EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000036633 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 5541 bases
Position: chrAPWO02000072.1:303794-309334
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000049248	zf-C2H2	PF00096.26	2.4e-60	1	10
ENSAMXP00000049248	zf-C2H2	PF00096.26	2.4e-60	2	10
ENSAMXP00000049248	zf-C2H2	PF00096.26	2.4e-60	3	10
ENSAMXP00000049248	zf-C2H2	PF00096.26	2.4e-60	4	10
ENSAMXP00000049248	zf-C2H2	PF00096.26	2.4e-60	5	10
ENSAMXP00000049248	zf-C2H2	PF00096.26	2.4e-60	6	10
ENSAMXP00000049248	zf-C2H2	PF00096.26	2.4e-60	7	10
ENSAMXP00000049248	zf-C2H2	PF00096.26	2.4e-60	8	10
ENSAMXP00000049248	zf-C2H2	PF00096.26	2.4e-60	9	10
ENSAMXP00000049248	zf-C2H2	PF00096.26	2.4e-60	10	10
ENSAMXP00000049248	zf-met	PF12874.7	1.1e-13	1	3
ENSAMXP00000049248	zf-met	PF12874.7	1.1e-13	2	3
ENSAMXP00000049248	zf-met	PF12874.7	1.1e-13	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000050937	-	1482	-	ENSAMXP00000049248	493 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000036633's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000036633's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000036633	-	74	37.895	ENSAMXG00000035525	znf646	70	44.444
ENSAMXG00000036633	-	66	63.214	ENSAMXG00000035949	-	74	60.751
ENSAMXG00000036633	-	61	67.010	ENSAMXG00000041404	-	96	67.014
ENSAMXG00000036633	-	61	62.153	ENSAMXG00000009776	-	98	65.060
ENSAMXG00000036633	-	61	66.997	ENSAMXG00000039162	-	93	67.114
ENSAMXG00000036633	-	77	64.286	ENSAMXG00000038453	-	82	64.286
ENSAMXG00000036633	-	61	65.017	ENSAMXG00000000353	-	93	65.217
ENSAMXG00000036633	-	61	34.899	ENSAMXG00000039849	snai1b	78	34.043
ENSAMXG00000036633	-	62	66.518	ENSAMXG00000031646	-	93	63.095
ENSAMXG00000036633	-	63	58.247	ENSAMXG00000041650	-	86	52.703
ENSAMXG00000036633	-	62	60.947	ENSAMXG00000037326	-	90	56.000
ENSAMXG00000036633	-	61	53.165	ENSAMXG00000038122	-	98	53.165
ENSAMXG00000036633	-	63	40.385	ENSAMXG00000033299	-	69	40.065
ENSAMXG00000036633	-	69	59.545	ENSAMXG00000040806	-	89	58.667
ENSAMXG00000036633	-	66	46.763	ENSAMXG00000034934	-	80	46.324
ENSAMXG00000036633	-	62	59.406	ENSAMXG00000036915	-	94	59.333
ENSAMXG00000036633	-	61	65.957	ENSAMXG00000036762	-	92	65.591
ENSAMXG00000036633	-	61	66.667	ENSAMXG00000008613	-	96	67.466
ENSAMXG00000036633	-	63	62.100	ENSAMXG00000004610	-	97	60.078
ENSAMXG00000036633	-	67	58.382	ENSAMXG00000031307	-	60	54.082
ENSAMXG00000036633	-	66	53.633	ENSAMXG00000012873	-	95	57.613
