EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000036816 (Gene tree)
Gene ID: 103023834
Gene Symbol: -
Alias: -
Full Name: la-related protein 6-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 3565 bases
Position: chr20:24513441-24517005
Accession: 103023834
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000044137	La	PF05383.17	3.4e-19	1	1
ENSAMXP00000052771	La	PF05383.17	3.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000047848	-	1317	-	ENSAMXP00000052771	438 (aa)	-	-
ENSAMXT00000042251	-	1640	XM_007252485	ENSAMXP00000044137	410 (aa)	XP_007252547	UPI000BBDBA24

Gene Model

Click here to download ENSAMXG00000036816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000036816's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000036816	-	92	40.000	ENSAMXG00000029387	larp6a	63	39.480
ENSAMXG00000036816	-	95	35.730	ENSAMXG00000018956	larp6b	90	35.294

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000036816	-	93	40.920	ENSG00000166173	LARP6	83	41.019	Homo_sapiens
ENSAMXG00000036816	-	98	40.564	ENSAPOG00000021773	larp6a	65	39.262	Acanthochromis_polyacanthus
ENSAMXG00000036816	-	93	40.194	ENSAMEG00000008897	LARP6	98	40.509	Ailuropoda_melanoleuca
ENSAMXG00000036816	-	97	40.087	ENSACIG00000005166	larp6a	88	38.780	Amphilophus_citrinellus
ENSAMXG00000036816	-	98	40.476	ENSAOCG00000002284	larp6a	65	39.177	Amphiprion_ocellaris
ENSAMXG00000036816	-	98	40.476	ENSAPEG00000008077	larp6a	87	39.177	Amphiprion_percula
ENSAMXG00000036816	-	97	40.652	ENSATEG00000004018	larp6a	64	39.348	Anabas_testudineus
ENSAMXG00000036816	-	95	40.714	ENSAPLG00000009914	LARP6	98	40.714	Anas_platyrhynchos
ENSAMXG00000036816	-	93	42.195	ENSACAG00000008613	LARP6	96	43.382	Anolis_carolinensis
ENSAMXG00000036816	-	93	41.106	ENSANAG00000024860	LARP6	83	41.505	Aotus_nancymaae
ENSAMXG00000036816	-	97	40.087	ENSACLG00000018561	larp6a	63	38.780	Astatotilapia_calliptera
ENSAMXG00000036816	-	93	41.546	ENSBTAG00000003915	LARP6	83	42.512	Bos_taurus
ENSAMXG00000036816	-	93	41.404	ENSCJAG00000046236	-	83	41.505	Callithrix_jacchus
ENSAMXG00000036816	-	93	41.106	ENSCJAG00000018642	-	83	41.505	Callithrix_jacchus
ENSAMXG00000036816	-	93	40.777	ENSCAFG00000017616	LARP6	95	41.748	Canis_familiaris
ENSAMXG00000036816	-	93	40.678	ENSCAFG00020007296	LARP6	84	41.646	Canis_lupus_dingo
ENSAMXG00000036816	-	93	41.446	ENSCHIG00000013742	LARP6	83	42.512	Capra_hircus
ENSAMXG00000036816	-	93	40.049	ENSTSYG00000028124	LARP6	83	41.019	Carlito_syrichta
ENSAMXG00000036816	-	93	40.534	ENSCAPG00000015452	LARP6	96	41.262	Cavia_aperea
