EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000036241 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 14243 bases
Position: chr13:7077337-7091579
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000043932	zf-C2H2	PF00096.26	1.9e-57	1	9
ENSAMXP00000043932	zf-C2H2	PF00096.26	1.9e-57	2	9
ENSAMXP00000043932	zf-C2H2	PF00096.26	1.9e-57	3	9
ENSAMXP00000043932	zf-C2H2	PF00096.26	1.9e-57	4	9
ENSAMXP00000043932	zf-C2H2	PF00096.26	1.9e-57	5	9
ENSAMXP00000043932	zf-C2H2	PF00096.26	1.9e-57	6	9
ENSAMXP00000043932	zf-C2H2	PF00096.26	1.9e-57	7	9
ENSAMXP00000043932	zf-C2H2	PF00096.26	1.9e-57	8	9
ENSAMXP00000043932	zf-C2H2	PF00096.26	1.9e-57	9	9
ENSAMXP00000043932	zf-met	PF12874.7	1.4e-10	1	2
ENSAMXP00000043932	zf-met	PF12874.7	1.4e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000032343	-	1083	-	ENSAMXP00000043932	360 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000036241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000036241's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000036241	-	82	43.299	ENSAMXG00000035246	-	66	43.299
ENSAMXG00000036241	-	83	43.564	ENSAMXG00000037544	GFI1B	73	43.564
ENSAMXG00000036241	-	93	58.912	ENSAMXG00000040677	-	92	59.623
ENSAMXG00000036241	-	82	57.914	ENSAMXG00000029109	-	86	57.914
ENSAMXG00000036241	-	87	59.868	ENSAMXG00000042167	-	85	59.868
ENSAMXG00000036241	-	82	63.475	ENSAMXG00000035949	-	74	63.475
ENSAMXG00000036241	-	84	32.273	ENSAMXG00000008771	PRDM15	51	33.161
ENSAMXG00000036241	-	88	68.627	ENSAMXG00000039879	-	97	69.048
ENSAMXG00000036241	-	92	55.272	ENSAMXG00000029960	-	98	58.170
ENSAMXG00000036241	-	93	60.000	ENSAMXG00000035920	-	92	68.919
ENSAMXG00000036241	-	90	52.961	ENSAMXG00000012873	-	96	56.228
ENSAMXG00000036241	-	88	60.635	ENSAMXG00000036233	-	91	63.006
ENSAMXG00000036241	-	82	55.085	ENSAMXG00000043302	-	72	51.852
ENSAMXG00000036241	-	82	63.140	ENSAMXG00000038453	-	82	63.140
ENSAMXG00000036241	-	82	58.282	ENSAMXG00000030530	-	98	64.570
ENSAMXG00000036241	-	90	63.298	ENSAMXG00000039700	-	91	63.298
ENSAMXG00000036241	-	84	65.789	ENSAMXG00000009558	-	93	67.577
ENSAMXG00000036241	-	88	58.824	ENSAMXG00000033201	-	98	59.211
ENSAMXG00000036241	-	92	65.686	ENSAMXG00000040212	-	90	65.686
ENSAMXG00000036241	-	84	39.796	ENSAMXG00000034873	-	85	39.796
ENSAMXG00000036241	-	82	66.554	ENSAMXG00000039162	-	95	66.549
ENSAMXG00000036241	-	91	58.333	ENSAMXG00000043541	-	82	53.443
ENSAMXG00000036241	-	89	60.215	ENSAMXG00000032841	-	85	60.215