ENSAMXG00000036633	-	62	66.434	ENSAMXG00000025965	-	94	66.548
ENSAMXG00000036633	-	62	43.262	ENSAMXG00000006669	GFI1	54	43.796
ENSAMXG00000036633	-	62	64.052	ENSAMXG00000042774	-	94	63.636
ENSAMXG00000036633	-	65	36.842	ENSAMXG00000016921	znf341	53	31.849
ENSAMXG00000036633	-	61	59.517	ENSAMXG00000031489	-	91	63.140
ENSAMXG00000036633	-	65	39.085	ENSAMXG00000025761	-	86	39.085
ENSAMXG00000036633	-	62	59.259	ENSAMXG00000030963	-	64	58.667
ENSAMXG00000036633	-	64	55.873	ENSAMXG00000038325	-	92	58.716
ENSAMXG00000036633	-	67	55.182	ENSAMXG00000001626	-	92	61.794
ENSAMXG00000036633	-	61	66.667	ENSAMXG00000035920	-	92	67.391
ENSAMXG00000036633	-	62	62.305	ENSAMXG00000033500	-	94	65.972
ENSAMXG00000036633	-	62	59.375	ENSAMXG00000013492	-	97	49.593
ENSAMXG00000036633	-	66	61.786	ENSAMXG00000041609	-	99	61.818
ENSAMXG00000036633	-	68	56.800	ENSAMXG00000038905	-	87	56.800
ENSAMXG00000036633	-	64	62.829	ENSAMXG00000010805	-	86	63.000
ENSAMXG00000036633	-	66	60.000	ENSAMXG00000038284	-	91	60.000
ENSAMXG00000036633	-	62	55.657	ENSAMXG00000038280	-	86	58.667
ENSAMXG00000036633	-	66	58.416	ENSAMXG00000017959	-	94	58.389
ENSAMXG00000036633	-	66	56.997	ENSAMXG00000013274	-	97	56.944
ENSAMXG00000036633	-	62	46.324	ENSAMXG00000042191	zbtb47a	70	40.826
ENSAMXG00000036633	-	62	61.616	ENSAMXG00000039182	-	59	60.854
ENSAMXG00000036633	-	63	56.471	ENSAMXG00000034344	-	74	57.600
ENSAMXG00000036633	-	74	60.638	ENSAMXG00000036849	-	75	60.791
ENSAMXG00000036633	-	63	62.774	ENSAMXG00000042938	-	85	62.774
ENSAMXG00000036633	-	59	39.241	ENSAMXG00000038235	snai2	61	39.806
ENSAMXG00000036633	-	75	60.396	ENSAMXG00000010078	-	83	61.074
ENSAMXG00000036633	-	62	62.162	ENSAMXG00000029109	-	87	57.192
ENSAMXG00000036633	-	61	64.356	ENSAMXG00000041128	-	87	64.430
ENSAMXG00000036633	-	62	64.855	ENSAMXG00000009558	-	93	63.754
ENSAMXG00000036633	-	61	41.026	ENSAMXG00000042624	SCRT1	54	41.026
ENSAMXG00000036633	-	63	64.013	ENSAMXG00000025452	-	99	65.333
ENSAMXG00000036633	-	61	65.625	ENSAMXG00000025455	-	98	65.724
ENSAMXG00000036633	-	64	53.875	ENSAMXG00000012604	-	98	53.846
ENSAMXG00000036633	-	62	66.894	ENSAMXG00000024978	-	97	66.894
ENSAMXG00000036633	-	61	53.737	ENSAMXG00000043541	-	82	53.947
ENSAMXG00000036633	-	62	51.852	ENSAMXG00000035286	si:ch1073-224n8.1	83	41.729
ENSAMXG00000036633	-	67	61.056	ENSAMXG00000033201	-	98	60.667
ENSAMXG00000036633	-	62	62.057	ENSAMXG00000034402	-	91	62.094
ENSAMXG00000036633	-	70	40.179	ENSAMXG00000029059	-	63	37.850
