EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000036838 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 5267 bases
Position: chr23:9603669-9608935
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000030079	RRM_1	PF00076.22	1.9e-15	1	1
ENSAMXP00000042457	RRM_1	PF00076.22	2.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000053720	-	396	-	ENSAMXP00000042457	131 (aa)	-	-
ENSAMXT00000051901	-	357	-	ENSAMXP00000030079	118 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000036838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000036838's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000036838	-	54	36.364	ENSAMXG00000018693	slirp	66	36.364
ENSAMXG00000036838	-	62	36.986	ENSAMXG00000042924	-	88	38.356

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000036838	-	64	89.333	ENSAOCG00000012598	zgc:165603	63	71.698	Amphiprion_ocellaris
ENSAMXG00000036838	-	78	88.462	ENSBTAG00000019131	CELF3	57	88.462	Bos_taurus
ENSAMXG00000036838	-	78	88.462	ENSCHIG00000025847	CELF3	56	89.610	Capra_hircus
ENSAMXG00000036838	-	78	88.462	ENSTSYG00000033066	CELF3	64	88.462	Carlito_syrichta
ENSAMXG00000036838	-	78	88.462	ENSCLAG00000000586	CELF3	64	88.462	Chinchilla_lanigera
ENSAMXG00000036838	-	69	87.654	ENSCVAG00000005395	zgc:165603	53	87.654	Cyprinodon_variegatus
ENSAMXG00000036838	-	69	87.654	ENSDARG00000098702	zgc:165603	52	87.654	Danio_rerio
ENSAMXG00000036838	-	87	77.670	ENSHCOG00000014147	-	69	96.000	Hippocampus_comes
ENSAMXG00000036838	-	90	71.028	ENSLACG00000009899	zgc:165603	78	77.551	Latimeria_chalumnae
ENSAMXG00000036838	-	78	88.462	ENSMAUG00000007850	Celf3	64	88.462	Mesocricetus_auratus
ENSAMXG00000036838	-	78	78.205	ENSMUSG00000034818	Celf5	72	37.313	Mus_musculus
ENSAMXG00000036838	-	72	78.205	MGP_SPRETEiJ_G0016461	Celf5	72	37.313	Mus_spretus
ENSAMXG00000036838	-	87	75.000	ENSPKIG00000018966	zgc:165603	68	71.304	Paramormyrops_kingsleyae
ENSAMXG00000036838	-	72	86.047	ENSPLAG00000009650	zgc:165603	50	80.435	Poecilia_latipinna
ENSAMXG00000036838	-	85	72.973	ENSPMEG00000003804	zgc:165603	91	66.929	Poecilia_mexicana
ENSAMXG00000036838	-	78	88.462	ENSSBOG00000021984	CELF3	51	89.610	Saimiri_boliviensis_boliviensis
ENSAMXG00000036838	-	66	39.744	ENSXETG00000012296	celf3	55	39.744	Xenopus_tropicalis