EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000037104 (Gene tree)
Gene ID: 103047583
Gene Symbol: sub1b
Alias: rpo2tc1|sub1|zgc:92831
Full Name: SUB1 homolog%2C transcriptional regulator
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 13015 bases
Position: chrAPWO02000029.1:4567722-4580736
Accession: 103047583
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000044963	PC4	PF02229.16	1.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000043974	-	4692	XM_007250465	ENSAMXP00000044963	126 (aa)	XP_007250527	W5LJP2

Gene Model

Click here to download ENSAMXG00000037104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000037104's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000037104	sub1b	100	80.159	ENSAMXG00000038560	-	100	80.159

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000037104	sub1b	100	74.016	ENSG00000113387	SUB1	100	77.953	Homo_sapiens
ENSAMXG00000037104	sub1b	100	78.571	ENSAPOG00000005917	SUB1	100	80.952	Acanthochromis_polyacanthus
ENSAMXG00000037104	sub1b	100	73.228	ENSAMEG00000006238	SUB1	95	77.165	Ailuropoda_melanoleuca
ENSAMXG00000037104	sub1b	100	80.159	ENSACIG00000015976	sub1b	100	83.333	Amphilophus_citrinellus
ENSAMXG00000037104	sub1b	77	73.196	ENSAOCG00000002323	-	86	71.963	Amphiprion_ocellaris
ENSAMXG00000037104	sub1b	92	73.276	ENSAOCG00000007313	-	83	81.553	Amphiprion_ocellaris
ENSAMXG00000037104	sub1b	52	76.923	ENSAPEG00000014618	-	62	76.923	Amphiprion_percula
ENSAMXG00000037104	sub1b	87	66.964	ENSAPEG00000017151	-	76	75.758	Amphiprion_percula
ENSAMXG00000037104	sub1b	100	80.159	ENSAPEG00000024347	sub1b	100	83.333	Amphiprion_percula
ENSAMXG00000037104	sub1b	100	80.159	ENSATEG00000010340	sub1b	100	82.540	Anabas_testudineus
ENSAMXG00000037104	sub1b	100	65.672	ENSACAG00000007974	SUB1	100	68.657	Anolis_carolinensis
ENSAMXG00000037104	sub1b	100	70.866	ENSANAG00000023392	-	83	74.803	Aotus_nancymaae
ENSAMXG00000037104	sub1b	100	74.016	ENSANAG00000011651	-	100	77.953	Aotus_nancymaae
ENSAMXG00000037104	sub1b	100	80.159	ENSACLG00000016875	sub1b	64	83.333	Astatotilapia_calliptera
ENSAMXG00000037104	sub1b	100	74.016	ENSBTAG00000021965	SUB1	100	77.953	Bos_taurus
ENSAMXG00000037104	sub1b	51	47.692	WBGene00011743	T13F2.2	80	39.604	Caenorhabditis_elegans
ENSAMXG00000037104	sub1b	80	72.549	ENSCJAG00000018718	SUB1	98	77.451	Callithrix_jacchus
ENSAMXG00000037104	sub1b	100	70.635	ENSCAFG00000024488	-	100	70.635	Canis_familiaris
ENSAMXG00000037104	sub1b	100	73.228	ENSCAFG00000016713	-	96	77.165	Canis_familiaris
ENSAMXG00000037104	sub1b	100	73.228	ENSCAFG00000018879	-	88	77.165	Canis_familiaris
ENSAMXG00000037104	sub1b	100	73.228	ENSCAFG00020016840	-	100	77.165	Canis_lupus_dingo
ENSAMXG00000037104	sub1b	100	76.562	ENSCAFG00020011479	-	77	76.562	Canis_lupus_dingo
ENSAMXG00000037104	sub1b	100	74.016	ENSCHIG00000008460	SUB1	100	77.953	Capra_hircus
ENSAMXG00000037104	sub1b	100	67.692	ENSTSYG00000014069	-	93	71.538	Carlito_syrichta
ENSAMXG00000037104	sub1b	100	74.016	ENSTSYG00000029948	-	100	77.953	Carlito_syrichta
