zgc:56699	80	46.914	Astatotilapia_calliptera
ENSAMXG00000036095	-	64	50.649	ENSCSEG00000021520	zgc:56699	70	50.649	Cynoglossus_semilaevis
ENSAMXG00000036095	-	62	46.309	ENSCVAG00000009972	zgc:56699	51	59.140	Cyprinodon_variegatus
ENSAMXG00000036095	-	64	57.419	ENSDARG00000000887	zgc:56699	82	57.419	Danio_rerio
ENSAMXG00000036095	-	68	65.031	ENSDARG00000099586	CR382383.2	88	65.031	Danio_rerio
ENSAMXG00000036095	-	65	62.420	ENSELUG00000003242	gtsf1	85	59.873	Esox_lucius
ENSAMXG00000036095	-	61	52.381	ENSFHEG00000006036	zgc:56699	75	45.270	Fundulus_heteroclitus
ENSAMXG00000036095	-	63	46.711	ENSGMOG00000007295	zgc:56699	98	46.711	Gadus_morhua
ENSAMXG00000036095	-	74	49.721	ENSGAFG00000020743	zgc:56699	97	49.721	Gambusia_affinis
ENSAMXG00000036095	-	67	45.679	ENSHBUG00000005327	zgc:56699	87	45.679	Haplochromis_burtoni
ENSAMXG00000036095	-	65	45.806	ENSHCOG00000010296	-	86	45.806	Hippocampus_comes
ENSAMXG00000036095	-	77	42.473	ENSIPUG00000011498	zgc:56699	98	39.785	Ictalurus_punctatus
ENSAMXG00000036095	-	65	51.613	ENSLBEG00000015981	zgc:56699	86	46.203	Labrus_bergylta
ENSAMXG00000036095	-	63	46.405	ENSLOCG00000004469	zgc:56699	99	47.333	Lepisosteus_oculatus
ENSAMXG00000036095	-	65	51.613	ENSMAMG00000001846	zgc:56699	85	51.613	Mastacembelus_armatus
ENSAMXG00000036095	-	67	46.914	ENSMZEG00005026479	zgc:56699	80	46.914	Maylandia_zebra
ENSAMXG00000036095	-	61	46.259	ENSMMOG00000017331	zgc:56699	50	60.215	Mola_mola
ENSAMXG00000036095	-	67	45.679	ENSNBRG00000006336	zgc:56699	87	45.679	Neolamprologus_brichardi
ENSAMXG00000036095	-	79	44.330	ENSONIG00000016720	zgc:56699	80	48.765	Oreochromis_niloticus
ENSAMXG00000036095	-	51	49.593	ENSORLG00000025877	-	73	49.593	Oryzias_latipes
ENSAMXG00000036095	-	61	45.205	ENSORLG00000015258	-	78	42.466	Oryzias_latipes
ENSAMXG00000036095	-	51	49.593	ENSORLG00020011013	-	73	49.593	Oryzias_latipes_hni
ENSAMXG00000036095	-	61	45.205	ENSORLG00020010990	-	78	42.000	Oryzias_latipes_hni
ENSAMXG00000036095	-	61	45.890	ENSORLG00015004961	zgc:56699	78	43.151	Oryzias_latipes_hsok
ENSAMXG00000036095	-	64	47.712	ENSOMEG00000021739	-	84	47.712	Oryzias_melastigma
ENSAMXG00000036095	-	61	51.701	ENSOMEG00000021773	-	79	51.701	Oryzias_melastigma
ENSAMXG00000036095	-	71	50.000	ENSPKIG00000017039	zgc:56699	94	50.000	Paramormyrops_kingsleyae
ENSAMXG00000036095	-	65	44.304	ENSPMGG00000023241	zgc:56699	82	43.671	Periophthalmus_magnuspinnatus
ENSAMXG00000036095	-	61	53.061	ENSPFOG00000009204	zgc:56699	87	52.500	Poecilia_formosa
ENSAMXG00000036095	-	61	48.649	ENSPLAG00000009088	zgc:56699	85	48.447	Poecilia_latipinna
ENSAMXG00000036095	-	61	53.061	ENSPMEG00000001443	zgc:56699	87	52.500	Poecilia_mexicana
ENSAMXG00000036095	-	65	53.750	ENSPREG00000000745	zgc:56699	87	53.750	Poecilia_reticulata
ENSAMXG00000036095	-	67	46.914	ENSPNYG00000002811	zgc:56699	87	46.914	Pundamilia_nyererei
ENSAMXG00000036095	-	70	59.763	ENSPNAG00000005165	zgc:56699	92	59.763	Pygocentrus_nattereri
ENSAMXG00000036095	-	65	56.688	ENSSFOG00015021600	zgc:56699	85	52.866	Scleropages_formosus
ENSAMXG00000036095	-	65	52.258	ENSSMAG00000020886	zgc:56699	83	52.258	Scophthalmus_maximus
ENSAMXG00000036095	-	65	55.484	ENSSDUG00000002033	zgc:56699	83	55.484	Seriola_dumerili
ENSAMXG00000036095	-	65	54.839	ENSSLDG00000014113	zgc:56699	83	54.839	Seriola_lalandi_dorsalis
ENSAMXG00000036095	-	61	52.740	ENSSPAG00000019854	-	99	45.251	Stegastes_partitus
ENSAMXG00000036095	-	55	49.254	ENSSPAG00000010005	-	83	47.761	Stegastes_partitus
ENSAMXG00000036095	-	66	41.509	ENSTRUG00000015537	zgc:56699	86	41.509	Takifugu_rubripes
ENSAMXG00000036095	-	57	47.059	ENSTNIG00000012515	zgc:56699	76	47.788	Tetraodon_nigroviridis
ENSAMXG00000036095	-	66	46.541	ENSXCOG00000014400	zgc:56699	76	44.654	Xiphophorus_couchianus
ENSAMXG00000036095	-	66	51.572	ENSXMAG00000011692	zgc:56699	86	51.572	Xiphophorus_maculatus