ENSAMXG00000036816	-	93	40.534	ENSCPOG00000022687	LARP6	83	41.262	Cavia_porcellus
ENSAMXG00000036816	-	93	41.106	ENSCCAG00000036320	LARP6	83	41.505	Cebus_capucinus
ENSAMXG00000036816	-	93	40.865	ENSCATG00000042432	LARP6	83	41.262	Cercocebus_atys
ENSAMXG00000036816	-	93	40.678	ENSCLAG00000007893	LARP6	85	40.647	Chinchilla_lanigera
ENSAMXG00000036816	-	93	40.865	ENSCSAG00000013672	LARP6	83	41.262	Chlorocebus_sabaeus
ENSAMXG00000036816	-	92	41.320	ENSCHOG00000003318	LARP6	85	42.298	Choloepus_hoffmanni
ENSAMXG00000036816	-	95	41.388	ENSCPBG00000010771	LARP6	81	41.866	Chrysemys_picta_bellii
ENSAMXG00000036816	-	93	40.964	ENSCANG00000025833	LARP6	96	41.262	Colobus_angolensis_palliatus
ENSAMXG00000036816	-	91	41.045	ENSCGRG00001024472	Larp6	85	40.783	Cricetulus_griseus_chok1gshd
ENSAMXG00000036816	-	91	41.045	ENSCGRG00000004527	Larp6	85	40.783	Cricetulus_griseus_crigri
ENSAMXG00000036816	-	94	41.395	ENSCSEG00000011196	larp6a	63	40.233	Cynoglossus_semilaevis
ENSAMXG00000036816	-	94	41.531	ENSCVAG00000009605	larp6a	62	40.139	Cyprinodon_variegatus
ENSAMXG00000036816	-	92	40.476	ENSDARG00000005355	larp6a	95	41.667	Danio_rerio
ENSAMXG00000036816	-	93	40.436	ENSDNOG00000042993	LARP6	83	41.505	Dasypus_novemcinctus
ENSAMXG00000036816	-	93	40.876	ENSDORG00000023910	Larp6	85	40.855	Dipodomys_ordii
ENSAMXG00000036816	-	72	52.105	ENSETEG00000020390	LARP6	60	52.105	Echinops_telfairi
ENSAMXG00000036816	-	93	40.436	ENSEASG00005005490	LARP6	61	41.404	Equus_asinus_asinus
ENSAMXG00000036816	-	93	40.436	ENSECAG00000014190	LARP6	90	41.404	Equus_caballus
ENSAMXG00000036816	-	97	38.478	ENSELUG00000007341	larp6a	66	37.637	Esox_lucius
ENSAMXG00000036816	-	93	39.709	ENSFCAG00000001361	LARP6	83	40.723	Felis_catus
ENSAMXG00000036816	-	95	42.118	ENSFALG00000012389	LARP6	89	42.118	Ficedula_albicollis
ENSAMXG00000036816	-	93	41.162	ENSFDAG00000019994	LARP6	82	41.339	Fukomys_damarensis
ENSAMXG00000036816	-	94	41.299	ENSFHEG00000010312	larp6a	61	39.907	Fundulus_heteroclitus
ENSAMXG00000036816	-	95	41.289	ENSGALG00000004046	LARP6	85	41.289	Gallus_gallus
ENSAMXG00000036816	-	94	41.492	ENSGAFG00000009426	larp6a	63	40.093	Gambusia_affinis
ENSAMXG00000036816	-	94	40.741	ENSGACG00000014622	larp6a	96	39.583	Gasterosteus_aculeatus
ENSAMXG00000036816	-	83	40.489	ENSGAGG00000010802	LARP6	54	40.761	Gopherus_agassizii
ENSAMXG00000036816	-	93	41.019	ENSGGOG00000024151	LARP6	96	41.019	Gorilla_gorilla
ENSAMXG00000036816	-	97	40.087	ENSHBUG00000021014	larp6a	63	38.780	Haplochromis_burtoni
ENSAMXG00000036816	-	93	41.646	ENSHGLG00000015112	LARP6	85	41.096	Heterocephalus_glaber_female
