EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000036947 (Gene tree)
Gene ID: 103032561
Gene Symbol: ercc3
Alias: wu:fc25f08|xpb
Full Name: ERCC excision repair 3%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 32066 bases
Position: chr10:8166878-8198943
Accession: 103032561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000040528	ResIII	PF04851.15	9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000050580	-	3766	XM_022673457	ENSAMXP00000040528	781 (aa)	XP_022529178	UPI000BBDA573

Gene Model

Click here to download ENSAMXG00000036947's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03022	Basal transcription factors	KEGG
amex03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000036947's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000036947	ercc3	100	87.117	ENSG00000163161	ERCC3	99	96.273	Homo_sapiens
ENSAMXG00000036947	ercc3	100	93.103	ENSAPOG00000014383	ercc3	100	93.103	Acanthochromis_polyacanthus
ENSAMXG00000036947	ercc3	100	87.117	ENSAMEG00000016840	ERCC3	100	87.628	Ailuropoda_melanoleuca
ENSAMXG00000036947	ercc3	99	91.871	ENSACIG00000000126	ercc3	100	91.871	Amphilophus_citrinellus
ENSAMXG00000036947	ercc3	100	92.976	ENSAOCG00000009396	ercc3	100	93.231	Amphiprion_ocellaris
ENSAMXG00000036947	ercc3	100	92.976	ENSAPEG00000023077	ercc3	100	93.231	Amphiprion_percula
ENSAMXG00000036947	ercc3	100	93.231	ENSATEG00000014860	ercc3	100	93.359	Anabas_testudineus
ENSAMXG00000036947	ercc3	91	89.281	ENSAPLG00000012068	ERCC3	98	89.281	Anas_platyrhynchos
ENSAMXG00000036947	ercc3	92	89.444	ENSACAG00000009919	ERCC3	100	89.444	Anolis_carolinensis
ENSAMXG00000036947	ercc3	100	86.990	ENSANAG00000031091	ERCC3	100	86.990	Aotus_nancymaae
ENSAMXG00000036947	ercc3	100	92.848	ENSACLG00000022508	ercc3	100	92.848	Astatotilapia_calliptera
ENSAMXG00000036947	ercc3	100	86.990	ENSBTAG00000020777	ERCC3	100	86.990	Bos_taurus
ENSAMXG00000036947	ercc3	99	62.030	WBGene00013441	xpb-1	99	62.281	Caenorhabditis_elegans
ENSAMXG00000036947	ercc3	100	87.117	ENSCJAG00000010416	ERCC3	100	87.117	Callithrix_jacchus
ENSAMXG00000036947	ercc3	96	88.992	ENSCAFG00000004497	ERCC3	100	87.212	Canis_familiaris
ENSAMXG00000036947	ercc3	96	88.992	ENSCAFG00020003495	ERCC3	100	87.212	Canis_lupus_dingo
ENSAMXG00000036947	ercc3	100	87.372	ENSCHIG00000014551	ERCC3	100	87.372	Capra_hircus
ENSAMXG00000036947	ercc3	99	87.193	ENSTSYG00000004137	ERCC3	99	87.193	Carlito_syrichta
ENSAMXG00000036947	ercc3	78	80.656	ENSCAPG00000017027	ERCC3	93	80.392	Cavia_aperea
ENSAMXG00000036947	ercc3	100	86.097	ENSCPOG00000002144	ERCC3	100	86.607	Cavia_porcellus
ENSAMXG00000036947	ercc3	100	87.117	ENSCCAG00000024421	ERCC3	100	87.117	Cebus_capucinus
