EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000036118 (Gene tree)
Gene ID: 103043816
Gene Symbol: polr1d
Alias: im:7162148|zgc:136449
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 40805 bases
Position: chr24:20106238-20147042
Accession: 103043816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000030463	RNA_pol_L_2	PF13656.6	1.7e-28	1	1
ENSAMXP00000036034	RNA_pol_L_2	PF13656.6	2.7e-28	1	1
ENSAMXP00000030463	RNA_pol_L	PF01193.24	3.7e-13	1	1
ENSAMXP00000036034	RNA_pol_L	PF01193.24	5.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000041656	-	1158	XM_007228401	ENSAMXP00000030463	115 (aa)	XP_007228463	UPI000BBDF409
ENSAMXT00000036051	-	3535	-	ENSAMXP00000036034	138 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000036118's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03020	RNA polymerase	KEGG
amex04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000036118's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000036118	polr1d	91	32.381	ENSAMXG00000007517	polr2j	86	32.381

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000036118	polr1d	92	68.868	ENSG00000186184	POLR1D	90	70.192	Homo_sapiens
ENSAMXG00000036118	polr1d	90	75.728	ENSAPOG00000021882	polr1d	95	77.228	Acanthochromis_polyacanthus
ENSAMXG00000036118	polr1d	92	69.811	ENSAMEG00000019095	POLR1D	85	69.811	Ailuropoda_melanoleuca
ENSAMXG00000036118	polr1d	98	73.684	ENSACIG00000013328	polr1d	99	73.684	Amphilophus_citrinellus
ENSAMXG00000036118	polr1d	98	77.876	ENSAOCG00000018500	polr1d	99	77.876	Amphiprion_ocellaris
ENSAMXG00000036118	polr1d	98	76.991	ENSAPEG00000009489	polr1d	99	76.991	Amphiprion_percula
ENSAMXG00000036118	polr1d	98	74.336	ENSATEG00000019322	polr1d	99	74.336	Anabas_testudineus
ENSAMXG00000036118	polr1d	90	67.308	ENSACAG00000015753	POLR1D	90	67.308	Anolis_carolinensis
ENSAMXG00000036118	polr1d	92	68.868	ENSANAG00000024486	POLR1D	80	68.868	Aotus_nancymaae
ENSAMXG00000036118	polr1d	98	76.991	ENSACLG00000023805	polr1d	99	76.991	Astatotilapia_calliptera
ENSAMXG00000036118	polr1d	92	69.811	ENSBTAG00000033252	-	80	69.811	Bos_taurus
ENSAMXG00000036118	polr1d	92	69.811	ENSBTAG00000008642	POLR1D	80	69.811	Bos_taurus
ENSAMXG00000036118	polr1d	57	46.154	WBGene00010230	rpac-19	60	39.080	Caenorhabditis_elegans
ENSAMXG00000036118	polr1d	92	68.868	ENSCJAG00000044669	POLR1D	80	68.868	Callithrix_jacchus
ENSAMXG00000036118	polr1d	92	69.811	ENSCAFG00000006755	POLR1D	80	69.811	Canis_familiaris
ENSAMXG00000036118	polr1d	92	68.868	ENSCHIG00000021910	POLR1D	80	68.868	Capra_hircus
ENSAMXG00000036118	polr1d	88	73.267	ENSTSYG00000026817	-	76	73.267	Carlito_syrichta
ENSAMXG00000036118	polr1d	93	58.716	ENSTSYG00000034852	-	90	58.716	Carlito_syrichta
ENSAMXG00000036118	polr1d	55	53.968	ENSCAPG00000006058	-	64	53.968	Cavia_aperea
ENSAMXG00000036118	polr1d	55	53.968	ENSCPOG00000030450	-	64	53.968	Cavia_porcellus
