EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000036549 (Gene tree)
Gene ID: -
Gene Symbol: tdp2a
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2a
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 10092 bases
Position: chr11:4382367-4392458
Accession: ZDB-GENE-110218-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000050068	Exo_endo_phos	PF03372.23	1.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000053056	-	915	-	ENSAMXP00000050068	304 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000036549's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000036549's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000036549	tdp2a	87	48.507	ENSAMXG00000011775	tdp2b	70	48.507

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000036549	tdp2a	92	48.410	ENSG00000111802	TDP2	91	48.410	Homo_sapiens
ENSAMXG00000036549	tdp2a	81	56.000	ENSAPOG00000018379	-	87	56.000	Acanthochromis_polyacanthus
ENSAMXG00000036549	tdp2a	89	49.270	ENSAMEG00000010230	TDP2	97	49.270	Ailuropoda_melanoleuca
ENSAMXG00000036549	tdp2a	59	50.532	ENSAOCG00000010081	-	82	50.532	Amphiprion_ocellaris
ENSAMXG00000036549	tdp2a	85	51.515	ENSAPEG00000004208	-	93	51.515	Amphiprion_percula
ENSAMXG00000036549	tdp2a	93	46.181	ENSATEG00000010663	-	93	45.804	Anabas_testudineus
ENSAMXG00000036549	tdp2a	89	48.375	ENSACAG00000002332	TDP2	75	48.375	Anolis_carolinensis
ENSAMXG00000036549	tdp2a	92	49.110	ENSANAG00000020033	TDP2	77	49.110	Aotus_nancymaae
ENSAMXG00000036549	tdp2a	85	50.758	ENSACLG00000016148	tdp2b	94	50.758	Astatotilapia_calliptera
ENSAMXG00000036549	tdp2a	87	49.817	ENSACLG00000016174	tdp2b	91	49.817	Astatotilapia_calliptera
ENSAMXG00000036549	tdp2a	87	49.817	ENSACLG00000016132	tdp2b	91	49.817	Astatotilapia_calliptera
ENSAMXG00000036549	tdp2a	92	47.703	ENSBTAG00000000365	TDP2	76	47.703	Bos_taurus
ENSAMXG00000036549	tdp2a	79	32.389	WBGene00013405	tdpt-1	65	32.389	Caenorhabditis_elegans
ENSAMXG00000036549	tdp2a	92	48.754	ENSCJAG00000006074	TDP2	89	49.635	Callithrix_jacchus
ENSAMXG00000036549	tdp2a	92	47.687	ENSCJAG00000021963	-	77	47.687	Callithrix_jacchus
ENSAMXG00000036549	tdp2a	91	49.286	ENSCAFG00000010428	TDP2	93	50.000	Canis_familiaris
ENSAMXG00000036549	tdp2a	89	50.000	ENSCAFG00020009994	TDP2	93	50.000	Canis_lupus_dingo
ENSAMXG00000036549	tdp2a	92	47.703	ENSCHIG00000015294	-	94	47.703	Capra_hircus
ENSAMXG00000036549	tdp2a	84	49.225	ENSTSYG00000037199	TDP2	91	46.454	Carlito_syrichta
ENSAMXG00000036549	tdp2a	89	49.635	ENSCPOG00000006390	TDP2	76	49.635	Cavia_porcellus
ENSAMXG00000036549	tdp2a	92	48.754	ENSCCAG00000022734	TDP2	89	49.635	Cebus_capucinus
ENSAMXG00000036549	tdp2a	94	48.780	ENSCATG00000022076	TDP2	92	48.780	Cercocebus_atys
ENSAMXG00000036549	tdp2a	89	50.000	ENSCLAG00000002072	TDP2	76	50.000	Chinchilla_lanigera
ENSAMXG00000036549	tdp2a	92	48.582	ENSCSAG00000007769	TDP2	78	48.582	Chlorocebus_sabaeus
ENSAMXG00000036549	tdp2a	84	52.713	ENSCPBG00000006551	TDP2	65	52.713	Chrysemys_picta_bellii
ENSAMXG00000036549	tdp2a	92	49.470	ENSCANG00000040122	TDP2	91	49.470	Colobus_angolensis_palliatus
