EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000036792 (Gene tree)
Gene ID: 107197088
Gene Symbol: zc3hc1
Alias: zgc:154099
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 25519 bases
Position: chrAPWO02001541.1:13581-39099
Accession: 107197088
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000029644	zf-C3HC	PF07967.13	3.9e-37	1	1
ENSAMXP00000047049	zf-C3HC	PF07967.13	5.1e-37	1	1
ENSAMXP00000029644	Rsm1	PF08600.10	1.2e-12	1	1
ENSAMXP00000047049	Rsm1	PF08600.10	1.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000051189	-	5617	XM_022663059	ENSAMXP00000029644	463 (aa)	XP_022518780	UPI000BBDE533
ENSAMXT00000032288	-	5701	XM_022663058	ENSAMXP00000047049	491 (aa)	XP_022518779	UPI000BBDEAD2

Gene Model

Click here to download ENSAMXG00000036792's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000036792's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000036792	zc3hc1	97	44.628	ENSG00000091732	ZC3HC1	93	46.789	Homo_sapiens
ENSAMXG00000036792	zc3hc1	97	53.263	ENSAPOG00000009078	zc3hc1	95	53.263	Acanthochromis_polyacanthus
ENSAMXG00000036792	zc3hc1	97	43.802	ENSAMEG00000005425	ZC3HC1	94	43.827	Ailuropoda_melanoleuca
ENSAMXG00000036792	zc3hc1	97	50.943	ENSACIG00000019513	zc3hc1	95	50.943	Amphilophus_citrinellus
ENSAMXG00000036792	zc3hc1	97	53.474	ENSAOCG00000024310	zc3hc1	95	53.263	Amphiprion_ocellaris
ENSAMXG00000036792	zc3hc1	99	52.686	ENSAPEG00000004907	zc3hc1	97	52.479	Amphiprion_percula
ENSAMXG00000036792	zc3hc1	84	58.128	ENSATEG00000016898	zc3hc1	83	58.128	Anabas_testudineus
ENSAMXG00000036792	zc3hc1	88	41.801	ENSAPLG00000003832	ZC3HC1	96	41.839	Anas_platyrhynchos
ENSAMXG00000036792	zc3hc1	99	41.717	ENSACAG00000001638	ZC3HC1	97	41.717	Anolis_carolinensis
ENSAMXG00000036792	zc3hc1	97	43.361	ENSANAG00000022213	ZC3HC1	93	46.789	Aotus_nancymaae
ENSAMXG00000036792	zc3hc1	89	56.782	ENSACLG00000025033	zc3hc1	94	56.782	Astatotilapia_calliptera
ENSAMXG00000036792	zc3hc1	97	44.099	ENSBTAG00000011247	ZC3HC1	94	44.099	Bos_taurus
ENSAMXG00000036792	zc3hc1	97	44.906	ENSCJAG00000010536	ZC3HC1	93	48.012	Callithrix_jacchus
ENSAMXG00000036792	zc3hc1	97	42.887	ENSCAFG00000001499	-	93	43.093	Canis_familiaris
ENSAMXG00000036792	zc3hc1	97	42.946	ENSCAFG00000031850	-	94	43.154	Canis_familiaris
ENSAMXG00000036792	zc3hc1	97	42.946	ENSCAFG00000028735	-	94	43.154	Canis_familiaris
ENSAMXG00000036792	zc3hc1	97	42.946	ENSCAFG00000029401	-	93	43.154	Canis_familiaris
ENSAMXG00000036792	zc3hc1	97	42.149	ENSCAFG00020023333	-	94	42.355	Canis_lupus_dingo
ENSAMXG00000036792	zc3hc1	97	42.739	ENSCAFG00020006829	-	94	42.946	Canis_lupus_dingo
ENSAMXG00000036792	zc3hc1	97	39.501	ENSCHIG00000014103	ZC3HC1	94	39.917	Capra_hircus
ENSAMXG00000036792	zc3hc1	97	43.776	ENSTSYG00000002843	ZC3HC1	94	43.776	Carlito_syrichta