ENSAMXG00000036633	-	62	60.909	ENSAMXG00000042784	-	94	60.909
ENSAMXG00000036633	-	69	55.202	ENSAMXG00000040677	-	86	61.024
ENSAMXG00000036633	-	62	67.987	ENSAMXG00000039744	-	99	68.121
ENSAMXG00000036633	-	66	50.962	ENSAMXG00000007973	-	91	48.768
ENSAMXG00000036633	-	61	47.590	ENSAMXG00000044096	-	80	49.333
ENSAMXG00000036633	-	63	60.284	ENSAMXG00000043019	-	92	59.585
ENSAMXG00000036633	-	66	60.726	ENSAMXG00000035437	-	97	61.074
ENSAMXG00000036633	-	71	66.129	ENSAMXG00000042167	-	91	66.129
ENSAMXG00000036633	-	63	62.500	ENSAMXG00000032619	-	96	62.542
ENSAMXG00000036633	-	66	60.262	ENSAMXG00000041861	-	94	57.769
ENSAMXG00000036633	-	61	61.324	ENSAMXG00000039016	-	80	61.324
ENSAMXG00000036633	-	65	57.338	ENSAMXG00000039770	-	81	58.696
ENSAMXG00000036633	-	63	56.721	ENSAMXG00000042746	-	85	56.667
ENSAMXG00000036633	-	61	65.677	ENSAMXG00000032457	-	91	65.993
ENSAMXG00000036633	-	62	65.347	ENSAMXG00000029178	-	96	65.436
ENSAMXG00000036633	-	69	66.929	ENSAMXG00000017609	-	73	67.213
ENSAMXG00000036633	-	65	58.716	ENSAMXG00000033013	-	81	55.645
ENSAMXG00000036633	-	61	65.581	ENSAMXG00000035145	-	62	61.728
ENSAMXG00000036633	-	63	41.143	ENSAMXG00000007441	-	57	43.011
ENSAMXG00000036633	-	62	67.327	ENSAMXG00000039879	-	97	67.450
ENSAMXG00000036633	-	59	39.744	ENSAMXG00000038085	scrt1a	51	39.744
ENSAMXG00000036633	-	60	54.044	ENSAMXG00000030659	-	80	54.044
ENSAMXG00000036633	-	61	66.337	ENSAMXG00000043251	-	97	66.443
ENSAMXG00000036633	-	62	66.447	ENSAMXG00000007092	-	96	66.555
ENSAMXG00000036633	-	62	67.021	ENSAMXG00000041975	-	80	66.667
ENSAMXG00000036633	-	57	63.214	ENSAMXG00000003002	-	92	62.609
ENSAMXG00000036633	-	90	61.056	ENSAMXG00000010930	-	81	61.074
ENSAMXG00000036633	-	62	55.230	ENSAMXG00000029783	-	87	53.082
ENSAMXG00000036633	-	62	48.936	ENSAMXG00000029518	-	52	53.659
ENSAMXG00000036633	-	63	57.621	ENSAMXG00000039408	-	91	57.621
ENSAMXG00000036633	-	70	64.605	ENSAMXG00000030911	-	64	65.188
ENSAMXG00000036633	-	67	58.904	ENSAMXG00000029960	-	93	58.904
ENSAMXG00000036633	-	62	40.086	ENSAMXG00000044034	-	65	35.547
ENSAMXG00000036633	-	62	58.333	ENSAMXG00000037709	-	82	56.195
ENSAMXG00000036633	-	61	66.007	ENSAMXG00000018161	-	93	66.107
ENSAMXG00000036633	-	68	59.763	ENSAMXG00000043423	-	81	63.787
ENSAMXG00000036633	-	62	39.649	ENSAMXG00000041864	prdm5	87	40.000
ENSAMXG00000036633	-	63	58.033	ENSAMXG00000038536	-	85	58.000
ENSAMXG00000036633	-	62	65.461	ENSAMXG00000029828	-	97	65.552