ENSAMXG00000036549	tdp2a	88	48.571	ENSCGRG00001000384	Tdp2	68	51.562	Cricetulus_griseus_chok1gshd
ENSAMXG00000036549	tdp2a	87	48.921	ENSCGRG00000010250	Tdp2	78	48.921	Cricetulus_griseus_crigri
ENSAMXG00000036549	tdp2a	80	53.036	ENSCVAG00000003114	tdp2b	68	53.036	Cyprinodon_variegatus
ENSAMXG00000036549	tdp2a	92	62.544	ENSDARG00000069941	tdp2a	62	62.544	Danio_rerio
ENSAMXG00000036549	tdp2a	87	50.000	ENSDARG00000035954	tdp2b	69	50.000	Danio_rerio
ENSAMXG00000036549	tdp2a	92	47.518	ENSDNOG00000044082	TDP2	76	47.518	Dasypus_novemcinctus
ENSAMXG00000036549	tdp2a	89	49.635	ENSETEG00000019096	TDP2	98	49.635	Echinops_telfairi
ENSAMXG00000036549	tdp2a	79	45.968	ENSEBUG00000006535	tdp2a	57	45.968	Eptatretus_burgeri
ENSAMXG00000036549	tdp2a	89	48.175	ENSEASG00005007656	TDP2	75	48.175	Equus_asinus_asinus
ENSAMXG00000036549	tdp2a	89	47.810	ENSECAG00000014264	TDP2	75	47.810	Equus_caballus
ENSAMXG00000036549	tdp2a	87	52.075	ENSEEUG00000010776	TDP2	74	52.075	Erinaceus_europaeus
ENSAMXG00000036549	tdp2a	87	50.923	ENSELUG00000016449	tdp2b	71	50.923	Esox_lucius
ENSAMXG00000036549	tdp2a	93	53.310	ENSELUG00000009321	tdp2a	89	53.310	Esox_lucius
ENSAMXG00000036549	tdp2a	89	49.270	ENSFCAG00000025612	TDP2	75	49.270	Felis_catus
ENSAMXG00000036549	tdp2a	89	50.182	ENSFALG00000004710	TDP2	76	50.182	Ficedula_albicollis
ENSAMXG00000036549	tdp2a	88	49.275	ENSFDAG00000006512	TDP2	94	49.275	Fukomys_damarensis
ENSAMXG00000036549	tdp2a	87	48.315	ENSFHEG00000013560	-	89	48.315	Fundulus_heteroclitus
ENSAMXG00000036549	tdp2a	86	52.471	ENSGALG00000013637	TDP2	71	52.471	Gallus_gallus
ENSAMXG00000036549	tdp2a	86	51.908	ENSGAGG00000002853	TDP2	67	51.908	Gopherus_agassizii
ENSAMXG00000036549	tdp2a	92	48.410	ENSGGOG00000014237	TDP2	91	48.410	Gorilla_gorilla
ENSAMXG00000036549	tdp2a	70	46.606	ENSHBUG00000005421	-	92	46.606	Haplochromis_burtoni
ENSAMXG00000036549	tdp2a	87	49.814	ENSHBUG00000002714	tdp2b	71	49.814	Haplochromis_burtoni
ENSAMXG00000036549	tdp2a	89	49.635	ENSHGLG00000008655	TDP2	76	49.635	Heterocephalus_glaber_female
ENSAMXG00000036549	tdp2a	89	49.635	ENSHGLG00100019087	TDP2	76	49.635	Heterocephalus_glaber_male
ENSAMXG00000036549	tdp2a	87	48.315	ENSIPUG00000013691	tdp2b	69	48.315	Ictalurus_punctatus
ENSAMXG00000036549	tdp2a	84	48.249	ENSJJAG00000021685	Tdp2	73	48.249	Jaculus_jaculus
ENSAMXG00000036549	tdp2a	82	52.964	ENSKMAG00000015485	-	80	52.964	Kryptolebias_marmoratus
ENSAMXG00000036549	tdp2a	86	52.060	ENSLACG00000008852	TDP2	72	52.060	Latimeria_chalumnae
ENSAMXG00000036549	tdp2a	87	53.558	ENSLOCG00000005817	tdp2b	92	53.558	Lepisosteus_oculatus
ENSAMXG00000036549	tdp2a	89	49.270	ENSLAFG00000002567	TDP2	73	51.163	Loxodonta_africana
ENSAMXG00000036549	tdp2a	92	49.117	ENSMFAG00000045296	TDP2	91	49.117	Macaca_fascicularis
ENSAMXG00000036549	tdp2a	92	48.582	ENSMMUG00000009803	TDP2	78	48.582	Macaca_mulatta
ENSAMXG00000036549	tdp2a	92	49.117	ENSMNEG00000038003	TDP2	91	49.117	Macaca_nemestrina
ENSAMXG00000036549	tdp2a	92	49.117	ENSMLEG00000028883	TDP2	91	49.117	Mandrillus_leucophaeus