ENSAMXG00000037104	sub1b	100	66.142	ENSTSYG00000035366	-	83	70.079	Carlito_syrichta
ENSAMXG00000037104	sub1b	100	74.016	ENSCPOG00000031334	SUB1	100	77.953	Cavia_porcellus
ENSAMXG00000037104	sub1b	100	66.929	ENSCCAG00000017043	-	93	68.504	Cebus_capucinus
ENSAMXG00000037104	sub1b	100	71.654	ENSCCAG00000033751	-	95	75.591	Cebus_capucinus
ENSAMXG00000037104	sub1b	100	74.016	ENSCCAG00000023605	-	100	77.953	Cebus_capucinus
ENSAMXG00000037104	sub1b	100	70.866	ENSCCAG00000020604	-	100	71.654	Cebus_capucinus
ENSAMXG00000037104	sub1b	100	74.016	ENSCATG00000031199	SUB1	100	77.953	Cercocebus_atys
ENSAMXG00000037104	sub1b	100	71.875	ENSCLAG00000007522	SUB1	100	77.344	Chinchilla_lanigera
ENSAMXG00000037104	sub1b	100	70.866	ENSCSAG00000019449	-	100	74.016	Chlorocebus_sabaeus
ENSAMXG00000037104	sub1b	100	74.016	ENSCSAG00000017172	-	100	77.953	Chlorocebus_sabaeus
ENSAMXG00000037104	sub1b	100	73.228	ENSCPBG00000024218	SUB1	79	74.016	Chrysemys_picta_bellii
ENSAMXG00000037104	sub1b	100	74.016	ENSCANG00000029372	SUB1	100	77.953	Colobus_angolensis_palliatus
ENSAMXG00000037104	sub1b	100	59.055	ENSCANG00000028665	-	90	62.205	Colobus_angolensis_palliatus
ENSAMXG00000037104	sub1b	70	69.318	ENSCGRG00001016254	-	100	57.143	Cricetulus_griseus_chok1gshd
ENSAMXG00000037104	sub1b	100	60.630	ENSCGRG00001014660	-	100	61.417	Cricetulus_griseus_chok1gshd
ENSAMXG00000037104	sub1b	100	71.654	ENSCGRG00001003473	-	100	75.591	Cricetulus_griseus_chok1gshd
ENSAMXG00000037104	sub1b	100	71.654	ENSCGRG00000001133	-	100	75.591	Cricetulus_griseus_crigri
ENSAMXG00000037104	sub1b	100	60.630	ENSCGRG00000019368	-	100	61.417	Cricetulus_griseus_crigri
ENSAMXG00000037104	sub1b	100	59.843	ENSCGRG00000001489	-	100	63.780	Cricetulus_griseus_crigri
ENSAMXG00000037104	sub1b	99	84.800	ENSDARG00000007720	sub1b	99	83.200	Danio_rerio
ENSAMXG00000037104	sub1b	99	77.600	ENSDARG00000053446	sub1a	100	78.571	Danio_rerio
ENSAMXG00000037104	sub1b	100	71.654	ENSDNOG00000040794	-	100	75.591	Dasypus_novemcinctus
ENSAMXG00000037104	sub1b	100	70.866	ENSDNOG00000032396	-	100	74.803	Dasypus_novemcinctus
ENSAMXG00000037104	sub1b	100	71.654	ENSDORG00000013916	Sub1	100	75.591	Dipodomys_ordii
ENSAMXG00000037104	sub1b	100	74.016	ENSEASG00005007099	SUB1	100	77.953	Equus_asinus_asinus
ENSAMXG00000037104	sub1b	100	74.016	ENSECAG00000012399	SUB1	100	77.953	Equus_caballus
ENSAMXG00000037104	sub1b	81	81.373	ENSEEUG00000000436	SUB1	99	81.373	Erinaceus_europaeus
ENSAMXG00000037104	sub1b	100	73.228	ENSFCAG00000037288	SUB1	100	77.165	Felis_catus
ENSAMXG00000037104	sub1b	100	72.441	ENSFALG00000002143	SUB1	87	73.228	Ficedula_albicollis
ENSAMXG00000037104	sub1b	100	74.016	ENSFDAG00000017179	SUB1	100	77.953	Fukomys_damarensis
ENSAMXG00000037104	sub1b	100	46.825	ENSGALG00000027147	-	100	46.825	Gallus_gallus
ENSAMXG00000037104	sub1b	100	74.016	ENSGALG00000003248	SUB1	100	74.803	Gallus_gallus
ENSAMXG00000037104	sub1b	100	72.441	ENSGALG00000034905	-	100	73.228	Gallus_gallus