ENSAMXG00000036792	zc3hc1	87	36.952	ENSCAPG00000016300	ZC3HC1	86	49.180	Cavia_aperea
ENSAMXG00000036792	zc3hc1	97	43.827	ENSCPOG00000014034	ZC3HC1	93	47.003	Cavia_porcellus
ENSAMXG00000036792	zc3hc1	97	34.656	ENSCCAG00000020384	ZC3HC1	97	41.126	Cebus_capucinus
ENSAMXG00000036792	zc3hc1	97	44.628	ENSCATG00000023130	ZC3HC1	93	46.789	Cercocebus_atys
ENSAMXG00000036792	zc3hc1	83	36.790	ENSCLAG00000008260	ZC3HC1	86	37.037	Chinchilla_lanigera
ENSAMXG00000036792	zc3hc1	73	41.622	ENSCSAG00000009881	ZC3HC1	95	41.622	Chlorocebus_sabaeus
ENSAMXG00000036792	zc3hc1	87	44.240	ENSCHOG00000011846	ZC3HC1	94	44.240	Choloepus_hoffmanni
ENSAMXG00000036792	zc3hc1	97	41.042	ENSCPBG00000017519	ZC3HC1	95	41.042	Chrysemys_picta_bellii
ENSAMXG00000036792	zc3hc1	97	44.606	ENSCANG00000029091	ZC3HC1	93	46.769	Colobus_angolensis_palliatus
ENSAMXG00000036792	zc3hc1	97	43.333	ENSCGRG00001018805	Zc3hc1	94	43.844	Cricetulus_griseus_chok1gshd
ENSAMXG00000036792	zc3hc1	97	42.500	ENSCGRG00000017114	Zc3hc1	94	42.500	Cricetulus_griseus_crigri
ENSAMXG00000036792	zc3hc1	97	50.620	ENSCSEG00000009284	zc3hc1	93	50.620	Cynoglossus_semilaevis
ENSAMXG00000036792	zc3hc1	97	48.517	ENSCVAG00000011566	zc3hc1	94	48.517	Cyprinodon_variegatus
ENSAMXG00000036792	zc3hc1	96	59.052	ENSDARG00000062651	zc3hc1	94	59.052	Danio_rerio
ENSAMXG00000036792	zc3hc1	97	43.064	ENSDNOG00000045016	ZC3HC1	94	43.154	Dasypus_novemcinctus
ENSAMXG00000036792	zc3hc1	97	41.387	ENSDORG00000008697	Zc3hc1	94	41.597	Dipodomys_ordii
ENSAMXG00000036792	zc3hc1	87	45.266	ENSEASG00005008789	ZC3HC1	91	45.497	Equus_asinus_asinus
ENSAMXG00000036792	zc3hc1	97	43.827	ENSECAG00000017886	ZC3HC1	94	43.918	Equus_caballus
ENSAMXG00000036792	zc3hc1	83	39.056	ENSEEUG00000003123	ZC3HC1	77	39.485	Erinaceus_europaeus
ENSAMXG00000036792	zc3hc1	99	50.304	ENSELUG00000023168	zc3hc1	97	51.521	Esox_lucius
ENSAMXG00000036792	zc3hc1	97	43.424	ENSFCAG00000010429	ZC3HC1	94	43.424	Felis_catus
ENSAMXG00000036792	zc3hc1	88	41.084	ENSFALG00000005006	ZC3HC1	95	41.309	Ficedula_albicollis
ENSAMXG00000036792	zc3hc1	97	43.802	ENSFDAG00000019897	ZC3HC1	94	44.099	Fukomys_damarensis
ENSAMXG00000036792	zc3hc1	97	49.578	ENSFHEG00000020149	zc3hc1	95	49.578	Fundulus_heteroclitus
ENSAMXG00000036792	zc3hc1	97	50.531	ENSGMOG00000002914	zc3hc1	95	50.531	Gadus_morhua
ENSAMXG00000036792	zc3hc1	92	43.556	ENSGALG00000008003	ZC3HC1	90	43.556	Gallus_gallus
ENSAMXG00000036792	zc3hc1	99	48.760	ENSGAFG00000016095	zc3hc1	97	48.760	Gambusia_affinis
ENSAMXG00000036792	zc3hc1	96	52.311	ENSGACG00000019706	zc3hc1	94	52.311	Gasterosteus_aculeatus
ENSAMXG00000036792	zc3hc1	78	40.513	ENSGAGG00000016106	ZC3HC1	98	40.513	Gopherus_agassizii
ENSAMXG00000036792	zc3hc1	97	44.835	ENSGGOG00000015504	ZC3HC1	93	47.095	Gorilla_gorilla