ENSAMXG00000036947	ercc3	100	87.117	ENSCATG00000032313	ERCC3	100	87.117	Cercocebus_atys
ENSAMXG00000036947	ercc3	100	86.607	ENSCLAG00000002965	ERCC3	96	86.990	Chinchilla_lanigera
ENSAMXG00000036947	ercc3	100	86.990	ENSCSAG00000016827	ERCC3	100	86.990	Chlorocebus_sabaeus
ENSAMXG00000036947	ercc3	83	94.737	ENSCHOG00000007414	ERCC3	83	94.737	Choloepus_hoffmanni
ENSAMXG00000036947	ercc3	92	89.583	ENSCPBG00000013638	ERCC3	100	89.583	Chrysemys_picta_bellii
ENSAMXG00000036947	ercc3	96	71.838	ENSCING00000002867	ercc3	96	71.838	Ciona_intestinalis
ENSAMXG00000036947	ercc3	100	87.245	ENSCANG00000007094	ERCC3	100	87.245	Colobus_angolensis_palliatus
ENSAMXG00000036947	ercc3	100	87.117	ENSCGRG00001009426	Ercc3	100	87.628	Cricetulus_griseus_chok1gshd
ENSAMXG00000036947	ercc3	97	86.597	ENSCGRG00000015547	Ercc3	100	87.122	Cricetulus_griseus_crigri
ENSAMXG00000036947	ercc3	100	90.191	ENSCSEG00000016479	ercc3	100	90.191	Cynoglossus_semilaevis
ENSAMXG00000036947	ercc3	100	92.082	ENSCVAG00000015177	ercc3	100	92.082	Cyprinodon_variegatus
ENSAMXG00000036947	ercc3	98	93.864	ENSDARG00000002402	ercc3	100	93.223	Danio_rerio
ENSAMXG00000036947	ercc3	56	93.197	ENSDNOG00000035027	ERCC3	95	93.197	Dasypus_novemcinctus
ENSAMXG00000036947	ercc3	97	89.418	ENSDORG00000004671	Ercc3	100	87.867	Dipodomys_ordii
ENSAMXG00000036947	ercc3	99	68.750	FBgn0001179	hay	99	68.414	Drosophila_melanogaster
ENSAMXG00000036947	ercc3	90	88.676	ENSETEG00000019887	ERCC3	90	88.676	Echinops_telfairi
ENSAMXG00000036947	ercc3	100	79.672	ENSEBUG00000009773	ercc3	99	80.253	Eptatretus_burgeri
ENSAMXG00000036947	ercc3	100	84.577	ENSEASG00005022466	ERCC3	100	85.075	Equus_asinus_asinus
ENSAMXG00000036947	ercc3	100	87.245	ENSECAG00000006589	ERCC3	100	87.245	Equus_caballus
ENSAMXG00000036947	ercc3	93	88.098	ENSEEUG00000001057	ERCC3	99	88.098	Erinaceus_europaeus
ENSAMXG00000036947	ercc3	100	91.964	ENSELUG00000000089	ercc3	99	91.964	Esox_lucius
ENSAMXG00000036947	ercc3	100	86.352	ENSFCAG00000006989	ERCC3	100	86.862	Felis_catus
ENSAMXG00000036947	ercc3	99	86.452	ENSFALG00000003936	ERCC3	99	86.452	Ficedula_albicollis
ENSAMXG00000036947	ercc3	100	86.352	ENSFDAG00000011924	ERCC3	100	86.352	Fukomys_damarensis
ENSAMXG00000036947	ercc3	100	91.699	ENSFHEG00000005185	ercc3	100	91.699	Fundulus_heteroclitus
ENSAMXG00000036947	ercc3	100	90.537	ENSGMOG00000018032	ercc3	99	90.537	Gadus_morhua
ENSAMXG00000036947	ercc3	97	87.963	ENSGALG00000011515	ERCC3	100	86.445	Gallus_gallus
ENSAMXG00000036947	ercc3	100	91.826	ENSGAFG00000011936	ercc3	100	91.826	Gambusia_affinis
ENSAMXG00000036947	ercc3	100	90.828	ENSGACG00000015218	ercc3	99	92.033	Gasterosteus_aculeatus
ENSAMXG00000036947	ercc3	92	90.000	ENSGAGG00000018579	ERCC3	100	90.000	Gopherus_agassizii