ENSAMXG00000036241	-	80	48.000	ENSAMXG00000032845	-	55	41.837
ENSAMXG00000036241	-	82	65.455	ENSAMXG00000032457	-	91	64.626
ENSAMXG00000036241	-	83	57.642	ENSAMXG00000029161	-	89	57.642
ENSAMXG00000036241	-	83	62.112	ENSAMXG00000032212	-	86	62.112
ENSAMXG00000036241	-	85	62.745	ENSAMXG00000009776	-	97	63.100
ENSAMXG00000036241	-	89	56.598	ENSAMXG00000013274	-	91	59.609
ENSAMXG00000036241	-	81	52.727	ENSAMXG00000034934	-	79	45.070
ENSAMXG00000036241	-	84	62.963	ENSAMXG00000035683	-	96	62.963
ENSAMXG00000036241	-	85	60.777	ENSAMXG00000034402	-	95	60.544
ENSAMXG00000036241	-	83	67.320	ENSAMXG00000024978	-	97	71.038
ENSAMXG00000036241	-	85	42.902	ENSAMXG00000012589	-	85	42.902
ENSAMXG00000036241	-	83	59.184	ENSAMXG00000037326	-	93	59.184
ENSAMXG00000036241	-	84	44.595	ENSAMXG00000038235	snai2	52	44.595
ENSAMXG00000036241	-	84	38.249	ENSAMXG00000042191	zbtb47a	85	37.968
ENSAMXG00000036241	-	93	54.444	ENSAMXG00000029783	-	87	54.444
ENSAMXG00000036241	-	85	57.426	ENSAMXG00000038280	-	87	56.701
ENSAMXG00000036241	-	88	53.517	ENSAMXG00000038284	-	94	54.286
ENSAMXG00000036241	-	87	44.348	ENSAMXG00000007973	-	91	45.695
ENSAMXG00000036241	-	82	66.667	ENSAMXG00000035145	-	63	66.667
ENSAMXG00000036241	-	89	53.618	ENSAMXG00000026143	-	96	54.575
ENSAMXG00000036241	-	89	36.011	ENSAMXG00000024907	znf319b	85	37.580
ENSAMXG00000036241	-	82	64.706	ENSAMXG00000031900	-	91	65.957
ENSAMXG00000036241	-	90	58.824	ENSAMXG00000010805	-	96	59.804
ENSAMXG00000036241	-	83	64.310	ENSAMXG00000040630	-	97	64.904
ENSAMXG00000036241	-	82	60.630	ENSAMXG00000043291	-	62	60.630
ENSAMXG00000036241	-	98	59.807	ENSAMXG00000038324	-	69	62.712
ENSAMXG00000036241	-	91	53.959	ENSAMXG00000038325	-	95	55.280
ENSAMXG00000036241	-	86	59.935	ENSAMXG00000030742	-	99	59.935
ENSAMXG00000036241	-	84	57.513	ENSAMXG00000012604	-	97	57.513
ENSAMXG00000036241	-	84	65.972	ENSAMXG00000025455	-	99	65.580
ENSAMXG00000036241	-	88	62.805	ENSAMXG00000025452	-	95	63.696
ENSAMXG00000036241	-	89	60.961	ENSAMXG00000031794	-	100	61.481
ENSAMXG00000036241	-	80	63.787	ENSAMXG00000039182	-	64	63.787
ENSAMXG00000036241	-	88	57.246	ENSAMXG00000038905	-	90	57.246
ENSAMXG00000036241	-	84	61.806	ENSAMXG00000010078	-	86	61.806
ENSAMXG00000036241	-	85	66.775	ENSAMXG00000029178	-	96	66.993
ENSAMXG00000036241	-	82	65.359	ENSAMXG00000042774	-	95	65.359
ENSAMXG00000036241	-	81	43.750	ENSAMXG00000033001	-	74	43.750
ENSAMXG00000036241	-	82	66.447	ENSAMXG00000039744	-	99	66.096