ENSAMXG00000037104	sub1b	100	82.540	ENSGACG00000003912	sub1b	100	82.540	Gasterosteus_aculeatus
ENSAMXG00000037104	sub1b	100	74.016	ENSGAGG00000013535	SUB1	100	74.803	Gopherus_agassizii
ENSAMXG00000037104	sub1b	100	74.016	ENSGGOG00000040900	SUB1	100	77.953	Gorilla_gorilla
ENSAMXG00000037104	sub1b	99	68.000	ENSHBUG00000013953	sub1b	77	81.731	Haplochromis_burtoni
ENSAMXG00000037104	sub1b	100	74.016	ENSHGLG00000006749	SUB1	100	77.953	Heterocephalus_glaber_female
ENSAMXG00000037104	sub1b	100	74.016	ENSHGLG00100014344	SUB1	100	77.953	Heterocephalus_glaber_male
ENSAMXG00000037104	sub1b	100	77.778	ENSHCOG00000001809	sub1b	100	77.778	Hippocampus_comes
ENSAMXG00000037104	sub1b	100	81.250	ENSIPUG00000024367	SUB1	100	81.250	Ictalurus_punctatus
ENSAMXG00000037104	sub1b	100	82.540	ENSIPUG00000008166	sub1	100	85.714	Ictalurus_punctatus
ENSAMXG00000037104	sub1b	100	74.803	ENSSTOG00000019364	SUB1	100	78.740	Ictidomys_tridecemlineatus
ENSAMXG00000037104	sub1b	100	69.291	ENSJJAG00000018885	Sub1	100	73.228	Jaculus_jaculus
ENSAMXG00000037104	sub1b	99	79.200	ENSLBEG00000010728	sub1b	100	81.746	Labrus_bergylta
ENSAMXG00000037104	sub1b	52	89.231	ENSLACG00000001068	SUB1	100	89.231	Latimeria_chalumnae
ENSAMXG00000037104	sub1b	100	75.397	ENSLOCG00000006692	sub1b	100	75.397	Lepisosteus_oculatus
ENSAMXG00000037104	sub1b	100	74.016	ENSLAFG00000032088	-	100	77.953	Loxodonta_africana
ENSAMXG00000037104	sub1b	100	74.016	ENSLAFG00000011006	-	100	77.953	Loxodonta_africana
ENSAMXG00000037104	sub1b	100	66.142	ENSMFAG00000045643	-	61	69.291	Macaca_fascicularis
ENSAMXG00000037104	sub1b	100	74.016	ENSMFAG00000040728	SUB1	100	77.953	Macaca_fascicularis
ENSAMXG00000037104	sub1b	100	74.016	ENSMMUG00000046181	SUB1	100	77.953	Macaca_mulatta
ENSAMXG00000037104	sub1b	100	74.016	ENSMNEG00000037046	SUB1	100	77.953	Macaca_nemestrina
ENSAMXG00000037104	sub1b	100	74.016	ENSMLEG00000037017	-	100	77.953	Mandrillus_leucophaeus
ENSAMXG00000037104	sub1b	100	58.268	ENSMLEG00000043436	-	90	61.417	Mandrillus_leucophaeus
ENSAMXG00000037104	sub1b	100	72.441	ENSMLEG00000030509	-	94	75.591	Mandrillus_leucophaeus
ENSAMXG00000037104	sub1b	100	78.571	ENSMAMG00000018428	sub1b	100	81.746	Mastacembelus_armatus
ENSAMXG00000037104	sub1b	100	80.159	ENSMZEG00005021252	sub1b	100	83.333	Maylandia_zebra
ENSAMXG00000037104	sub1b	53	64.179	ENSMGAG00000001200	-	50	64.179	Meleagris_gallopavo
ENSAMXG00000037104	sub1b	100	74.016	ENSMGAG00000002906	SUB1	100	74.803	Meleagris_gallopavo
ENSAMXG00000037104	sub1b	100	71.654	ENSMAUG00000020232	Sub1	100	75.591	Mesocricetus_auratus
ENSAMXG00000037104	sub1b	100	74.016	ENSMICG00000014535	SUB1	100	77.953	Microcebus_murinus
ENSAMXG00000037104	sub1b	100	70.866	ENSMOCG00000018930	-	100	74.803	Microtus_ochrogaster
ENSAMXG00000037104	sub1b	100	61.111	ENSMOCG00000016424	-	100	57.937	Microtus_ochrogaster
ENSAMXG00000037104	sub1b	83	78.095	ENSMODG00000020410	SUB1	75	77.143	Monodelphis_domestica
ENSAMXG00000037104	sub1b	100	79.365	ENSMALG00000007163	sub1b	81	82.540	Monopterus_albus
