EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000036330 (Gene tree)
Gene ID: 103046565
Gene Symbol: RAB38
Alias: NY-MEL-1
Full Name: RAB38%2C member RAS oncogene family
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 7241 bases
Position: chr1:22771793-22779033
Accession: 103046565
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000035925	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000042156	-	1747	XM_007248601	ENSAMXP00000035925	216 (aa)	XP_007248663	W5K8V7

Gene Model

Click here to download ENSAMXG00000036330's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000036330's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000036330	RAB38	84	33.149	ENSAMXG00000042419	rab3c	81	33.149
ENSAMXG00000036330	RAB38	78	32.941	ENSAMXG00000003717	rab39bb	77	32.941
ENSAMXG00000036330	RAB38	83	35.484	ENSAMXG00000009640	rab14	83	35.484
ENSAMXG00000036330	RAB38	87	37.500	ENSAMXG00000033470	RAB15	87	37.500
ENSAMXG00000036330	RAB38	93	35.238	ENSAMXG00000032663	si:dkey-13a21.4	94	35.238
ENSAMXG00000036330	RAB38	89	35.294	ENSAMXG00000040126	-	72	35.294
ENSAMXG00000036330	RAB38	77	32.934	ENSAMXG00000012327	nras	89	32.934
ENSAMXG00000036330	RAB38	83	31.844	ENSAMXG00000010334	rras	85	31.844
ENSAMXG00000036330	RAB38	73	35.032	ENSAMXG00000013054	rab22a	77	35.032
ENSAMXG00000036330	RAB38	85	34.783	ENSAMXG00000026476	rab9b	81	34.783
ENSAMXG00000036330	RAB38	80	34.483	ENSAMXG00000003155	rab11a	77	34.483
ENSAMXG00000036330	RAB38	55	31.707	ENSAMXG00000033069	si:cabz01085950.1	56	31.707
ENSAMXG00000036330	RAB38	92	37.438	ENSAMXG00000039865	rab35b	97	37.438
ENSAMXG00000036330	RAB38	77	32.335	ENSAMXG00000017217	kras	85	32.934
ENSAMXG00000036330	RAB38	83	34.807	ENSAMXG00000014960	rab23	90	35.417
ENSAMXG00000036330	RAB38	79	30.857	ENSAMXG00000035919	rab5ab	76	30.857
ENSAMXG00000036330	RAB38	94	36.893	ENSAMXG00000031957	zgc:100918	98	36.893
ENSAMXG00000036330	RAB38	77	33.714	ENSAMXG00000010919	mras	78	33.714
ENSAMXG00000036330	RAB38	94	34.314	ENSAMXG00000002254	-	98	34.314
ENSAMXG00000036330	RAB38	83	37.705	ENSAMXG00000043951	rab15	83	37.705
ENSAMXG00000036330	RAB38	75	32.164	ENSAMXG00000029130	-	83	32.164
ENSAMXG00000036330	RAB38	82	35.912	ENSAMXG00000025889	RAB9A	87	35.912
ENSAMXG00000036330	RAB38	91	30.612	ENSAMXG00000033390	rap1aa	97	30.612
ENSAMXG00000036330	RAB38	76	36.364	ENSAMXG00000003547	rab1ba	72	36.364
ENSAMXG00000036330	RAB38	83	37.430	ENSAMXG00000032027	rab7a	86	37.430
ENSAMXG00000036330	RAB38	73	37.500	ENSAMXG00000032547	rab6a	73	37.500
ENSAMXG00000036330	RAB38	56	30.645	ENSAMXG00000042798	arfrp1	60	30.645