ENSAMXG00000036118	polr1d	92	69.811	ENSCCAG00000021349	-	80	69.811	Cebus_capucinus
ENSAMXG00000036118	polr1d	92	50.943	ENSCCAG00000020191	-	77	50.943	Cebus_capucinus
ENSAMXG00000036118	polr1d	88	61.386	ENSCATG00000022900	-	75	61.386	Cercocebus_atys
ENSAMXG00000036118	polr1d	92	68.868	ENSCATG00000030710	-	80	68.868	Cercocebus_atys
ENSAMXG00000036118	polr1d	92	67.925	ENSCLAG00000017623	POLR1D	85	67.925	Chinchilla_lanigera
ENSAMXG00000036118	polr1d	87	70.000	ENSCPBG00000004719	POLR1D	99	70.000	Chrysemys_picta_bellii
ENSAMXG00000036118	polr1d	90	70.192	ENSCANG00000028632	-	78	70.192	Colobus_angolensis_palliatus
ENSAMXG00000036118	polr1d	92	64.151	ENSCANG00000037694	-	80	64.151	Colobus_angolensis_palliatus
ENSAMXG00000036118	polr1d	92	69.811	ENSCGRG00001021251	Polr1d	80	69.811	Cricetulus_griseus_chok1gshd
ENSAMXG00000036118	polr1d	92	69.811	ENSCGRG00000011639	Polr1d	80	69.811	Cricetulus_griseus_crigri
ENSAMXG00000036118	polr1d	91	77.143	ENSCSEG00000018268	polr1d	94	75.455	Cynoglossus_semilaevis
ENSAMXG00000036118	polr1d	98	77.876	ENSCVAG00000018527	polr1d	99	77.876	Cyprinodon_variegatus
ENSAMXG00000036118	polr1d	97	75.676	ENSDARG00000037570	polr1d	98	75.676	Danio_rerio
ENSAMXG00000036118	polr1d	92	66.038	ENSDNOG00000046247	-	79	66.038	Dasypus_novemcinctus
ENSAMXG00000036118	polr1d	92	67.925	ENSDNOG00000043676	-	80	67.925	Dasypus_novemcinctus
ENSAMXG00000036118	polr1d	92	69.811	ENSDORG00000029155	Polr1d	80	69.811	Dipodomys_ordii
ENSAMXG00000036118	polr1d	74	47.059	FBgn0086447	l(2)37Cg	80	47.059	Drosophila_melanogaster
ENSAMXG00000036118	polr1d	92	67.925	ENSETEG00000012797	POLR1D	85	67.925	Echinops_telfairi
ENSAMXG00000036118	polr1d	77	68.182	ENSEBUG00000011748	polr1d	60	69.767	Eptatretus_burgeri
ENSAMXG00000036118	polr1d	92	69.811	ENSEASG00005022487	POLR1D	82	69.811	Equus_asinus_asinus
ENSAMXG00000036118	polr1d	92	69.811	ENSEEUG00000013144	POLR1D	85	69.811	Erinaceus_europaeus
ENSAMXG00000036118	polr1d	98	77.876	ENSELUG00000005105	rpac2	99	77.876	Esox_lucius
ENSAMXG00000036118	polr1d	92	69.811	ENSFCAG00000030162	POLR1D	80	69.811	Felis_catus
ENSAMXG00000036118	polr1d	87	75.000	ENSFALG00000011463	POLR1D	99	75.000	Ficedula_albicollis
ENSAMXG00000036118	polr1d	92	66.981	ENSFDAG00000004463	POLR1D	80	66.981	Fukomys_damarensis
ENSAMXG00000036118	polr1d	98	74.336	ENSFHEG00000015410	polr1d	98	74.336	Fundulus_heteroclitus
ENSAMXG00000036118	polr1d	60	65.217	ENSGALG00000007470	POLR1D	68	65.217	Gallus_gallus
ENSAMXG00000036118	polr1d	98	75.221	ENSGAFG00000001693	polr1d	99	75.221	Gambusia_affinis
ENSAMXG00000036118	polr1d	91	77.143	ENSGACG00000018585	polr1d	89	77.143	Gasterosteus_aculeatus
ENSAMXG00000036118	polr1d	98	69.912	ENSGAGG00000008503	POLR1D	99	69.912	Gopherus_agassizii
ENSAMXG00000036118	polr1d	92	68.868	ENSGGOG00000004235	POLR1D	80	68.868	Gorilla_gorilla
