EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000036611 (Gene tree)
Gene ID: -
Gene Symbol: rbm4.1
Alias: rbm4|wu:fc31f07|wu:fc57h11
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 1834 bases
Position: chr16:39001893-39003726
Accession: 103040853
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000028261	zf-CCHC	PF00098.23	1.1e-07	1	1
ENSAMXP00000028261	RRM_5	PF13893.6	7.3e-07	1	1
ENSAMXP00000028261	RRM_1	PF00076.22	9.9e-35	1	2
ENSAMXP00000028261	RRM_1	PF00076.22	9.9e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000044542	-	1116	XM_007250183	ENSAMXP00000028261	371 (aa)	XP_007250245	-

Gene Model

Click here to download ENSAMXG00000036611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000036611's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000036611	rbm4.1	52	72.535	ENSAMXG00000032121	rbm4.2	89	72.535

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000036611	rbm4.1	100	63.593	ENSAPOG00000012353	rbm4.1	100	62.796	Acanthochromis_polyacanthus
ENSAMXG00000036611	rbm4.1	100	63.507	ENSACIG00000016482	rbm4.1	100	62.233	Amphilophus_citrinellus
ENSAMXG00000036611	rbm4.1	100	63.357	ENSAOCG00000010915	rbm4.1	100	62.559	Amphiprion_ocellaris
ENSAMXG00000036611	rbm4.1	100	63.357	ENSAPEG00000009494	rbm4.1	100	62.559	Amphiprion_percula
ENSAMXG00000036611	rbm4.1	99	52.062	ENSACLG00000007740	-	99	52.551	Astatotilapia_calliptera
ENSAMXG00000036611	rbm4.1	100	62.559	ENSACLG00000007722	rbm4.1	100	59.242	Astatotilapia_calliptera
ENSAMXG00000036611	rbm4.1	100	58.432	ENSCSEG00000014365	rbm4.1	100	57.720	Cynoglossus_semilaevis
ENSAMXG00000036611	rbm4.1	99	53.181	ENSCSEG00000014359	-	99	51.111	Cynoglossus_semilaevis
ENSAMXG00000036611	rbm4.1	100	61.758	ENSCVAG00000019349	rbm4.1	100	61.045	Cyprinodon_variegatus
ENSAMXG00000036611	rbm4.1	100	69.834	ENSDARG00000036386	rbm4.1	79	92.754	Danio_rerio
ENSAMXG00000036611	rbm4.1	100	60.567	ENSDARG00000055080	rbm4.2	100	61.240	Danio_rerio
ENSAMXG00000036611	rbm4.1	96	43.324	ENSEBUG00000007174	-	97	56.322	Eptatretus_burgeri
ENSAMXG00000036611	rbm4.1	100	64.371	ENSELUG00000013205	rbm4.1	100	65.083	Esox_lucius
ENSAMXG00000036611	rbm4.1	100	62.796	ENSFHEG00000022926	rbm4.1	100	61.137	Fundulus_heteroclitus
ENSAMXG00000036611	rbm4.1	91	54.749	ENSGMOG00000007455	-	99	52.709	Gadus_morhua
ENSAMXG00000036611	rbm4.1	100	59.059	ENSGMOG00000007464	rbm4.1	100	59.811	Gadus_morhua
ENSAMXG00000036611	rbm4.1	100	61.702	ENSGAFG00000019302	rbm4.1	100	60.993	Gambusia_affinis
ENSAMXG00000036611	rbm4.1	99	66.938	ENSGACG00000000822	rbm4.1	99	66.667	Gasterosteus_aculeatus
ENSAMXG00000036611	rbm4.1	93	52.210	ENSGACG00000000821	-	94	54.645	Gasterosteus_aculeatus
ENSAMXG00000036611	rbm4.1	100	62.559	ENSHBUG00000011610	rbm4.1	100	59.242	Haplochromis_burtoni
ENSAMXG00000036611	rbm4.1	91	62.304	ENSHCOG00000011403	rbm4.1	95	61.155	Hippocampus_comes
ENSAMXG00000036611	rbm4.1	100	56.633	ENSIPUG00000022937	rbm4.2	100	56.599	Ictalurus_punctatus
ENSAMXG00000036611	rbm4.1	100	70.794	ENSIPUG00000022931	rbm4.1	100	72.196	Ictalurus_punctatus
ENSAMXG00000036611	rbm4.1	99	46.667	ENSKMAG00000006528	-	99	46.482	Kryptolebias_marmoratus
ENSAMXG00000036611	rbm4.1	100	60.382	ENSKMAG00000006556	rbm4.1	100	59.189	Kryptolebias_marmoratus
ENSAMXG00000036611	rbm4.1	99	51.938	ENSLBEG00000019756	-	90	62.179	Labrus_bergylta
ENSAMXG00000036611	rbm4.1	100	61.702	ENSLBEG00000019782	rbm4.1	100	60.520	Labrus_bergylta