ENSAMXG00000036816	-	93	41.748	ENSHGLG00100013159	LARP6	96	42.169	Heterocephalus_glaber_male
ENSAMXG00000036816	-	92	40.143	ENSHCOG00000001241	larp6a	80	39.529	Hippocampus_comes
ENSAMXG00000036816	-	93	39.907	ENSIPUG00000010187	larp6	68	38.462	Ictalurus_punctatus
ENSAMXG00000036816	-	99	65.228	ENSIPUG00000002828	-	98	64.951	Ictalurus_punctatus
ENSAMXG00000036816	-	93	40.534	ENSSTOG00000024279	LARP6	91	40.367	Ictidomys_tridecemlineatus
ENSAMXG00000036816	-	93	40.338	ENSJJAG00000011013	Larp6	84	40.865	Jaculus_jaculus
ENSAMXG00000036816	-	94	41.628	ENSKMAG00000001702	larp6a	58	40.233	Kryptolebias_marmoratus
ENSAMXG00000036816	-	94	40.326	ENSLBEG00000000170	larp6a	81	39.394	Labrus_bergylta
ENSAMXG00000036816	-	93	42.506	ENSLACG00000018706	LARP6	80	43.095	Latimeria_chalumnae
ENSAMXG00000036816	-	96	50.594	ENSLACG00000002786	-	99	50.835	Latimeria_chalumnae
ENSAMXG00000036816	-	93	42.373	ENSLOCG00000014592	larp6a	61	42.308	Lepisosteus_oculatus
ENSAMXG00000036816	-	96	56.429	ENSLOCG00000008547	-	83	56.802	Lepisosteus_oculatus
ENSAMXG00000036816	-	93	41.162	ENSLAFG00000016343	LARP6	91	42.067	Loxodonta_africana
ENSAMXG00000036816	-	93	40.964	ENSMFAG00000035507	LARP6	91	41.262	Macaca_fascicularis
ENSAMXG00000036816	-	93	40.865	ENSMMUG00000004429	LARP6	85	41.262	Macaca_mulatta
ENSAMXG00000036816	-	93	40.865	ENSMNEG00000045335	LARP6	83	41.262	Macaca_nemestrina
ENSAMXG00000036816	-	93	40.964	ENSMLEG00000038587	LARP6	96	41.262	Mandrillus_leucophaeus
ENSAMXG00000036816	-	98	40.260	ENSMAMG00000005261	larp6a	65	39.177	Mastacembelus_armatus
ENSAMXG00000036816	-	97	40.087	ENSMZEG00005005774	larp6a	63	38.780	Maylandia_zebra
ENSAMXG00000036816	-	95	41.966	ENSMGAG00000005077	LARP6	99	42.446	Meleagris_gallopavo
ENSAMXG00000036816	-	93	40.821	ENSMAUG00000018486	Larp6	85	40.503	Mesocricetus_auratus
ENSAMXG00000036816	-	93	40.049	ENSMICG00000011234	LARP6	83	40.723	Microcebus_murinus
ENSAMXG00000036816	-	91	42.040	ENSMOCG00000010492	Larp6	85	41.705	Microtus_ochrogaster
ENSAMXG00000036816	-	98	40.347	ENSMMOG00000016284	larp6a	88	39.254	Mola_mola
ENSAMXG00000036816	-	95	40.618	ENSMODG00000009034	LARP6	81	40.714	Monodelphis_domestica
ENSAMXG00000036816	-	94	40.972	ENSMALG00000014439	larp6a	81	39.815	Monopterus_albus
ENSAMXG00000036816	-	93	41.546	MGP_CAROLIEiJ_G0032314	Larp6	85	41.014	Mus_caroli
ENSAMXG00000036816	-	93	41.787	ENSMUSG00000034839	Larp6	85	41.244	Mus_musculus
ENSAMXG00000036816	-	93	41.304	MGP_PahariEiJ_G0015180	Larp6	85	40.783	Mus_pahari
ENSAMXG00000036816	-	93	41.304	MGP_SPRETEiJ_G0033452	Larp6	85	40.783	Mus_spretus