ENSAMXG00000036118	polr1d	98	76.991	ENSHBUG00000002111	polr1d	99	76.991	Haplochromis_burtoni
ENSAMXG00000036118	polr1d	91	66.667	ENSHGLG00000003202	POLR1D	79	66.667	Heterocephalus_glaber_female
ENSAMXG00000036118	polr1d	91	66.667	ENSHGLG00100009393	POLR1D	79	66.667	Heterocephalus_glaber_male
ENSAMXG00000036118	polr1d	98	73.451	ENSHCOG00000003258	polr1d	99	73.451	Hippocampus_comes
ENSAMXG00000036118	polr1d	100	86.087	ENSIPUG00000014810	polr1d	100	86.087	Ictalurus_punctatus
ENSAMXG00000036118	polr1d	92	68.868	ENSSTOG00000013877	POLR1D	80	68.868	Ictidomys_tridecemlineatus
ENSAMXG00000036118	polr1d	92	53.774	ENSJJAG00000021667	-	62	53.774	Jaculus_jaculus
ENSAMXG00000036118	polr1d	92	68.868	ENSJJAG00000022671	-	87	70.192	Jaculus_jaculus
ENSAMXG00000036118	polr1d	98	73.451	ENSKMAG00000015256	polr1d	99	73.451	Kryptolebias_marmoratus
ENSAMXG00000036118	polr1d	98	76.106	ENSLBEG00000015919	polr1d	99	76.106	Labrus_bergylta
ENSAMXG00000036118	polr1d	91	67.619	ENSLACG00000006810	POLR1D	88	67.619	Latimeria_chalumnae
ENSAMXG00000036118	polr1d	63	82.192	ENSLOCG00000014976	polr1d	99	82.192	Lepisosteus_oculatus
ENSAMXG00000036118	polr1d	92	69.811	ENSLAFG00000032290	POLR1D	80	69.811	Loxodonta_africana
ENSAMXG00000036118	polr1d	92	68.868	ENSMFAG00000045264	POLR1D	82	68.868	Macaca_fascicularis
ENSAMXG00000036118	polr1d	68	66.667	ENSMMUG00000041570	-	70	66.667	Macaca_mulatta
ENSAMXG00000036118	polr1d	90	70.192	ENSMMUG00000020386	POLR1D	90	70.192	Macaca_mulatta
ENSAMXG00000036118	polr1d	92	68.868	ENSMNEG00000008630	-	80	68.868	Macaca_nemestrina
ENSAMXG00000036118	polr1d	79	59.341	ENSMNEG00000038120	-	70	59.341	Macaca_nemestrina
ENSAMXG00000036118	polr1d	92	68.868	ENSMLEG00000041048	-	80	68.868	Mandrillus_leucophaeus
ENSAMXG00000036118	polr1d	88	62.376	ENSMLEG00000032251	-	75	62.376	Mandrillus_leucophaeus
ENSAMXG00000036118	polr1d	89	75.490	ENSMAMG00000014834	polr1d	92	78.571	Mastacembelus_armatus
ENSAMXG00000036118	polr1d	88	77.228	ENSMZEG00005006638	polr1d	87	79.592	Maylandia_zebra
ENSAMXG00000036118	polr1d	85	73.469	ENSMGAG00000005322	POLR1D	90	73.469	Meleagris_gallopavo
ENSAMXG00000036118	polr1d	92	69.811	ENSMAUG00000001946	Polr1d	80	69.811	Mesocricetus_auratus
ENSAMXG00000036118	polr1d	92	67.925	ENSMICG00000016883	-	80	67.925	Microcebus_murinus
ENSAMXG00000036118	polr1d	90	56.731	ENSMICG00000007349	-	79	55.660	Microcebus_murinus
ENSAMXG00000036118	polr1d	92	69.811	ENSMOCG00000021288	Polr1d	80	69.811	Microtus_ochrogaster
ENSAMXG00000036118	polr1d	98	77.876	ENSMMOG00000009605	polr1d	99	77.876	Mola_mola
ENSAMXG00000036118	polr1d	95	72.477	ENSMODG00000023881	POLR1D	96	72.477	Monodelphis_domestica
ENSAMXG00000036118	polr1d	98	72.566	ENSMALG00000010652	polr1d	99	72.566	Monopterus_albus
ENSAMXG00000036118	polr1d	92	67.925	MGP_CAROLIEiJ_G0028034	Polr1d	80	67.925	Mus_caroli