ENSAMXG00000036241	-	89	70.290	ENSAMXG00000035690	-	75	61.491
ENSAMXG00000036241	-	82	60.930	ENSAMXG00000031489	-	95	62.324
ENSAMXG00000036241	-	92	60.201	ENSAMXG00000036915	-	96	60.201
ENSAMXG00000036241	-	79	65.320	ENSAMXG00000041725	-	88	63.281
ENSAMXG00000036241	-	92	68.657	ENSAMXG00000041721	-	81	68.657
ENSAMXG00000036241	-	82	58.000	ENSAMXG00000030963	-	74	58.000
ENSAMXG00000036241	-	82	66.549	ENSAMXG00000036762	-	96	66.549
ENSAMXG00000036241	-	93	63.758	ENSAMXG00000039004	-	88	63.758
ENSAMXG00000036241	-	81	57.589	ENSAMXG00000044028	-	97	64.641
ENSAMXG00000036241	-	82	41.584	ENSAMXG00000015228	-	58	41.584
ENSAMXG00000036241	-	89	65.686	ENSAMXG00000041128	-	89	65.306
ENSAMXG00000036241	-	82	63.793	ENSAMXG00000029828	-	95	63.793
ENSAMXG00000036241	-	90	62.791	ENSAMXG00000031307	-	68	62.791
ENSAMXG00000036241	-	86	60.544	ENSAMXG00000038536	-	84	60.544
ENSAMXG00000036241	-	85	35.185	ENSAMXG00000029059	-	61	35.263
ENSAMXG00000036241	-	87	48.370	ENSAMXG00000035127	-	90	43.636
ENSAMXG00000036241	-	83	58.940	ENSAMXG00000037143	-	93	57.912
ENSAMXG00000036241	-	91	60.131	ENSAMXG00000039016	-	78	59.184
ENSAMXG00000036241	-	82	66.892	ENSAMXG00000030911	-	67	65.724
ENSAMXG00000036241	-	91	47.701	ENSAMXG00000013492	-	98	50.185
ENSAMXG00000036241	-	83	65.882	ENSAMXG00000007092	-	99	68.205
ENSAMXG00000036241	-	84	54.924	ENSAMXG00000034344	-	74	54.924
ENSAMXG00000036241	-	84	40.741	ENSAMXG00000005882	znf131	50	40.741
ENSAMXG00000036241	-	82	64.481	ENSAMXG00000031646	-	94	64.490
ENSAMXG00000036241	-	86	44.595	ENSAMXG00000007441	-	57	44.595
ENSAMXG00000036241	-	89	61.562	ENSAMXG00000039432	-	100	61.301
ENSAMXG00000036241	-	89	57.143	ENSAMXG00000043978	-	85	56.463
ENSAMXG00000036241	-	89	56.579	ENSAMXG00000032237	-	94	56.579
ENSAMXG00000036241	-	87	34.848	ENSAMXG00000038085	scrt1a	53	34.848
ENSAMXG00000036241	-	82	62.553	ENSAMXG00000033013	-	85	61.458
ENSAMXG00000036241	-	81	59.468	ENSAMXG00000036633	-	62	59.344
ENSAMXG00000036241	-	93	53.561	ENSAMXG00000039770	-	96	56.579
ENSAMXG00000036241	-	90	53.994	ENSAMXG00000001626	-	95	62.500
ENSAMXG00000036241	-	91	62.941	ENSAMXG00000041609	-	99	62.941
ENSAMXG00000036241	-	89	60.312	ENSAMXG00000003002	-	92	61.165
ENSAMXG00000036241	-	87	60.714	ENSAMXG00000026142	-	92	60.714
ENSAMXG00000036241	-	93	54.225	ENSAMXG00000026144	-	91	58.333
ENSAMXG00000036241	-	91	53.823	ENSAMXG00000009563	-	99	56.013
ENSAMXG00000036241	-	91	64.072	ENSAMXG00000031496	-	87	64.072