ENSAMXG00000037104	sub1b	100	71.654	MGP_CAROLIEiJ_G0019676	Sub1	100	75.591	Mus_caroli
ENSAMXG00000037104	sub1b	100	71.654	ENSMUSG00000022205	Sub1	100	75.591	Mus_musculus
ENSAMXG00000037104	sub1b	100	72.441	MGP_PahariEiJ_G0016056	Sub1	100	76.378	Mus_pahari
ENSAMXG00000037104	sub1b	100	71.654	MGP_SPRETEiJ_G0020573	Sub1	100	75.591	Mus_spretus
ENSAMXG00000037104	sub1b	100	72.441	ENSMPUG00000018418	-	100	76.378	Mustela_putorius_furo
ENSAMXG00000037104	sub1b	100	73.228	ENSMPUG00000015185	-	100	77.165	Mustela_putorius_furo
ENSAMXG00000037104	sub1b	100	71.654	ENSMLUG00000009236	-	95	72.441	Myotis_lucifugus
ENSAMXG00000037104	sub1b	100	74.016	ENSMLUG00000013685	-	95	77.953	Myotis_lucifugus
ENSAMXG00000037104	sub1b	100	66.929	ENSNGAG00000010782	-	84	72.441	Nannospalax_galili
ENSAMXG00000037104	sub1b	100	72.441	ENSNGAG00000014072	-	100	76.378	Nannospalax_galili
ENSAMXG00000037104	sub1b	100	64.286	ENSNGAG00000017212	-	100	63.492	Nannospalax_galili
ENSAMXG00000037104	sub1b	83	77.143	ENSNBRG00000008451	sub1b	84	81.731	Neolamprologus_brichardi
ENSAMXG00000037104	sub1b	100	66.142	ENSNLEG00000035968	-	100	72.441	Nomascus_leucogenys
ENSAMXG00000037104	sub1b	100	73.228	ENSNLEG00000018383	-	95	77.165	Nomascus_leucogenys
ENSAMXG00000037104	sub1b	100	73.228	ENSNLEG00000036068	SUB1	100	77.165	Nomascus_leucogenys
ENSAMXG00000037104	sub1b	100	73.228	ENSMEUG00000007770	SUB1	100	76.378	Notamacropus_eugenii
ENSAMXG00000037104	sub1b	100	72.441	ENSOPRG00000012887	SUB1	100	76.378	Ochotona_princeps
ENSAMXG00000037104	sub1b	100	70.079	ENSODEG00000014558	-	72	75.926	Octodon_degus
ENSAMXG00000037104	sub1b	86	75.926	ENSODEG00000015114	-	87	75.926	Octodon_degus
ENSAMXG00000037104	sub1b	100	74.016	ENSODEG00000001937	-	100	77.953	Octodon_degus
ENSAMXG00000037104	sub1b	100	74.016	ENSOANG00000002328	SUB1	95	77.165	Ornithorhynchus_anatinus
ENSAMXG00000037104	sub1b	100	71.654	ENSOCUG00000006262	SUB1	60	72.441	Oryctolagus_cuniculus
ENSAMXG00000037104	sub1b	100	74.016	ENSOGAG00000009012	-	100	77.953	Otolemur_garnettii
ENSAMXG00000037104	sub1b	98	74.194	ENSOGAG00000000337	-	100	78.226	Otolemur_garnettii
ENSAMXG00000037104	sub1b	100	74.016	ENSOARG00000012154	SUB1	100	77.953	Ovis_aries
ENSAMXG00000037104	sub1b	100	74.016	ENSPPAG00000011212	SUB1	100	77.953	Pan_paniscus
ENSAMXG00000037104	sub1b	100	73.228	ENSPPRG00000008557	SUB1	100	77.165	Panthera_pardus
ENSAMXG00000037104	sub1b	100	73.228	ENSPTIG00000009466	SUB1	100	77.165	Panthera_tigris_altaica
ENSAMXG00000037104	sub1b	100	74.016	ENSPTRG00000048895	SUB1	100	77.953	Pan_troglodytes
ENSAMXG00000037104	sub1b	100	68.504	ENSPTRG00000041644	-	100	72.441	Pan_troglodytes
ENSAMXG00000037104	sub1b	100	59.843	ENSPANG00000033272	-	90	59.843	Papio_anubis
ENSAMXG00000037104	sub1b	100	72.222	ENSPANG00000035601	-	100	74.603	Papio_anubis
ENSAMXG00000037104	sub1b	100	74.016	ENSPANG00000002644	-	95	77.953	Papio_anubis
ENSAMXG00000037104	sub1b	100	74.016	ENSPANG00000000339	-	97	77.953	Papio_anubis
ENSAMXG00000037104	sub1b	100	72.441	ENSPANG00000000672	-	91	75.591	Papio_anubis