ENSAMXG00000036118	polr1d	95	66.972	ENSMUSG00000029642	Polr1d	82	66.972	Mus_musculus
ENSAMXG00000036118	polr1d	95	66.972	MGP_PahariEiJ_G0024600	Polr1d	82	66.972	Mus_pahari
ENSAMXG00000036118	polr1d	95	66.055	MGP_SPRETEiJ_G0029032	Polr1d	82	66.055	Mus_spretus
ENSAMXG00000036118	polr1d	92	64.151	ENSMLUG00000004118	-	80	64.151	Myotis_lucifugus
ENSAMXG00000036118	polr1d	92	68.868	ENSMLUG00000027169	-	80	68.868	Myotis_lucifugus
ENSAMXG00000036118	polr1d	97	67.857	ENSNGAG00000006014	Polr1d	97	67.857	Nannospalax_galili
ENSAMXG00000036118	polr1d	98	76.991	ENSNBRG00000020327	polr1d	99	76.991	Neolamprologus_brichardi
ENSAMXG00000036118	polr1d	92	68.868	ENSNLEG00000000358	POLR1D	80	68.868	Nomascus_leucogenys
ENSAMXG00000036118	polr1d	92	53.774	ENSODEG00000014801	-	77	53.774	Octodon_degus
ENSAMXG00000036118	polr1d	92	67.925	ENSODEG00000005294	-	80	67.925	Octodon_degus
ENSAMXG00000036118	polr1d	99	71.930	ENSOANG00000008708	-	97	79.048	Ornithorhynchus_anatinus
ENSAMXG00000036118	polr1d	92	68.868	ENSOCUG00000015706	POLR1D	65	68.868	Oryctolagus_cuniculus
ENSAMXG00000036118	polr1d	98	71.681	ENSORLG00000010257	polr1d	99	71.681	Oryzias_latipes
ENSAMXG00000036118	polr1d	98	71.681	ENSORLG00020000533	polr1d	76	71.681	Oryzias_latipes_hni
ENSAMXG00000036118	polr1d	98	72.566	ENSORLG00015013267	polr1d	75	72.566	Oryzias_latipes_hsok
ENSAMXG00000036118	polr1d	98	70.796	ENSOMEG00000014912	polr1d	75	70.796	Oryzias_melastigma
ENSAMXG00000036118	polr1d	92	67.925	ENSOGAG00000014601	POLR1D	80	67.925	Otolemur_garnettii
ENSAMXG00000036118	polr1d	92	68.868	ENSOARG00000017005	POLR1D	82	68.868	Ovis_aries
ENSAMXG00000036118	polr1d	92	68.868	ENSPPAG00000028138	POLR1D	80	68.868	Pan_paniscus
ENSAMXG00000036118	polr1d	92	69.811	ENSPPRG00000003381	POLR1D	80	69.811	Panthera_pardus
ENSAMXG00000036118	polr1d	92	69.811	ENSPTIG00000018137	POLR1D	80	69.811	Panthera_tigris_altaica
ENSAMXG00000036118	polr1d	92	68.868	ENSPTRG00000005734	POLR1D	80	68.868	Pan_troglodytes
ENSAMXG00000036118	polr1d	88	59.406	ENSPANG00000035051	-	75	59.406	Papio_anubis
ENSAMXG00000036118	polr1d	92	68.868	ENSPANG00000020259	-	80	68.868	Papio_anubis
ENSAMXG00000036118	polr1d	88	81.188	ENSPKIG00000021891	polr1d	100	58.268	Paramormyrops_kingsleyae
ENSAMXG00000036118	polr1d	98	69.912	ENSPSIG00000011822	POLR1D	88	69.912	Pelodiscus_sinensis
ENSAMXG00000036118	polr1d	98	62.832	ENSPMGG00000012998	POLR1D	83	62.832	Periophthalmus_magnuspinnatus
ENSAMXG00000036118	polr1d	98	72.566	ENSPMGG00000010359	polr1d	98	72.566	Periophthalmus_magnuspinnatus
ENSAMXG00000036118	polr1d	92	67.925	ENSPEMG00000006336	-	82	67.925	Peromyscus_maniculatus_bairdii
ENSAMXG00000036118	polr1d	94	59.259	ENSPMAG00000004228	polr1d	91	59.259	Petromyzon_marinus
ENSAMXG00000036118	polr1d	95	71.560	ENSPCIG00000001673	POLR1D	96	71.560	Phascolarctos_cinereus