ENSAMXG00000036947	ercc3	100	87.117	ENSGGOG00000015255	ERCC3	100	87.117	Gorilla_gorilla
ENSAMXG00000036947	ercc3	100	92.848	ENSHBUG00000003818	ercc3	100	92.848	Haplochromis_burtoni
ENSAMXG00000036947	ercc3	100	86.735	ENSHGLG00000011014	ERCC3	100	87.117	Heterocephalus_glaber_female
ENSAMXG00000036947	ercc3	100	86.735	ENSHGLG00100013806	ERCC3	100	87.117	Heterocephalus_glaber_male
ENSAMXG00000036947	ercc3	100	90.537	ENSHCOG00000016924	ercc3	100	90.537	Hippocampus_comes
ENSAMXG00000036947	ercc3	100	93.223	ENSIPUG00000021000	ercc3	100	93.223	Ictalurus_punctatus
ENSAMXG00000036947	ercc3	100	87.245	ENSSTOG00000011001	ERCC3	100	87.755	Ictidomys_tridecemlineatus
ENSAMXG00000036947	ercc3	90	87.553	ENSJJAG00000001117	Ercc3	100	87.553	Jaculus_jaculus
ENSAMXG00000036947	ercc3	100	92.082	ENSKMAG00000021764	ercc3	100	92.082	Kryptolebias_marmoratus
ENSAMXG00000036947	ercc3	100	91.944	ENSLBEG00000000468	ercc3	100	91.944	Labrus_bergylta
ENSAMXG00000036947	ercc3	96	84.967	ENSLACG00000014815	ERCC3	100	83.522	Latimeria_chalumnae
ENSAMXG00000036947	ercc3	90	89.250	ENSLOCG00000010907	ercc3	87	89.250	Lepisosteus_oculatus
ENSAMXG00000036947	ercc3	100	86.862	ENSLAFG00000014866	ERCC3	100	87.372	Loxodonta_africana
ENSAMXG00000036947	ercc3	100	87.117	ENSMFAG00000003370	ERCC3	100	87.117	Macaca_fascicularis
ENSAMXG00000036947	ercc3	100	83.375	ENSMNEG00000004215	ERCC3	100	83.375	Macaca_nemestrina
ENSAMXG00000036947	ercc3	100	87.117	ENSMLEG00000042061	ERCC3	100	87.117	Mandrillus_leucophaeus
ENSAMXG00000036947	ercc3	100	92.199	ENSMAMG00000004505	ercc3	99	92.199	Mastacembelus_armatus
ENSAMXG00000036947	ercc3	100	92.848	ENSMZEG00005004854	ercc3	100	92.848	Maylandia_zebra
ENSAMXG00000036947	ercc3	90	88.952	ENSMGAG00000011706	ERCC3	100	88.952	Meleagris_gallopavo
ENSAMXG00000036947	ercc3	100	86.752	ENSMAUG00000004515	Ercc3	100	87.389	Mesocricetus_auratus
ENSAMXG00000036947	ercc3	100	86.990	ENSMICG00000009578	ERCC3	100	87.500	Microcebus_murinus
ENSAMXG00000036947	ercc3	100	86.990	ENSMOCG00000021767	Ercc3	100	87.500	Microtus_ochrogaster
ENSAMXG00000036947	ercc3	99	91.332	ENSMMOG00000018174	ercc3	99	91.332	Mola_mola
ENSAMXG00000036947	ercc3	97	89.153	ENSMODG00000018695	ERCC3	100	88.138	Monodelphis_domestica
ENSAMXG00000036947	ercc3	100	91.315	ENSMALG00000014944	ercc3	100	91.571	Monopterus_albus
ENSAMXG00000036947	ercc3	100	87.372	MGP_CAROLIEiJ_G0022075	Ercc3	100	87.883	Mus_caroli
ENSAMXG00000036947	ercc3	100	87.643	ENSMUSG00000024382	Ercc3	100	88.153	Mus_musculus
ENSAMXG00000036947	ercc3	100	87.372	MGP_PahariEiJ_G0018809	Ercc3	100	87.883	Mus_pahari
ENSAMXG00000036947	ercc3	100	87.389	MGP_SPRETEiJ_G0022987	Ercc3	100	87.898	Mus_spretus