ENSAMXG00000036241	-	82	68.301	ENSAMXG00000043251	-	95	68.367
ENSAMXG00000036241	-	84	46.429	ENSAMXG00000033252	-	94	46.429
ENSAMXG00000036241	-	89	55.189	ENSAMXG00000019489	-	93	55.189
ENSAMXG00000036241	-	88	36.449	ENSAMXG00000025761	-	87	36.449
ENSAMXG00000036241	-	92	61.754	ENSAMXG00000042275	-	98	60.884
ENSAMXG00000036241	-	81	36.667	ENSAMXG00000044034	-	58	39.286
ENSAMXG00000036241	-	82	68.841	ENSAMXG00000018161	-	95	68.841
ENSAMXG00000036241	-	82	68.056	ENSAMXG00000035809	-	99	68.440
ENSAMXG00000036241	-	82	65.359	ENSAMXG00000031009	-	85	64.931
ENSAMXG00000036241	-	85	67.987	ENSAMXG00000038636	-	98	67.905
ENSAMXG00000036241	-	82	67.568	ENSAMXG00000011804	-	86	67.254
ENSAMXG00000036241	-	91	31.609	ENSAMXG00000035525	znf646	85	35.507
ENSAMXG00000036241	-	82	42.373	ENSAMXG00000016921	znf341	53	42.373
ENSAMXG00000036241	-	87	60.443	ENSAMXG00000037923	-	99	60.197
ENSAMXG00000036241	-	91	62.037	ENSAMXG00000033124	-	72	62.037
ENSAMXG00000036241	-	95	51.131	ENSAMXG00000043178	-	72	57.516
ENSAMXG00000036241	-	82	66.090	ENSAMXG00000008613	-	98	65.704
ENSAMXG00000036241	-	86	60.417	ENSAMXG00000029518	-	53	60.417
ENSAMXG00000036241	-	85	60.909	ENSAMXG00000042784	-	96	60.909
ENSAMXG00000036241	-	87	40.000	ENSAMXG00000042624	SCRT1	59	34.259
ENSAMXG00000036241	-	89	59.770	ENSAMXG00000031844	-	98	56.274
ENSAMXG00000036241	-	91	60.131	ENSAMXG00000035437	-	100	60.131
ENSAMXG00000036241	-	96	61.364	ENSAMXG00000044110	-	91	61.364
ENSAMXG00000036241	-	86	63.975	ENSAMXG00000032619	-	99	63.975
ENSAMXG00000036241	-	82	70.690	ENSAMXG00000000353	-	93	70.690
ENSAMXG00000036241	-	88	47.120	ENSAMXG00000014745	-	90	47.120
ENSAMXG00000036241	-	82	66.667	ENSAMXG00000031501	-	88	67.254
ENSAMXG00000036241	-	90	43.704	ENSAMXG00000044096	-	87	43.704
ENSAMXG00000036241	-	87	60.071	ENSAMXG00000037981	-	74	63.212
ENSAMXG00000036241	-	84	53.125	ENSAMXG00000035286	si:ch1073-224n8.1	83	53.125
ENSAMXG00000036241	-	90	49.062	ENSAMXG00000034857	-	71	49.062
ENSAMXG00000036241	-	87	51.497	ENSAMXG00000034333	-	89	54.737
ENSAMXG00000036241	-	82	63.946	ENSAMXG00000042593	-	92	63.946
ENSAMXG00000036241	-	86	62.544	ENSAMXG00000036849	-	86	61.356
ENSAMXG00000036241	-	91	37.179	ENSAMXG00000033299	-	78	37.179
ENSAMXG00000036241	-	97	55.625	ENSAMXG00000040806	-	97	57.229
ENSAMXG00000036241	-	91	64.767	ENSAMXG00000037717	-	94	64.767
ENSAMXG00000036241	-	89	60.472	ENSAMXG00000039977	-	97	64.966
ENSAMXG00000036241	-	82	51.899	ENSAMXG00000038122	-	93	52.500