ENSAMXG00000036792	zc3hc1	97	54.526	ENSHBUG00000008347	zc3hc1	95	54.526	Haplochromis_burtoni
ENSAMXG00000036792	zc3hc1	97	43.918	ENSHGLG00000005085	ZC3HC1	95	44.754	Heterocephalus_glaber_female
ENSAMXG00000036792	zc3hc1	97	43.918	ENSHGLG00100011395	ZC3HC1	95	44.754	Heterocephalus_glaber_male
ENSAMXG00000036792	zc3hc1	100	49.482	ENSHCOG00000014309	zc3hc1	98	50.518	Hippocampus_comes
ENSAMXG00000036792	zc3hc1	97	43.035	ENSSTOG00000023599	-	94	43.243	Ictidomys_tridecemlineatus
ENSAMXG00000036792	zc3hc1	96	51.579	ENSKMAG00000015315	zc3hc1	88	51.579	Kryptolebias_marmoratus
ENSAMXG00000036792	zc3hc1	97	51.867	ENSLBEG00000017325	zc3hc1	95	51.867	Labrus_bergylta
ENSAMXG00000036792	zc3hc1	78	43.358	ENSLACG00000013032	ZC3HC1	95	43.596	Latimeria_chalumnae
ENSAMXG00000036792	zc3hc1	100	46.573	ENSLOCG00000015963	zc3hc1	99	47.581	Lepisosteus_oculatus
ENSAMXG00000036792	zc3hc1	97	43.621	ENSLAFG00000001292	ZC3HC1	94	43.711	Loxodonta_africana
ENSAMXG00000036792	zc3hc1	97	44.628	ENSMFAG00000030176	ZC3HC1	94	44.628	Macaca_fascicularis
ENSAMXG00000036792	zc3hc1	97	43.711	ENSMMUG00000006155	ZC3HC1	93	46.789	Macaca_mulatta
ENSAMXG00000036792	zc3hc1	97	44.628	ENSMNEG00000011833	ZC3HC1	93	46.789	Macaca_nemestrina
ENSAMXG00000036792	zc3hc1	97	44.628	ENSMLEG00000027328	ZC3HC1	93	46.789	Mandrillus_leucophaeus
ENSAMXG00000036792	zc3hc1	97	52.632	ENSMAMG00000010691	zc3hc1	95	52.632	Mastacembelus_armatus
ENSAMXG00000036792	zc3hc1	97	54.526	ENSMZEG00005007142	zc3hc1	95	54.526	Maylandia_zebra
ENSAMXG00000036792	zc3hc1	92	41.379	ENSMGAG00000002977	ZC3HC1	90	42.609	Meleagris_gallopavo
ENSAMXG00000036792	zc3hc1	83	41.063	ENSMAUG00000017032	Zc3hc1	90	41.063	Mesocricetus_auratus
ENSAMXG00000036792	zc3hc1	97	44.075	ENSMICG00000009167	ZC3HC1	93	45.846	Microcebus_murinus
ENSAMXG00000036792	zc3hc1	97	43.867	ENSMOCG00000015239	Zc3hc1	93	46.526	Microtus_ochrogaster
ENSAMXG00000036792	zc3hc1	87	51.515	ENSMMOG00000002204	zc3hc1	97	51.515	Mola_mola
ENSAMXG00000036792	zc3hc1	100	35.882	ENSMODG00000014630	ZC3HC1	97	35.882	Monodelphis_domestica
ENSAMXG00000036792	zc3hc1	99	52.905	ENSMALG00000014447	zc3hc1	96	52.795	Monopterus_albus
ENSAMXG00000036792	zc3hc1	97	43.154	MGP_CAROLIEiJ_G0028183	Zc3hc1	95	43.991	Mus_caroli
ENSAMXG00000036792	zc3hc1	100	41.352	ENSMUSG00000039130	Zc3hc1	99	42.710	Mus_musculus
ENSAMXG00000036792	zc3hc1	97	39.293	MGP_PahariEiJ_G0021941	Zc3hc1	94	40.000	Mus_pahari
ENSAMXG00000036792	zc3hc1	97	42.827	MGP_SPRETEiJ_G0029183	Zc3hc1	94	43.776	Mus_spretus
ENSAMXG00000036792	zc3hc1	95	43.376	ENSMPUG00000005297	ZC3HC1	91	43.312	Mustela_putorius_furo
ENSAMXG00000036792	zc3hc1	67	37.764	ENSMLUG00000029228	-	94	38.138	Myotis_lucifugus
ENSAMXG00000036792	zc3hc1	97	43.243	ENSMLUG00000000063	-	94	43.478	Myotis_lucifugus