ENSAMXG00000036947	ercc3	100	86.735	ENSMPUG00000012021	ERCC3	100	87.245	Mustela_putorius_furo
ENSAMXG00000036947	ercc3	93	84.986	ENSMLUG00000007429	ERCC3	99	84.986	Myotis_lucifugus
ENSAMXG00000036947	ercc3	97	86.257	ENSNGAG00000019598	Ercc3	99	88.995	Nannospalax_galili
ENSAMXG00000036947	ercc3	100	92.848	ENSNBRG00000019074	ercc3	100	92.848	Neolamprologus_brichardi
ENSAMXG00000036947	ercc3	92	86.787	ENSNLEG00000015665	ERCC3	97	86.787	Nomascus_leucogenys
ENSAMXG00000036947	ercc3	100	85.842	ENSOPRG00000004553	ERCC3	100	85.842	Ochotona_princeps
ENSAMXG00000036947	ercc3	100	87.117	ENSODEG00000005795	ERCC3	100	87.500	Octodon_degus
ENSAMXG00000036947	ercc3	100	92.593	ENSONIG00000003255	ercc3	100	92.593	Oreochromis_niloticus
ENSAMXG00000036947	ercc3	100	86.990	ENSOCUG00000002248	ERCC3	100	87.500	Oryctolagus_cuniculus
ENSAMXG00000036947	ercc3	100	91.443	ENSORLG00000004393	ercc3	100	91.443	Oryzias_latipes
ENSAMXG00000036947	ercc3	100	91.327	ENSORLG00020017718	ercc3	99	92.547	Oryzias_latipes_hni
ENSAMXG00000036947	ercc3	100	91.443	ENSORLG00015015695	ercc3	100	91.443	Oryzias_latipes_hsok
ENSAMXG00000036947	ercc3	100	91.699	ENSOMEG00000015374	ercc3	100	91.699	Oryzias_melastigma
ENSAMXG00000036947	ercc3	100	87.023	ENSOGAG00000009103	ERCC3	100	87.532	Otolemur_garnettii
ENSAMXG00000036947	ercc3	100	87.245	ENSOARG00000016147	ERCC3	100	87.245	Ovis_aries
ENSAMXG00000036947	ercc3	100	87.117	ENSPPAG00000036166	ERCC3	100	87.117	Pan_paniscus
ENSAMXG00000036947	ercc3	100	86.480	ENSPPRG00000001305	ERCC3	100	86.990	Panthera_pardus
ENSAMXG00000036947	ercc3	92	88.750	ENSPTIG00000016969	ERCC3	100	88.750	Panthera_tigris_altaica
ENSAMXG00000036947	ercc3	100	87.117	ENSPTRG00000046940	ERCC3	100	87.117	Pan_troglodytes
ENSAMXG00000036947	ercc3	100	87.117	ENSPANG00000007699	ERCC3	100	87.117	Papio_anubis
ENSAMXG00000036947	ercc3	100	92.976	ENSPKIG00000001319	ercc3	100	94.305	Paramormyrops_kingsleyae
ENSAMXG00000036947	ercc3	92	89.444	ENSPSIG00000014682	ERCC3	100	89.444	Pelodiscus_sinensis
ENSAMXG00000036947	ercc3	96	92.042	ENSPMGG00000017885	ercc3	99	90.537	Periophthalmus_magnuspinnatus
ENSAMXG00000036947	ercc3	100	87.372	ENSPEMG00000013733	Ercc3	100	87.883	Peromyscus_maniculatus_bairdii
ENSAMXG00000036947	ercc3	90	79.028	ENSPMAG00000005081	ercc3	99	79.028	Petromyzon_marinus
ENSAMXG00000036947	ercc3	100	87.340	ENSPCIG00000011821	ERCC3	100	88.010	Phascolarctos_cinereus
ENSAMXG00000036947	ercc3	98	92.448	ENSPFOG00000015604	ercc3	100	91.826	Poecilia_formosa
ENSAMXG00000036947	ercc3	98	89.740	ENSPLAG00000022245	ercc3	100	93.065	Poecilia_latipinna
ENSAMXG00000036947	ercc3	98	92.448	ENSPMEG00000016987	ercc3	100	91.826	Poecilia_mexicana