ENSAMXG00000036330	RAB38	82	34.807	ENSAMXG00000033216	rab41	89	34.807
ENSAMXG00000036330	RAB38	85	39.785	ENSAMXG00000036772	rab2a	82	39.785
ENSAMXG00000036330	RAB38	92	36.946	ENSAMXG00000040604	-	97	36.946
ENSAMXG00000036330	RAB38	78	32.544	ENSAMXG00000041657	rab39ba	77	32.544
ENSAMXG00000036330	RAB38	79	33.333	ENSAMXG00000032729	rab42a	78	33.333
ENSAMXG00000036330	RAB38	78	33.529	ENSAMXG00000029712	rab25b	77	33.529
ENSAMXG00000036330	RAB38	79	34.118	ENSAMXG00000042655	rab11bb	75	34.118
ENSAMXG00000036330	RAB38	92	50.500	ENSAMXG00000034227	rab32b	94	50.500
ENSAMXG00000036330	RAB38	95	35.111	ENSAMXG00000039737	RAB19	99	35.111
ENSAMXG00000036330	RAB38	82	35.754	ENSAMXG00000040286	rab33ba	71	35.165
ENSAMXG00000036330	RAB38	77	31.737	ENSAMXG00000033907	hrasb	85	31.737
ENSAMXG00000036330	RAB38	83	32.240	ENSAMXG00000037267	-	82	31.148
ENSAMXG00000036330	RAB38	73	32.704	ENSAMXG00000024632	rab11al	73	32.704
ENSAMXG00000036330	RAB38	79	35.882	ENSAMXG00000039486	zgc:171927	78	35.882
ENSAMXG00000036330	RAB38	77	35.294	ENSAMXG00000033764	si:ch73-116o1.2	78	35.294
ENSAMXG00000036330	RAB38	79	31.579	ENSAMXG00000043717	rab5c	75	31.579
ENSAMXG00000036330	RAB38	79	37.647	ENSAMXG00000032564	rab1ab	81	37.647
ENSAMXG00000036330	RAB38	82	35.393	ENSAMXG00000026059	RAB9A	88	35.393
ENSAMXG00000036330	RAB38	93	34.653	ENSAMXG00000034850	-	97	34.653
ENSAMXG00000036330	RAB38	73	35.625	ENSAMXG00000004630	rab6ba	80	35.625
ENSAMXG00000036330	RAB38	77	38.690	ENSAMXG00000042073	rab18b	79	38.690
ENSAMXG00000036330	RAB38	69	36.424	ENSAMXG00000037428	-	70	36.000
ENSAMXG00000036330	RAB38	73	31.056	ENSAMXG00000041488	dnajc27	57	31.056
ENSAMXG00000036330	RAB38	83	38.889	ENSAMXG00000004882	rab12	70	38.889
ENSAMXG00000036330	RAB38	91	35.176	ENSAMXG00000040460	zgc:101559	79	35.176
ENSAMXG00000036330	RAB38	78	42.857	ENSAMXG00000038243	si:dkey-16l2.16	84	47.170
ENSAMXG00000036330	RAB38	79	34.118	ENSAMXG00000037623	-	75	34.118
ENSAMXG00000036330	RAB38	81	39.655	ENSAMXG00000030712	rab13	83	39.655
ENSAMXG00000036330	RAB38	74	34.375	ENSAMXG00000040879	rab25a	72	34.375
ENSAMXG00000036330	RAB38	77	31.737	ENSAMXG00000035885	hrasa	85	31.737
ENSAMXG00000036330	RAB38	80	35.260	ENSAMXG00000009935	rab30	67	35.260

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000036330	RAB38	50	87.850	ENSFHEG00000018056	rab38b	88	87.850	Fundulus_heteroclitus
ENSAMXG00000036330	RAB38	98	70.423	ENSMMOG00000006440	rab38b	96	71.569	Mola_mola
ENSAMXG00000036330	RAB38	94	72.059	ENSMALG00000013514	rab38b	93	72.059	Monopterus_albus
ENSAMXG00000036330	RAB38	95	74.757	ENSPNAG00000017466	rab38b	98	74.757	Pygocentrus_nattereri