ENSAMXG00000036792	zc3hc1	97	42.742	ENSNGAG00000019014	Zc3hc1	94	43.133	Nannospalax_galili
ENSAMXG00000036792	zc3hc1	97	54.219	ENSNBRG00000004577	zc3hc1	95	54.219	Neolamprologus_brichardi
ENSAMXG00000036792	zc3hc1	97	44.699	ENSNLEG00000012698	ZC3HC1	93	46.769	Nomascus_leucogenys
ENSAMXG00000036792	zc3hc1	97	43.515	ENSMEUG00000011023	ZC3HC1	94	43.305	Notamacropus_eugenii
ENSAMXG00000036792	zc3hc1	63	47.471	ENSOPRG00000007867	-	65	47.471	Ochotona_princeps
ENSAMXG00000036792	zc3hc1	97	43.575	ENSODEG00000014604	ZC3HC1	94	42.623	Octodon_degus
ENSAMXG00000036792	zc3hc1	97	54.622	ENSONIG00000011644	zc3hc1	95	54.622	Oreochromis_niloticus
ENSAMXG00000036792	zc3hc1	87	40.625	ENSOANG00000011460	ZC3HC1	94	40.980	Ornithorhynchus_anatinus
ENSAMXG00000036792	zc3hc1	97	44.008	ENSOCUG00000017137	ZC3HC1	94	44.008	Oryctolagus_cuniculus
ENSAMXG00000036792	zc3hc1	97	51.702	ENSORLG00000014409	zc3hc1	94	51.702	Oryzias_latipes
ENSAMXG00000036792	zc3hc1	97	51.915	ENSORLG00020015874	zc3hc1	94	51.915	Oryzias_latipes_hni
ENSAMXG00000036792	zc3hc1	97	52.128	ENSORLG00015014641	zc3hc1	94	52.128	Oryzias_latipes_hsok
ENSAMXG00000036792	zc3hc1	97	51.168	ENSOMEG00000000215	zc3hc1	94	50.420	Oryzias_melastigma
ENSAMXG00000036792	zc3hc1	97	50.955	ENSOMEG00000020604	zc3hc1	94	50.210	Oryzias_melastigma
ENSAMXG00000036792	zc3hc1	97	38.046	ENSOGAG00000026193	ZC3HC1	94	38.877	Otolemur_garnettii
ENSAMXG00000036792	zc3hc1	97	44.033	ENSOARG00000004907	ZC3HC1	93	44.033	Ovis_aries
ENSAMXG00000036792	zc3hc1	97	44.835	ENSPPAG00000043172	ZC3HC1	93	47.095	Pan_paniscus
ENSAMXG00000036792	zc3hc1	97	43.215	ENSPPRG00000001004	ZC3HC1	94	43.215	Panthera_pardus
ENSAMXG00000036792	zc3hc1	97	43.424	ENSPTIG00000007823	ZC3HC1	94	43.424	Panthera_tigris_altaica
ENSAMXG00000036792	zc3hc1	97	45.041	ENSPTRG00000019685	ZC3HC1	93	47.401	Pan_troglodytes
ENSAMXG00000036792	zc3hc1	97	43.918	ENSPANG00000014229	ZC3HC1	93	47.095	Papio_anubis
ENSAMXG00000036792	zc3hc1	100	49.592	ENSPKIG00000007172	zc3hc1	98	49.592	Paramormyrops_kingsleyae
ENSAMXG00000036792	zc3hc1	92	39.914	ENSPSIG00000016646	ZC3HC1	85	41.648	Pelodiscus_sinensis
ENSAMXG00000036792	zc3hc1	92	49.561	ENSPMGG00000003548	zc3hc1	88	50.787	Periophthalmus_magnuspinnatus
ENSAMXG00000036792	zc3hc1	97	42.620	ENSPEMG00000000514	Zc3hc1	95	43.534	Peromyscus_maniculatus_bairdii
ENSAMXG00000036792	zc3hc1	97	41.841	ENSPCIG00000020619	ZC3HC1	98	42.602	Phascolarctos_cinereus
ENSAMXG00000036792	zc3hc1	97	50.212	ENSPFOG00000003466	zc3hc1	95	50.212	Poecilia_formosa
ENSAMXG00000036792	zc3hc1	97	49.788	ENSPLAG00000022211	zc3hc1	95	49.788	Poecilia_latipinna
ENSAMXG00000036792	zc3hc1	97	49.788	ENSPMEG00000001458	zc3hc1	95	49.788	Poecilia_mexicana
ENSAMXG00000036792	zc3hc1	97	50.000	ENSPREG00000004004	zc3hc1	95	50.000	Poecilia_reticulata