ENSAMXG00000036633	-	65	59.259	ENSAMXG00000019489	-	91	57.463
ENSAMXG00000036633	-	62	66.107	ENSAMXG00000035690	-	69	66.327
ENSAMXG00000036633	-	61	43.820	ENSAMXG00000034873	-	80	38.931
ENSAMXG00000036633	-	64	54.934	ENSAMXG00000042174	-	92	55.263
ENSAMXG00000036633	-	61	50.877	ENSAMXG00000012589	-	85	47.917
ENSAMXG00000036633	-	66	58.962	ENSAMXG00000032841	-	78	59.155
ENSAMXG00000036633	-	62	45.000	ENSAMXG00000032845	-	56	43.860
ENSAMXG00000036633	-	69	49.425	ENSAMXG00000037382	-	92	43.284
ENSAMXG00000036633	-	62	60.066	ENSAMXG00000037143	-	94	60.403
ENSAMXG00000036633	-	66	62.252	ENSAMXG00000031794	-	93	66.107
ENSAMXG00000036633	-	62	49.223	ENSAMXG00000014745	-	82	49.474
ENSAMXG00000036633	-	62	60.714	ENSAMXG00000038324	-	78	61.986
ENSAMXG00000036633	-	62	64.026	ENSAMXG00000041865	-	97	64.094
ENSAMXG00000036633	-	62	43.363	ENSAMXG00000041862	-	95	38.722
ENSAMXG00000036633	-	68	59.389	ENSAMXG00000039700	-	92	57.209
ENSAMXG00000036633	-	62	64.935	ENSAMXG00000029878	-	92	64.901
ENSAMXG00000036633	-	61	67.235	ENSAMXG00000037885	-	97	67.466
ENSAMXG00000036633	-	62	59.344	ENSAMXG00000036241	-	81	59.468
ENSAMXG00000036633	-	62	66.337	ENSAMXG00000031501	-	89	66.443
ENSAMXG00000036633	-	73	59.524	ENSAMXG00000034096	-	89	60.000
ENSAMXG00000036633	-	63	42.222	ENSAMXG00000033001	-	54	44.872
ENSAMXG00000036633	-	62	57.516	ENSAMXG00000043978	-	82	57.475
ENSAMXG00000036633	-	61	65.979	ENSAMXG00000031900	-	95	65.625
ENSAMXG00000036633	-	62	65.017	ENSAMXG00000035809	-	99	65.101
ENSAMXG00000036633	-	62	61.364	ENSAMXG00000030742	-	98	61.386
ENSAMXG00000036633	-	61	67.660	ENSAMXG00000037703	-	81	67.143
ENSAMXG00000036633	-	61	49.804	ENSAMXG00000035127	-	88	48.744
ENSAMXG00000036633	-	62	62.338	ENSAMXG00000032212	-	86	57.047
ENSAMXG00000036633	-	69	61.236	ENSAMXG00000041721	-	72	57.727
ENSAMXG00000036633	-	62	63.604	ENSAMXG00000041725	-	88	64.164
ENSAMXG00000036633	-	66	62.097	ENSAMXG00000039432	-	92	64.646
ENSAMXG00000036633	-	63	55.435	ENSAMXG00000044107	-	87	52.843
ENSAMXG00000036633	-	64	64.444	ENSAMXG00000011804	-	86	66.330
ENSAMXG00000036633	-	67	54.303	ENSAMXG00000036233	-	82	58.784
ENSAMXG00000036633	-	61	62.288	ENSAMXG00000043291	-	71	59.483
ENSAMXG00000036633	-	69	61.607	ENSAMXG00000033124	-	59	69.524
ENSAMXG00000036633	-	62	58.654	ENSAMXG00000044028	-	96	58.763
ENSAMXG00000036633	-	68	54.696	ENSAMXG00000042633	-	99	54.875
ENSAMXG00000036633	-	66	62.109	ENSAMXG00000037981	-	75	59.559
ENSAMXG00000036633	-	66	63.545	ENSAMXG00000039977	-	95	63.605