ENSAMXG00000036947	ercc3	100	92.082	ENSPREG00000020921	ercc3	100	92.082	Poecilia_reticulata
ENSAMXG00000036947	ercc3	100	86.369	ENSPPYG00000012769	ERCC3	100	86.369	Pongo_abelii
ENSAMXG00000036947	ercc3	100	87.500	ENSPCOG00000024903	ERCC3	100	87.500	Propithecus_coquereli
ENSAMXG00000036947	ercc3	90	87.549	ENSPVAG00000013774	ERCC3	90	87.549	Pteropus_vampyrus
ENSAMXG00000036947	ercc3	100	92.848	ENSPNYG00000001208	ercc3	100	92.848	Pundamilia_nyererei
ENSAMXG00000036947	ercc3	100	95.013	ENSPNAG00000005748	ercc3	100	95.013	Pygocentrus_nattereri
ENSAMXG00000036947	ercc3	100	87.628	ENSRNOG00000013180	Ercc3	100	88.138	Rattus_norvegicus
ENSAMXG00000036947	ercc3	100	87.117	ENSRBIG00000027692	ERCC3	100	87.117	Rhinopithecus_bieti
ENSAMXG00000036947	ercc3	100	87.117	ENSRROG00000040673	ERCC3	100	87.117	Rhinopithecus_roxellana
ENSAMXG00000036947	ercc3	99	53.266	YIL143C	SSL2	85	55.962	Saccharomyces_cerevisiae
ENSAMXG00000036947	ercc3	100	86.862	ENSSBOG00000023079	ERCC3	100	86.862	Saimiri_boliviensis_boliviensis
ENSAMXG00000036947	ercc3	97	89.153	ENSSHAG00000007423	ERCC3	100	87.755	Sarcophilus_harrisii
ENSAMXG00000036947	ercc3	98	91.503	ENSSFOG00015012753	ercc3	100	90.421	Scleropages_formosus
ENSAMXG00000036947	ercc3	100	91.094	ENSSMAG00000011915	ercc3	100	91.094	Scophthalmus_maximus
ENSAMXG00000036947	ercc3	100	92.593	ENSSDUG00000021181	ercc3	100	92.593	Seriola_dumerili
ENSAMXG00000036947	ercc3	100	92.593	ENSSLDG00000008744	ercc3	98	92.593	Seriola_lalandi_dorsalis
ENSAMXG00000036947	ercc3	55	80.184	ENSSARG00000000751	-	85	80.184	Sorex_araneus
ENSAMXG00000036947	ercc3	90	88.244	ENSSPUG00000015183	ERCC3	91	88.244	Sphenodon_punctatus
ENSAMXG00000036947	ercc3	100	93.231	ENSSPAG00000004748	ercc3	100	93.231	Stegastes_partitus
ENSAMXG00000036947	ercc3	100	86.990	ENSSSCG00000015721	ERCC3	100	88.676	Sus_scrofa
ENSAMXG00000036947	ercc3	99	87.226	ENSTGUG00000004920	-	100	87.226	Taeniopygia_guttata
ENSAMXG00000036947	ercc3	100	90.026	ENSTRUG00000017185	ercc3	100	90.153	Takifugu_rubripes
ENSAMXG00000036947	ercc3	97	88.058	ENSTNIG00000005457	ercc3	99	88.609	Tetraodon_nigroviridis
ENSAMXG00000036947	ercc3	80	87.879	ENSTBEG00000009381	ERCC3	81	87.879	Tupaia_belangeri
ENSAMXG00000036947	ercc3	68	93.006	ENSUAMG00000009589	-	100	93.006	Ursus_americanus
ENSAMXG00000036947	ercc3	100	86.862	ENSUMAG00000008361	ERCC3	100	87.372	Ursus_maritimus
ENSAMXG00000036947	ercc3	92	89.167	ENSVVUG00000010431	ERCC3	100	89.167	Vulpes_vulpes
ENSAMXG00000036947	ercc3	100	86.785	ENSXETG00000033646	ercc3	100	86.785	Xenopus_tropicalis
ENSAMXG00000036947	ercc3	99	92.109	ENSXCOG00000001791	ercc3	99	92.109	Xiphophorus_couchianus
ENSAMXG00000036947	ercc3	100	92.082	ENSXMAG00000003641	ercc3	100	92.082	Xiphophorus_maculatus