ENSAMXG00000036118	polr1d	98	76.106	ENSPFOG00000023343	polr1d	100	75.862	Poecilia_formosa
ENSAMXG00000036118	polr1d	98	76.106	ENSPLAG00000009675	polr1d	99	76.106	Poecilia_latipinna
ENSAMXG00000036118	polr1d	98	76.106	ENSPMEG00000004628	polr1d	99	76.106	Poecilia_mexicana
ENSAMXG00000036118	polr1d	98	76.106	ENSPREG00000022032	polr1d	99	76.106	Poecilia_reticulata
ENSAMXG00000036118	polr1d	92	66.981	ENSPCOG00000028175	POLR1D	80	66.981	Propithecus_coquereli
ENSAMXG00000036118	polr1d	98	76.991	ENSPNYG00000000107	polr1d	99	76.991	Pundamilia_nyererei
ENSAMXG00000036118	polr1d	95	87.156	ENSPNAG00000001512	polr1d	96	85.088	Pygocentrus_nattereri
ENSAMXG00000036118	polr1d	92	64.151	ENSRBIG00000000336	-	80	64.151	Rhinopithecus_bieti
ENSAMXG00000036118	polr1d	92	68.868	ENSRBIG00000036378	-	80	68.868	Rhinopithecus_bieti
ENSAMXG00000036118	polr1d	92	65.094	ENSRROG00000026751	-	80	65.094	Rhinopithecus_roxellana
ENSAMXG00000036118	polr1d	92	68.868	ENSRROG00000042232	-	80	68.868	Rhinopithecus_roxellana
ENSAMXG00000036118	polr1d	87	53.000	YNL113W	RPC19	68	54.082	Saccharomyces_cerevisiae
ENSAMXG00000036118	polr1d	92	68.868	ENSSBOG00000028482	-	80	68.868	Saimiri_boliviensis_boliviensis
ENSAMXG00000036118	polr1d	83	66.316	ENSSBOG00000030146	-	81	60.177	Saimiri_boliviensis_boliviensis
ENSAMXG00000036118	polr1d	94	70.370	ENSSHAG00000001190	POLR1D	84	70.370	Sarcophilus_harrisii
ENSAMXG00000036118	polr1d	100	78.261	ENSSFOG00015011375	polr1d	100	78.261	Scleropages_formosus
ENSAMXG00000036118	polr1d	98	75.221	ENSSMAG00000011861	polr1d	99	75.221	Scophthalmus_maximus
ENSAMXG00000036118	polr1d	98	74.336	ENSSDUG00000011930	polr1d	99	74.336	Seriola_dumerili
ENSAMXG00000036118	polr1d	88	74.257	ENSSLDG00000023871	polr1d	86	74.257	Seriola_lalandi_dorsalis
ENSAMXG00000036118	polr1d	92	69.811	ENSSARG00000007840	POLR1D	80	69.811	Sorex_araneus
ENSAMXG00000036118	polr1d	99	64.348	ENSSPUG00000005786	POLR1D	95	67.568	Sphenodon_punctatus
ENSAMXG00000036118	polr1d	98	76.991	ENSSPAG00000011764	polr1d	99	76.991	Stegastes_partitus
ENSAMXG00000036118	polr1d	90	69.231	ENSSSCG00000009310	POLR1D	78	69.231	Sus_scrofa
ENSAMXG00000036118	polr1d	83	75.000	ENSTGUG00000005450	POLR1D	100	75.000	Taeniopygia_guttata
ENSAMXG00000036118	polr1d	93	75.701	ENSTRUG00000019741	polr1d	94	75.701	Takifugu_rubripes
ENSAMXG00000036118	polr1d	92	67.925	ENSTBEG00000007006	POLR1D	85	67.925	Tupaia_belangeri
ENSAMXG00000036118	polr1d	92	69.811	ENSUAMG00000011413	POLR1D	80	69.811	Ursus_americanus
ENSAMXG00000036118	polr1d	92	69.811	ENSUMAG00000016968	POLR1D	83	69.811	Ursus_maritimus
ENSAMXG00000036118	polr1d	92	69.811	ENSVVUG00000009216	POLR1D	80	69.811	Vulpes_vulpes
ENSAMXG00000036118	polr1d	87	78.000	ENSXCOG00000011731	polr1d	77	78.000	Xiphophorus_couchianus
ENSAMXG00000036118	polr1d	87	78.000	ENSXMAG00000017538	polr1d	77	78.000	Xiphophorus_maculatus