ENSAMXG00000036633	-	67	56.509	ENSAMXG00000031844	-	89	58.882
ENSAMXG00000036633	-	70	64.356	ENSAMXG00000031009	-	82	64.430
ENSAMXG00000036633	-	64	31.602	ENSAMXG00000002273	patz1	55	42.308
ENSAMXG00000036633	-	66	60.855	ENSAMXG00000037760	-	94	61.745
ENSAMXG00000036633	-	62	60.366	ENSAMXG00000035683	-	91	57.798
ENSAMXG00000036633	-	68	64.356	ENSAMXG00000040212	-	81	64.667
ENSAMXG00000036633	-	81	61.765	ENSAMXG00000043178	-	97	61.194
ENSAMXG00000036633	-	61	65.979	ENSAMXG00000036567	-	76	65.436
ENSAMXG00000036633	-	68	65.278	ENSAMXG00000034847	-	77	65.371
ENSAMXG00000036633	-	61	64.444	ENSAMXG00000040630	-	97	63.265
ENSAMXG00000036633	-	61	38.462	ENSAMXG00000034158	scrt2	54	38.462
ENSAMXG00000036633	-	72	61.565	ENSAMXG00000044110	-	85	61.724
ENSAMXG00000036633	-	68	60.714	ENSAMXG00000042593	-	92	61.538
ENSAMXG00000036633	-	61	61.386	ENSAMXG00000031496	-	86	61.409
ENSAMXG00000036633	-	63	56.538	ENSAMXG00000036257	-	89	57.087
ENSAMXG00000036633	-	63	59.539	ENSAMXG00000039752	-	89	60.067
ENSAMXG00000036633	-	61	43.981	ENSAMXG00000035246	-	63	43.981
ENSAMXG00000036633	-	61	64.356	ENSAMXG00000042275	-	99	64.000
ENSAMXG00000036633	-	68	52.071	ENSAMXG00000009563	-	93	56.478
ENSAMXG00000036633	-	68	60.119	ENSAMXG00000035875	-	99	60.366
ENSAMXG00000036633	-	62	39.373	ENSAMXG00000039622	zbtb41	50	39.373
ENSAMXG00000036633	-	62	63.036	ENSAMXG00000039004	-	94	63.087
ENSAMXG00000036633	-	62	62.500	ENSAMXG00000037717	-	94	60.000
ENSAMXG00000036633	-	61	56.766	ENSAMXG00000026143	-	94	58.667
ENSAMXG00000036633	-	64	56.228	ENSAMXG00000026144	-	96	57.091
ENSAMXG00000036633	-	70	59.603	ENSAMXG00000026142	-	89	59.732
ENSAMXG00000036633	-	62	64.784	ENSAMXG00000038636	-	98	64.983
ENSAMXG00000036633	-	72	43.919	ENSAMXG00000033252	-	92	51.282
ENSAMXG00000036633	-	69	60.596	ENSAMXG00000037923	-	99	60.738
ENSAMXG00000036633	-	62	56.022	ENSAMXG00000030530	-	98	61.433
ENSAMXG00000036633	-	62	54.639	ENSAMXG00000043302	-	75	54.362
ENSAMXG00000036633	-	64	37.681	ENSAMXG00000024907	znf319b	84	39.550
ENSAMXG00000036633	-	66	54.605	ENSAMXG00000032237	-	91	61.333
ENSAMXG00000036633	-	63	45.794	ENSAMXG00000015228	-	57	45.918
ENSAMXG00000036633	-	62	53.684	ENSAMXG00000034333	-	84	53.684
ENSAMXG00000036633	-	64	58.824	ENSAMXG00000029161	-	79	58.824
ENSAMXG00000036633	-	62	64.686	ENSAMXG00000034958	-	95	64.765
ENSAMXG00000036633	-	64	49.394	ENSAMXG00000034857	-	63	50.502

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000036633	-	68	52.764	ENSAOCG00000013672	-	94	55.276	Amphiprion_ocellaris