ENSAMXG00000036241	-	89	62.162	ENSAMXG00000034958	-	95	63.551
ENSAMXG00000036241	-	82	72.941	ENSAMXG00000033500	-	92	72.941
ENSAMXG00000036241	-	91	55.605	ENSAMXG00000017959	-	98	57.329
ENSAMXG00000036241	-	82	67.427	ENSAMXG00000025965	-	94	67.347
ENSAMXG00000036241	-	82	65.359	ENSAMXG00000036567	-	76	65.278
ENSAMXG00000036241	-	83	66.892	ENSAMXG00000041404	-	96	65.986
ENSAMXG00000036241	-	93	52.613	ENSAMXG00000042174	-	92	55.479
ENSAMXG00000036241	-	89	61.071	ENSAMXG00000037760	-	95	61.071
ENSAMXG00000036241	-	89	63.918	ENSAMXG00000041861	-	94	63.918
ENSAMXG00000036241	-	88	43.651	ENSAMXG00000041862	-	95	44.643
ENSAMXG00000036241	-	83	64.052	ENSAMXG00000041865	-	98	64.052
ENSAMXG00000036241	-	82	36.667	ENSAMXG00000041864	prdm5	88	37.295
ENSAMXG00000036241	-	92	62.682	ENSAMXG00000043423	-	83	58.808
ENSAMXG00000036241	-	89	59.159	ENSAMXG00000042633	-	99	59.159
ENSAMXG00000036241	-	82	31.095	ENSAMXG00000039622	zbtb41	50	34.899
ENSAMXG00000036241	-	84	60.219	ENSAMXG00000044107	-	87	60.219
ENSAMXG00000036241	-	92	63.529	ENSAMXG00000035875	-	99	63.529
ENSAMXG00000036241	-	82	66.667	ENSAMXG00000037885	-	97	66.667
ENSAMXG00000036241	-	82	60.204	ENSAMXG00000042746	-	84	60.204
ENSAMXG00000036241	-	95	61.224	ENSAMXG00000017609	-	84	66.535
ENSAMXG00000036241	-	86	35.294	ENSAMXG00000002273	patz1	51	31.048
ENSAMXG00000036241	-	94	52.174	ENSAMXG00000034096	-	94	55.789
ENSAMXG00000036241	-	90	56.173	ENSAMXG00000039408	-	98	56.173
ENSAMXG00000036241	-	86	42.727	ENSAMXG00000006669	GFI1	55	44.444
ENSAMXG00000036241	-	91	62.829	ENSAMXG00000034847	-	96	62.829
ENSAMXG00000036241	-	82	65.698	ENSAMXG00000041975	-	81	65.625
ENSAMXG00000036241	-	92	62.931	ENSAMXG00000042938	-	87	70.588
ENSAMXG00000036241	-	84	51.097	ENSAMXG00000030659	-	89	51.097
ENSAMXG00000036241	-	82	58.273	ENSAMXG00000036257	-	93	58.273
ENSAMXG00000036241	-	82	64.683	ENSAMXG00000037703	-	81	71.676
ENSAMXG00000036241	-	92	59.108	ENSAMXG00000037709	-	90	59.108
ENSAMXG00000036241	-	86	61.754	ENSAMXG00000039752	-	93	61.754
ENSAMXG00000036241	-	79	68.387	ENSAMXG00000029878	-	91	68.387
ENSAMXG00000036241	-	82	63.768	ENSAMXG00000041650	-	86	63.768
ENSAMXG00000036241	-	84	44.660	ENSAMXG00000037382	-	75	34.746
ENSAMXG00000036241	-	96	61.458	ENSAMXG00000010930	-	81	61.592
ENSAMXG00000036241	-	93	57.269	ENSAMXG00000043019	-	92	60.938
ENSAMXG00000036241	-	84	69.186	ENSAMXG00000004610	-	96	61.066

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000036241	-	93	47.205	ENSAOCG00000013672	-	94	51.163	Amphiprion_ocellaris