ENSAMXG00000036816	-	93	40.777	ENSMPUG00000017086	LARP6	95	41.262	Mustela_putorius_furo
ENSAMXG00000036816	-	95	40.095	ENSMLUG00000010319	LARP6	84	40.334	Myotis_lucifugus
ENSAMXG00000036816	-	91	41.791	ENSNGAG00000014238	Larp6	85	42.755	Nannospalax_galili
ENSAMXG00000036816	-	97	40.087	ENSNBRG00000008120	larp6a	87	38.780	Neolamprologus_brichardi
ENSAMXG00000036816	-	93	40.920	ENSNLEG00000013691	LARP6	83	41.019	Nomascus_leucogenys
ENSAMXG00000036816	-	81	48.333	ENSMEUG00000002270	LARP6	65	50.000	Notamacropus_eugenii
ENSAMXG00000036816	-	69	42.177	ENSOPRG00000004868	-	97	40.896	Ochotona_princeps
ENSAMXG00000036816	-	93	40.887	ENSODEG00000015958	LARP6	83	41.446	Octodon_degus
ENSAMXG00000036816	-	94	41.395	ENSONIG00000002901	larp6a	87	38.612	Oreochromis_niloticus
ENSAMXG00000036816	-	92	40.561	ENSOCUG00000009306	LARP6	99	39.953	Oryctolagus_cuniculus
ENSAMXG00000036816	-	97	41.048	ENSORLG00000014256	larp6a	89	39.514	Oryzias_latipes
ENSAMXG00000036816	-	98	40.693	ENSORLG00020019657	larp6a	66	39.168	Oryzias_latipes_hni
ENSAMXG00000036816	-	98	40.909	ENSORLG00015017915	larp6a	66	39.387	Oryzias_latipes_hsok
ENSAMXG00000036816	-	98	41.558	ENSOMEG00000017049	larp6a	66	40.044	Oryzias_melastigma
ENSAMXG00000036816	-	93	40.000	ENSOGAG00000000522	LARP6	83	40.678	Otolemur_garnettii
ENSAMXG00000036816	-	93	41.546	ENSOARG00000018750	LARP6	98	41.458	Ovis_aries
ENSAMXG00000036816	-	93	41.019	ENSPPAG00000031247	LARP6	96	41.019	Pan_paniscus
ENSAMXG00000036816	-	93	39.709	ENSPPRG00000011282	LARP6	83	40.723	Panthera_pardus
ENSAMXG00000036816	-	93	39.806	ENSPTIG00000015318	LARP6	83	40.723	Panthera_tigris_altaica
ENSAMXG00000036816	-	93	40.920	ENSPTRG00000007234	LARP6	83	41.019	Pan_troglodytes
ENSAMXG00000036816	-	93	40.865	ENSPANG00000016362	LARP6	83	41.262	Papio_anubis
ENSAMXG00000036816	-	94	40.046	ENSPKIG00000004511	LARP6	63	39.726	Paramormyrops_kingsleyae
ENSAMXG00000036816	-	91	42.250	ENSPKIG00000020103	larp6a	78	40.541	Paramormyrops_kingsleyae
ENSAMXG00000036816	-	63	67.000	ENSPSIG00000009071	LARP6	81	67.000	Pelodiscus_sinensis
ENSAMXG00000036816	-	98	40.659	ENSPMGG00000006958	larp6a	89	39.427	Periophthalmus_magnuspinnatus
ENSAMXG00000036816	-	91	40.299	ENSPEMG00000012909	Larp6	85	40.185	Peromyscus_maniculatus_bairdii
ENSAMXG00000036816	-	95	42.280	ENSPCIG00000020765	LARP6	81	42.381	Phascolarctos_cinereus
ENSAMXG00000036816	-	94	41.259	ENSPFOG00000014175	larp6a	81	39.860	Poecilia_formosa
ENSAMXG00000036816	-	94	41.435	ENSPLAG00000011105	larp6a	60	40.046	Poecilia_latipinna