ENSAMXG00000036792	zc3hc1	97	40.206	ENSPPYG00000017998	ZC3HC1	93	55.000	Pongo_abelii
ENSAMXG00000036792	zc3hc1	92	43.392	ENSPCAG00000001182	ZC3HC1	97	43.612	Procavia_capensis
ENSAMXG00000036792	zc3hc1	97	43.685	ENSPCOG00000017354	ZC3HC1	93	45.872	Propithecus_coquereli
ENSAMXG00000036792	zc3hc1	97	41.350	ENSPVAG00000003195	ZC3HC1	94	41.545	Pteropus_vampyrus
ENSAMXG00000036792	zc3hc1	97	54.526	ENSPNYG00000020692	zc3hc1	95	54.526	Pundamilia_nyererei
ENSAMXG00000036792	zc3hc1	98	72.668	ENSPNAG00000020746	zc3hc1	97	72.668	Pygocentrus_nattereri
ENSAMXG00000036792	zc3hc1	97	42.531	ENSRNOG00000010154	Zc3hc1	94	42.531	Rattus_norvegicus
ENSAMXG00000036792	zc3hc1	88	45.642	ENSRBIG00000029409	ZC3HC1	93	48.571	Rhinopithecus_bieti
ENSAMXG00000036792	zc3hc1	97	44.606	ENSRROG00000041831	ZC3HC1	93	46.769	Rhinopithecus_roxellana
ENSAMXG00000036792	zc3hc1	78	56.637	ENSSBOG00000032787	ZC3HC1	93	56.637	Saimiri_boliviensis_boliviensis
ENSAMXG00000036792	zc3hc1	87	45.662	ENSSHAG00000002529	ZC3HC1	92	45.662	Sarcophilus_harrisii
ENSAMXG00000036792	zc3hc1	98	50.417	ENSSFOG00015003667	zc3hc1	91	50.417	Scleropages_formosus
ENSAMXG00000036792	zc3hc1	97	52.720	ENSSMAG00000000647	zc3hc1	85	53.347	Scophthalmus_maximus
ENSAMXG00000036792	zc3hc1	97	53.586	ENSSDUG00000004241	zc3hc1	93	53.586	Seriola_dumerili
ENSAMXG00000036792	zc3hc1	97	53.797	ENSSLDG00000025056	zc3hc1	93	53.797	Seriola_lalandi_dorsalis
ENSAMXG00000036792	zc3hc1	97	38.831	ENSSARG00000012013	ZC3HC1	94	38.831	Sorex_araneus
ENSAMXG00000036792	zc3hc1	97	37.632	ENSSPUG00000000778	ZC3HC1	91	37.632	Sphenodon_punctatus
ENSAMXG00000036792	zc3hc1	97	53.878	ENSSPAG00000020041	zc3hc1	95	53.878	Stegastes_partitus
ENSAMXG00000036792	zc3hc1	97	42.857	ENSSSCG00000016565	ZC3HC1	98	42.347	Sus_scrofa
ENSAMXG00000036792	zc3hc1	96	49.567	ENSTRUG00000020077	zc3hc1	94	49.567	Takifugu_rubripes
ENSAMXG00000036792	zc3hc1	99	49.167	ENSTNIG00000007585	zc3hc1	98	50.108	Tetraodon_nigroviridis
ENSAMXG00000036792	zc3hc1	97	37.267	ENSTBEG00000005216	ZC3HC1	94	37.267	Tupaia_belangeri
ENSAMXG00000036792	zc3hc1	97	43.892	ENSTTRG00000008458	ZC3HC1	99	44.306	Tursiops_truncatus
ENSAMXG00000036792	zc3hc1	97	43.361	ENSUAMG00000020249	ZC3HC1	94	43.478	Ursus_americanus
ENSAMXG00000036792	zc3hc1	97	43.154	ENSUMAG00000009268	ZC3HC1	94	43.182	Ursus_maritimus
ENSAMXG00000036792	zc3hc1	67	40.683	ENSVPAG00000010846	ZC3HC1	63	40.683	Vicugna_pacos
ENSAMXG00000036792	zc3hc1	96	43.497	ENSVVUG00000012386	ZC3HC1	95	44.350	Vulpes_vulpes
ENSAMXG00000036792	zc3hc1	94	45.316	ENSXETG00000033900	zc3hc1	95	45.316	Xenopus_tropicalis
ENSAMXG00000036792	zc3hc1	97	48.218	ENSXCOG00000013570	zc3hc1	95	48.218	Xiphophorus_couchianus
ENSAMXG00000036792	zc3hc1	87	51.869	ENSXMAG00000010979	zc3hc1	92	51.869	Xiphophorus_maculatus