ENSAMXG00000036633	-	61	53.140	ENSACLG00000008821	-	94	51.613	Astatotilapia_calliptera
ENSAMXG00000036633	-	62	54.266	ENSTSYG00000006246	-	73	54.167	Carlito_syrichta
ENSAMXG00000036633	-	62	48.583	ENSCGRG00001012803	-	76	48.583	Cricetulus_griseus_chok1gshd
ENSAMXG00000036633	-	62	54.386	ENSCGRG00001024303	-	99	52.459	Cricetulus_griseus_chok1gshd
ENSAMXG00000036633	-	62	52.066	ENSCGRG00001019143	-	74	52.174	Cricetulus_griseus_chok1gshd
ENSAMXG00000036633	-	63	50.909	ENSCGRG00000008531	-	88	50.909	Cricetulus_griseus_crigri
ENSAMXG00000036633	-	62	48.583	ENSCGRG00000009742	-	76	48.583	Cricetulus_griseus_crigri
ENSAMXG00000036633	-	69	50.495	ENSEBUG00000017017	-	59	50.842	Eptatretus_burgeri
ENSAMXG00000036633	-	62	43.750	ENSEBUG00000003236	-	93	42.640	Eptatretus_burgeri
ENSAMXG00000036633	-	62	42.157	ENSEBUG00000015993	-	66	40.550	Eptatretus_burgeri
ENSAMXG00000036633	-	67	48.000	ENSEBUG00000007375	-	78	48.136	Eptatretus_burgeri
ENSAMXG00000036633	-	61	49.669	ENSEBUG00000003590	-	72	49.495	Eptatretus_burgeri
ENSAMXG00000036633	-	61	49.338	ENSEBUG00000001121	-	71	49.495	Eptatretus_burgeri
ENSAMXG00000036633	-	72	48.276	ENSEBUG00000015834	-	82	45.833	Eptatretus_burgeri
ENSAMXG00000036633	-	62	54.941	ENSIPUG00000013315	-	93	53.049	Ictalurus_punctatus
ENSAMXG00000036633	-	65	48.980	ENSMAUG00000016437	-	96	49.664	Mesocricetus_auratus
ENSAMXG00000036633	-	60	46.918	ENSMAUG00000005691	-	73	46.494	Mesocricetus_auratus
ENSAMXG00000036633	-	62	45.896	ENSMOCG00000000365	-	73	46.992	Microtus_ochrogaster
ENSAMXG00000036633	-	62	54.054	MGP_CAROLIEiJ_G0018683	Zfp493	79	54.167	Mus_caroli
ENSAMXG00000036633	-	62	50.299	MGP_CAROLIEiJ_G0018660	-	63	46.119	Mus_caroli
ENSAMXG00000036633	-	62	53.293	ENSMUSG00000074824	Rslcan18	67	47.222	Mus_musculus
ENSAMXG00000036633	-	76	63.793	ENSMUSG00000091474	2610021A01Rik	63	58.633	Mus_musculus
ENSAMXG00000036633	-	61	62.143	MGP_PahariEiJ_G0012839	-	66	56.566	Mus_pahari
ENSAMXG00000036633	-	62	50.898	MGP_SPRETEiJ_G0019543	-	65	46.575	Mus_spretus
ENSAMXG00000036633	-	62	46.763	ENSPMAG00000000404	-	99	46.667	Petromyzon_marinus
ENSAMXG00000036633	-	61	64.570	ENSPNAG00000014492	-	91	65.101	Pygocentrus_nattereri
ENSAMXG00000036633	-	66	64.815	ENSPNAG00000003017	-	86	68.333	Pygocentrus_nattereri
ENSAMXG00000036633	-	62	57.143	ENSSSCG00000040389	-	83	58.148	Sus_scrofa
ENSAMXG00000036633	-	62	42.308	ENSTRUG00000014476	-	88	41.935	Takifugu_rubripes