ENSAMXG00000036611	rbm4.1	100	63.443	ENSMAMG00000001765	rbm4.1	100	62.884	Mastacembelus_armatus
ENSAMXG00000036611	rbm4.1	95	55.172	ENSMAMG00000001760	-	96	55.172	Mastacembelus_armatus
ENSAMXG00000036611	rbm4.1	100	62.559	ENSMZEG00005009205	rbm4.1	100	59.242	Maylandia_zebra
ENSAMXG00000036611	rbm4.1	100	62.207	ENSMMOG00000020479	rbm4.1	100	62.118	Mola_mola
ENSAMXG00000036611	rbm4.1	99	52.911	ENSMALG00000020557	-	99	53.250	Monopterus_albus
ENSAMXG00000036611	rbm4.1	100	62.559	ENSNBRG00000017755	rbm4.1	100	59.242	Neolamprologus_brichardi
ENSAMXG00000036611	rbm4.1	100	62.559	ENSONIG00000015730	rbm4.1	100	59.242	Oreochromis_niloticus
ENSAMXG00000036611	rbm4.1	100	60.664	ENSORLG00000012496	rbm4.1	100	61.098	Oryzias_latipes
ENSAMXG00000036611	rbm4.1	100	60.664	ENSORLG00020012454	rbm4.1	100	61.098	Oryzias_latipes_hni
ENSAMXG00000036611	rbm4.1	100	60.664	ENSORLG00015013678	rbm4.1	100	61.098	Oryzias_latipes_hsok
ENSAMXG00000036611	rbm4.1	100	61.137	ENSOMEG00000001001	rbm4.1	100	62.143	Oryzias_melastigma
ENSAMXG00000036611	rbm4.1	100	64.319	ENSPKIG00000020805	rbm4.1	87	86.232	Paramormyrops_kingsleyae
ENSAMXG00000036611	rbm4.1	100	61.702	ENSPFOG00000012675	rbm4.1	100	60.993	Poecilia_formosa
ENSAMXG00000036611	rbm4.1	99	51.042	ENSPFOG00000012685	-	99	50.909	Poecilia_formosa
ENSAMXG00000036611	rbm4.1	100	61.702	ENSPLAG00000018572	rbm4.1	100	60.993	Poecilia_latipinna
ENSAMXG00000036611	rbm4.1	100	61.702	ENSPMEG00000006290	rbm4.1	100	60.993	Poecilia_mexicana
ENSAMXG00000036611	rbm4.1	100	61.702	ENSPREG00000003724	rbm4.1	100	60.993	Poecilia_reticulata
ENSAMXG00000036611	rbm4.1	99	48.825	ENSPREG00000003764	-	99	48.042	Poecilia_reticulata
ENSAMXG00000036611	rbm4.1	100	62.559	ENSPNYG00000004662	rbm4.1	100	59.242	Pundamilia_nyererei
ENSAMXG00000036611	rbm4.1	100	79.567	ENSPNAG00000002539	rbm4.1	100	81.010	Pygocentrus_nattereri
ENSAMXG00000036611	rbm4.1	100	57.772	ENSPNAG00000013057	rbm4.2	100	57.216	Pygocentrus_nattereri
ENSAMXG00000036611	rbm4.1	100	64.554	ENSSFOG00015021996	sf1	100	64.941	Scleropages_formosus
ENSAMXG00000036611	rbm4.1	100	61.939	ENSSMAG00000007571	rbm4.1	100	59.574	Scophthalmus_maximus
ENSAMXG00000036611	rbm4.1	100	64.858	ENSSDUG00000003925	rbm4.1	100	62.972	Seriola_dumerili
ENSAMXG00000036611	rbm4.1	94	56.334	ENSSDUG00000003936	-	99	56.331	Seriola_dumerili
ENSAMXG00000036611	rbm4.1	100	64.858	ENSSLDG00000013147	rbm4.1	100	62.972	Seriola_lalandi_dorsalis
ENSAMXG00000036611	rbm4.1	94	52.520	ENSSLDG00000013157	-	99	54.780	Seriola_lalandi_dorsalis
ENSAMXG00000036611	rbm4.1	99	51.429	ENSSPAG00000019046	-	99	48.379	Stegastes_partitus
ENSAMXG00000036611	rbm4.1	100	62.619	ENSTRUG00000013334	rbm4.1	100	61.905	Takifugu_rubripes
ENSAMXG00000036611	rbm4.1	99	49.870	ENSTRUG00000013328	-	99	48.825	Takifugu_rubripes
ENSAMXG00000036611	rbm4.1	97	51.053	ENSTNIG00000000316	-	98	50.529	Tetraodon_nigroviridis
ENSAMXG00000036611	rbm4.1	100	64.690	ENSTNIG00000004821	rbm4.1	100	64.690	Tetraodon_nigroviridis
ENSAMXG00000036611	rbm4.1	86	53.271	ENSXETG00000026649	rbm4b	99	50.267	Xenopus_tropicalis
ENSAMXG00000036611	rbm4.1	100	61.939	ENSXCOG00000003731	rbm4.1	100	61.229	Xiphophorus_couchianus
ENSAMXG00000036611	rbm4.1	99	51.436	ENSXMAG00000008059	-	99	51.302	Xiphophorus_maculatus
ENSAMXG00000036611	rbm4.1	100	61.939	ENSXMAG00000008069	rbm4.1	100	61.229	Xiphophorus_maculatus