ENSAMXG00000036549	tdp2a	88	50.530	ENSMAMG00000013654	tdp2b	78	50.530	Mastacembelus_armatus
ENSAMXG00000036549	tdp2a	87	50.186	ENSMZEG00005003950	tdp2b	71	50.186	Maylandia_zebra
ENSAMXG00000036549	tdp2a	88	48.905	ENSMZEG00005004077	tdp2b	93	48.905	Maylandia_zebra
ENSAMXG00000036549	tdp2a	84	49.237	ENSMZEG00005004103	tdp2b	88	49.237	Maylandia_zebra
ENSAMXG00000036549	tdp2a	87	49.259	ENSMZEG00005004153	tdp2b	95	49.259	Maylandia_zebra
ENSAMXG00000036549	tdp2a	76	46.862	ENSMZEG00005003980	-	77	46.862	Maylandia_zebra
ENSAMXG00000036549	tdp2a	78	52.917	ENSMZEG00005004055	tdp2b	80	52.917	Maylandia_zebra
ENSAMXG00000036549	tdp2a	86	50.000	ENSMZEG00005004126	tdp2b	89	51.136	Maylandia_zebra
ENSAMXG00000036549	tdp2a	89	52.000	ENSMGAG00000008014	TDP2	74	52.000	Meleagris_gallopavo
ENSAMXG00000036549	tdp2a	83	50.391	ENSMAUG00000014451	Tdp2	68	50.391	Mesocricetus_auratus
ENSAMXG00000036549	tdp2a	94	47.751	ENSMICG00000000039	TDP2	96	47.751	Microcebus_murinus
ENSAMXG00000036549	tdp2a	87	48.872	ENSMOCG00000002823	Tdp2	71	48.872	Microtus_ochrogaster
ENSAMXG00000036549	tdp2a	73	49.778	ENSMODG00000011653	TDP2	66	50.459	Monodelphis_domestica
ENSAMXG00000036549	tdp2a	79	53.086	ENSMALG00000005368	-	82	53.086	Monopterus_albus
ENSAMXG00000036549	tdp2a	84	51.923	MGP_CAROLIEiJ_G0018354	Tdp2	69	51.923	Mus_caroli
ENSAMXG00000036549	tdp2a	83	51.953	ENSMUSG00000035958	Tdp2	68	51.953	Mus_musculus
ENSAMXG00000036549	tdp2a	83	51.383	MGP_PahariEiJ_G0019417	Tdp2	68	51.383	Mus_pahari
ENSAMXG00000036549	tdp2a	83	51.953	MGP_SPRETEiJ_G0019220	Tdp2	67	51.953	Mus_spretus
ENSAMXG00000036549	tdp2a	89	49.635	ENSMPUG00000004516	TDP2	76	49.635	Mustela_putorius_furo
ENSAMXG00000036549	tdp2a	84	50.965	ENSMLUG00000013506	TDP2	71	50.965	Myotis_lucifugus
ENSAMXG00000036549	tdp2a	82	47.619	ENSNGAG00000001375	Tdp2	67	47.619	Nannospalax_galili
ENSAMXG00000036549	tdp2a	92	49.117	ENSNLEG00000002447	TDP2	88	49.117	Nomascus_leucogenys
ENSAMXG00000036549	tdp2a	89	48.540	ENSOPRG00000016299	TDP2	78	48.540	Ochotona_princeps
ENSAMXG00000036549	tdp2a	93	48.070	ENSODEG00000014018	TDP2	96	48.070	Octodon_degus
ENSAMXG00000036549	tdp2a	89	48.540	ENSOCUG00000013773	TDP2	76	48.540	Oryctolagus_cuniculus
ENSAMXG00000036549	tdp2a	84	49.815	ENSORLG00000001661	-	98	49.815	Oryzias_latipes
ENSAMXG00000036549	tdp2a	84	49.815	ENSORLG00020004634	-	98	49.815	Oryzias_latipes_hni
ENSAMXG00000036549	tdp2a	87	44.944	ENSORLG00015008190	-	97	44.944	Oryzias_latipes_hsok
ENSAMXG00000036549	tdp2a	82	52.778	ENSOMEG00000015899	-	90	53.279	Oryzias_melastigma
ENSAMXG00000036549	tdp2a	89	49.091	ENSOGAG00000025303	TDP2	74	49.091	Otolemur_garnettii
ENSAMXG00000036549	tdp2a	92	48.410	ENSPPAG00000029023	TDP2	91	48.410	Pan_paniscus
ENSAMXG00000036549	tdp2a	89	48.905	ENSPPRG00000015398	TDP2	75	48.905	Panthera_pardus
ENSAMXG00000036549	tdp2a	89	49.270	ENSPTIG00000018574	TDP2	93	49.270	Panthera_tigris_altaica
ENSAMXG00000036549	tdp2a	92	48.410	ENSPTRG00000017778	TDP2	91	48.410	Pan_troglodytes
ENSAMXG00000036549	tdp2a	86	50.763	ENSPANG00000017590	TDP2	92	48.780	Papio_anubis