ENSAMXG00000036816	-	94	41.259	ENSPMEG00000011085	larp6a	60	39.860	Poecilia_mexicana
ENSAMXG00000036816	-	94	40.559	ENSPREG00000008067	larp6a	61	39.161	Poecilia_reticulata
ENSAMXG00000036816	-	93	40.920	ENSPPYG00000006604	LARP6	83	41.019	Pongo_abelii
ENSAMXG00000036816	-	64	51.572	ENSPCAG00000014197	LARP6	62	51.572	Procavia_capensis
ENSAMXG00000036816	-	93	40.436	ENSPCOG00000022934	LARP6	83	41.404	Propithecus_coquereli
ENSAMXG00000036816	-	93	41.646	ENSPVAG00000005618	LARP6	83	42.615	Pteropus_vampyrus
ENSAMXG00000036816	-	97	40.087	ENSPNYG00000009835	larp6a	87	38.780	Pundamilia_nyererei
ENSAMXG00000036816	-	92	40.941	ENSPNAG00000017966	larp6a	69	40.426	Pygocentrus_nattereri
ENSAMXG00000036816	-	93	42.029	ENSRNOG00000012438	Larp6	85	42.105	Rattus_norvegicus
ENSAMXG00000036816	-	93	41.162	ENSRBIG00000032902	LARP6	84	41.262	Rhinopithecus_bieti
ENSAMXG00000036816	-	93	41.162	ENSRROG00000043074	LARP6	83	41.505	Rhinopithecus_roxellana
ENSAMXG00000036816	-	93	41.446	ENSSBOG00000024190	LARP6	96	41.748	Saimiri_boliviensis_boliviensis
ENSAMXG00000036816	-	95	40.714	ENSSHAG00000018495	LARP6	99	40.682	Sarcophilus_harrisii
ENSAMXG00000036816	-	94	40.695	ENSSFOG00015002254	LARP6	79	40.447	Scleropages_formosus
ENSAMXG00000036816	-	94	41.707	ENSSFOG00015023268	larp6a	82	41.928	Scleropages_formosus
ENSAMXG00000036816	-	94	41.492	ENSSMAG00000009953	larp6a	60	40.326	Scophthalmus_maximus
ENSAMXG00000036816	-	94	41.531	ENSSDUG00000007438	larp6a	65	39.177	Seriola_dumerili
ENSAMXG00000036816	-	94	41.531	ENSSLDG00000016647	larp6a	65	39.177	Seriola_lalandi_dorsalis
ENSAMXG00000036816	-	93	42.683	ENSSPUG00000011312	LARP6	96	41.912	Sphenodon_punctatus
ENSAMXG00000036816	-	98	40.476	ENSSPAG00000020502	larp6a	65	39.177	Stegastes_partitus
ENSAMXG00000036816	-	93	41.505	ENSSSCG00000004974	LARP6	83	41.990	Sus_scrofa
ENSAMXG00000036816	-	95	42.105	ENSTGUG00000005808	LARP6	98	41.866	Taeniopygia_guttata
ENSAMXG00000036816	-	93	41.822	ENSTRUG00000003151	larp6a	62	41.121	Takifugu_rubripes
ENSAMXG00000036816	-	98	41.667	ENSTNIG00000011926	larp6a	93	39.732	Tetraodon_nigroviridis
ENSAMXG00000036816	-	93	41.505	ENSTBEG00000015077	LARP6	96	41.748	Tupaia_belangeri
ENSAMXG00000036816	-	93	40.482	ENSUAMG00000010467	LARP6	82	41.748	Ursus_americanus
ENSAMXG00000036816	-	93	40.777	ENSVVUG00000015227	LARP6	91	41.748	Vulpes_vulpes
ENSAMXG00000036816	-	93	41.379	ENSXETG00000020340	larp6	84	40.670	Xenopus_tropicalis
ENSAMXG00000036816	-	94	40.559	ENSXCOG00000012654	larp6a	85	39.161	Xiphophorus_couchianus
ENSAMXG00000036816	-	94	41.667	ENSXMAG00000021015	larp6a	58	40.278	Xiphophorus_maculatus