ENSAMXG00000036241	-	89	49.630	ENSACLG00000008821	-	95	49.724	Astatotilapia_calliptera
ENSAMXG00000036241	-	86	48.525	ENSTSYG00000006246	-	74	47.797	Carlito_syrichta
ENSAMXG00000036241	-	94	46.599	ENSCGRG00001024303	-	98	53.297	Cricetulus_griseus_chok1gshd
ENSAMXG00000036241	-	83	47.222	ENSCGRG00001012803	-	73	47.917	Cricetulus_griseus_chok1gshd
ENSAMXG00000036241	-	82	53.846	ENSCGRG00001019143	-	80	53.846	Cricetulus_griseus_chok1gshd
ENSAMXG00000036241	-	83	47.222	ENSCGRG00000009742	-	73	47.917	Cricetulus_griseus_crigri
ENSAMXG00000036241	-	86	48.276	ENSCGRG00000008531	-	90	48.276	Cricetulus_griseus_crigri
ENSAMXG00000036241	-	86	48.039	ENSEBUG00000017017	-	63	47.794	Eptatretus_burgeri
ENSAMXG00000036241	-	84	49.669	ENSEBUG00000001121	-	78	49.669	Eptatretus_burgeri
ENSAMXG00000036241	-	88	39.803	ENSEBUG00000015993	-	66	40.942	Eptatretus_burgeri
ENSAMXG00000036241	-	82	49.462	ENSEBUG00000003590	-	72	49.038	Eptatretus_burgeri
ENSAMXG00000036241	-	86	43.005	ENSEBUG00000003236	-	93	43.005	Eptatretus_burgeri
ENSAMXG00000036241	-	98	41.329	ENSEBUG00000015834	-	80	44.224	Eptatretus_burgeri
ENSAMXG00000036241	-	87	46.557	ENSEBUG00000007375	-	87	46.557	Eptatretus_burgeri
ENSAMXG00000036241	-	84	53.153	ENSIPUG00000013315	-	92	53.153	Ictalurus_punctatus
ENSAMXG00000036241	-	96	42.909	ENSMAUG00000005691	-	69	44.932	Mesocricetus_auratus
ENSAMXG00000036241	-	88	46.382	ENSMAUG00000016437	-	99	46.382	Mesocricetus_auratus
ENSAMXG00000036241	-	83	48.718	ENSMOCG00000000365	-	74	48.718	Microtus_ochrogaster
ENSAMXG00000036241	-	82	47.500	MGP_CAROLIEiJ_G0018660	-	61	47.500	Mus_caroli
ENSAMXG00000036241	-	89	53.214	MGP_CAROLIEiJ_G0018683	Zfp493	83	53.214	Mus_caroli
ENSAMXG00000036241	-	83	46.528	ENSMUSG00000074824	Rslcan18	60	46.528	Mus_musculus
ENSAMXG00000036241	-	82	55.298	ENSMUSG00000091474	2610021A01Rik	63	55.298	Mus_musculus
ENSAMXG00000036241	-	86	54.448	MGP_PahariEiJ_G0012839	-	54	54.448	Mus_pahari
ENSAMXG00000036241	-	83	48.000	MGP_SPRETEiJ_G0019543	-	63	48.000	Mus_spretus
ENSAMXG00000036241	-	82	38.494	ENSPMAG00000000404	-	99	39.844	Petromyzon_marinus
ENSAMXG00000036241	-	95	61.774	ENSPNAG00000003017	-	88	63.838	Pygocentrus_nattereri
ENSAMXG00000036241	-	82	67.188	ENSPNAG00000014492	-	93	67.188	Pygocentrus_nattereri
ENSAMXG00000036241	-	82	56.069	ENSSSCG00000040389	-	85	57.647	Sus_scrofa
ENSAMXG00000036241	-	94	33.628	ENSTRUG00000014476	-	94	36.486	Takifugu_rubripes