ENSAMXG00000036549	tdp2a	81	55.422	ENSPKIG00000006483	tdp2b	67	55.422	Paramormyrops_kingsleyae
ENSAMXG00000036549	tdp2a	89	50.365	ENSPSIG00000004948	TDP2	94	50.365	Pelodiscus_sinensis
ENSAMXG00000036549	tdp2a	84	51.154	ENSPEMG00000001788	Tdp2	69	51.154	Peromyscus_maniculatus_bairdii
ENSAMXG00000036549	tdp2a	81	44.487	ENSPMAG00000001570	tdp2b	95	44.487	Petromyzon_marinus
ENSAMXG00000036549	tdp2a	84	48.837	ENSPCIG00000007316	TDP2	67	48.837	Phascolarctos_cinereus
ENSAMXG00000036549	tdp2a	87	49.071	ENSPFOG00000017990	-	94	49.071	Poecilia_formosa
ENSAMXG00000036549	tdp2a	85	49.618	ENSPLAG00000019439	-	80	49.618	Poecilia_latipinna
ENSAMXG00000036549	tdp2a	79	51.429	ENSPMEG00000010824	-	82	51.429	Poecilia_mexicana
ENSAMXG00000036549	tdp2a	92	47.872	ENSPPYG00000016282	TDP2	71	47.872	Pongo_abelii
ENSAMXG00000036549	tdp2a	92	47.872	ENSPCOG00000021415	TDP2	95	48.540	Propithecus_coquereli
ENSAMXG00000036549	tdp2a	60	45.355	ENSPNYG00000001944	-	66	50.000	Pundamilia_nyererei
ENSAMXG00000036549	tdp2a	87	50.186	ENSPNYG00000011532	tdp2b	71	50.186	Pundamilia_nyererei
ENSAMXG00000036549	tdp2a	88	46.622	ENSPNYG00000011504	tdp2b	96	46.622	Pundamilia_nyererei
ENSAMXG00000036549	tdp2a	90	78.339	ENSPNAG00000022162	tdp2a	68	78.339	Pygocentrus_nattereri
ENSAMXG00000036549	tdp2a	83	50.391	ENSRNOG00000018246	Tdp2	68	50.391	Rattus_norvegicus
ENSAMXG00000036549	tdp2a	92	49.470	ENSRBIG00000037119	TDP2	91	49.470	Rhinopithecus_bieti
ENSAMXG00000036549	tdp2a	92	49.470	ENSRROG00000005025	TDP2	91	49.470	Rhinopithecus_roxellana
ENSAMXG00000036549	tdp2a	94	48.780	ENSSBOG00000028734	TDP2	92	48.780	Saimiri_boliviensis_boliviensis
ENSAMXG00000036549	tdp2a	84	50.000	ENSSHAG00000002506	TDP2	68	50.000	Sarcophilus_harrisii
ENSAMXG00000036549	tdp2a	82	67.600	ENSSFOG00015011322	-	70	66.800	Scleropages_formosus
ENSAMXG00000036549	tdp2a	87	48.496	ENSSARG00000013547	TDP2	95	48.496	Sorex_araneus
ENSAMXG00000036549	tdp2a	86	51.527	ENSSPUG00000008288	TDP2	71	51.527	Sphenodon_punctatus
ENSAMXG00000036549	tdp2a	89	49.635	ENSSSCG00000001092	TDP2	75	49.635	Sus_scrofa
ENSAMXG00000036549	tdp2a	84	51.550	ENSTGUG00000009035	TDP2	98	51.550	Taeniopygia_guttata
ENSAMXG00000036549	tdp2a	90	48.936	ENSTRUG00000014347	tdp2b	78	48.936	Takifugu_rubripes
ENSAMXG00000036549	tdp2a	91	50.357	ENSTRUG00000012218	-	96	50.357	Takifugu_rubripes
ENSAMXG00000036549	tdp2a	81	53.755	ENSTNIG00000010260	TDP2	95	53.755	Tetraodon_nigroviridis
ENSAMXG00000036549	tdp2a	85	51.515	ENSTNIG00000017792	tdp2b	72	51.515	Tetraodon_nigroviridis
ENSAMXG00000036549	tdp2a	84	51.163	ENSTTRG00000016376	TDP2	75	50.000	Tursiops_truncatus
ENSAMXG00000036549	tdp2a	89	48.905	ENSUAMG00000025939	TDP2	78	48.905	Ursus_americanus
ENSAMXG00000036549	tdp2a	89	48.905	ENSUMAG00000020111	TDP2	91	48.905	Ursus_maritimus
ENSAMXG00000036549	tdp2a	86	50.190	ENSXETG00000014826	tdp2	70	50.190	Xenopus_tropicalis
ENSAMXG00000036549	tdp2a	79	53.252	ENSXCOG00000010778	-	68	53.252	Xiphophorus_couchianus
ENSAMXG00000036549	tdp2a	79	53.252	ENSXMAG00000022252	-	71	53.252	Xiphophorus_maculatus