EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000036897 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 2338 bases
Position: chrAPWO02000349.1:79666-82003
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000043198	RVT_1	PF00078.27	5.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000056177	-	2338	-	ENSAMXP00000043198	723 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000036897's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000036897's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000036897	-	86	66.773	ENSAMXG00000043875	-	90	68.130
ENSAMXG00000036897	-	83	46.741	ENSAMXG00000038544	-	93	46.741
ENSAMXG00000036897	-	99	64.738	ENSAMXG00000033831	-	94	65.229
ENSAMXG00000036897	-	87	47.264	ENSAMXG00000040915	-	72	49.588
ENSAMXG00000036897	-	99	67.445	ENSAMXG00000042699	-	65	67.445
ENSAMXG00000036897	-	85	90.177	ENSAMXG00000029689	-	83	90.177
ENSAMXG00000036897	-	90	46.586	ENSAMXG00000041694	-	69	46.586
ENSAMXG00000036897	-	84	46.939	ENSAMXG00000030934	-	96	46.939

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000036897	-	81	34.891	ENSACAG00000029367	-	86	35.358	Anolis_carolinensis
ENSAMXG00000036897	-	88	46.022	ENSIPUG00000009957	-	95	45.609	Ictalurus_punctatus
ENSAMXG00000036897	-	90	44.193	ENSIPUG00000020583	-	91	44.193	Ictalurus_punctatus
ENSAMXG00000036897	-	80	48.722	ENSIPUG00000023478	-	89	48.722	Ictalurus_punctatus
ENSAMXG00000036897	-	90	42.965	ENSIPUG00000000467	-	86	42.814	Ictalurus_punctatus
ENSAMXG00000036897	-	83	39.409	ENSKMAG00000021728	-	90	39.409	Kryptolebias_marmoratus
ENSAMXG00000036897	-	84	36.609	ENSORLG00000025074	-	88	36.971	Oryzias_latipes
ENSAMXG00000036897	-	93	37.666	ENSORLG00000027546	-	93	37.781	Oryzias_latipes
ENSAMXG00000036897	-	92	35.517	ENSORLG00020019360	-	96	35.517	Oryzias_latipes_hni
ENSAMXG00000036897	-	92	35.536	ENSORLG00020008270	-	95	35.536	Oryzias_latipes_hni
ENSAMXG00000036897	-	82	37.255	ENSORLG00020018037	-	89	37.562	Oryzias_latipes_hni
ENSAMXG00000036897	-	78	44.974	ENSPKIG00000000452	-	89	44.254	Paramormyrops_kingsleyae
ENSAMXG00000036897	-	81	43.197	ENSPKIG00000021000	-	95	43.434	Paramormyrops_kingsleyae
ENSAMXG00000036897	-	91	51.267	ENSPNAG00000003267	-	99	51.565	Pygocentrus_nattereri
ENSAMXG00000036897	-	80	58.935	ENSPNAG00000014076	-	90	58.935	Pygocentrus_nattereri