ENSAMXG00000037104	sub1b	100	80.952	ENSPKIG00000016923	sub1b	100	80.159	Paramormyrops_kingsleyae
ENSAMXG00000037104	sub1b	100	74.016	ENSPSIG00000005731	SUB1	95	74.803	Pelodiscus_sinensis
ENSAMXG00000037104	sub1b	100	73.228	ENSPCIG00000020907	-	100	76.378	Phascolarctos_cinereus
ENSAMXG00000037104	sub1b	100	69.291	ENSPCIG00000020827	-	100	69.291	Phascolarctos_cinereus
ENSAMXG00000037104	sub1b	100	74.016	ENSPPYG00000015379	SUB1	100	77.953	Pongo_abelii
ENSAMXG00000037104	sub1b	100	70.866	ENSPPYG00000018347	-	100	74.803	Pongo_abelii
ENSAMXG00000037104	sub1b	100	74.016	ENSPCOG00000014391	SUB1	100	77.953	Propithecus_coquereli
ENSAMXG00000037104	sub1b	100	73.228	ENSPVAG00000004785	SUB1	100	77.165	Pteropus_vampyrus
ENSAMXG00000037104	sub1b	100	80.159	ENSPNYG00000010975	sub1b	100	83.333	Pundamilia_nyererei
ENSAMXG00000037104	sub1b	99	90.400	ENSPNAG00000005998	sub1b	100	89.683	Pygocentrus_nattereri
ENSAMXG00000037104	sub1b	100	78.571	ENSPNAG00000008693	sub1a	100	78.571	Pygocentrus_nattereri
ENSAMXG00000037104	sub1b	100	70.866	ENSRNOG00000050563	Sub1	100	74.803	Rattus_norvegicus
ENSAMXG00000037104	sub1b	100	73.810	ENSRBIG00000031233	SUB1	100	73.810	Rhinopithecus_bieti
ENSAMXG00000037104	sub1b	100	74.016	ENSRROG00000040438	SUB1	100	77.953	Rhinopithecus_roxellana
ENSAMXG00000037104	sub1b	100	63.780	ENSRROG00000042718	-	90	67.717	Rhinopithecus_roxellana
ENSAMXG00000037104	sub1b	100	74.016	ENSSBOG00000026994	SUB1	100	77.953	Saimiri_boliviensis_boliviensis
ENSAMXG00000037104	sub1b	100	73.228	ENSSHAG00000014986	SUB1	100	76.378	Sarcophilus_harrisii
ENSAMXG00000037104	sub1b	100	74.803	ENSSFOG00015018386	sub1b	100	75.591	Scleropages_formosus
ENSAMXG00000037104	sub1b	100	75.397	ENSSFOG00015017283	sub1b	100	75.397	Scleropages_formosus
ENSAMXG00000037104	sub1b	100	80.159	ENSSMAG00000000313	sub1b	100	80.159	Scophthalmus_maximus
ENSAMXG00000037104	sub1b	100	83.333	ENSSDUG00000013854	sub1b	76	83.333	Seriola_dumerili
ENSAMXG00000037104	sub1b	100	83.333	ENSSLDG00000000852	sub1b	100	83.333	Seriola_lalandi_dorsalis
ENSAMXG00000037104	sub1b	100	72.441	ENSSPUG00000016817	SUB1	100	73.228	Sphenodon_punctatus
ENSAMXG00000037104	sub1b	100	83.333	ENSSPAG00000019363	sub1b	100	83.333	Stegastes_partitus
ENSAMXG00000037104	sub1b	100	74.016	ENSSSCG00000040294	-	87	77.953	Sus_scrofa
ENSAMXG00000037104	sub1b	100	74.016	ENSSSCG00000032650	-	100	77.953	Sus_scrofa
ENSAMXG00000037104	sub1b	100	71.654	ENSTGUG00000001918	SUB1	100	72.441	Taeniopygia_guttata
ENSAMXG00000037104	sub1b	100	75.397	ENSTRUG00000024420	sub1b	100	78.571	Takifugu_rubripes
ENSAMXG00000037104	sub1b	100	73.810	ENSTNIG00000002700	sub1b	100	76.984	Tetraodon_nigroviridis
ENSAMXG00000037104	sub1b	100	74.016	ENSTBEG00000012861	-	100	74.016	Tupaia_belangeri
ENSAMXG00000037104	sub1b	100	73.228	ENSTBEG00000011247	-	84	74.074	Tupaia_belangeri
ENSAMXG00000037104	sub1b	100	73.228	ENSTBEG00000001790	-	100	72.441	Tupaia_belangeri
ENSAMXG00000037104	sub1b	100	73.228	ENSTBEG00000006504	-	100	77.165	Tupaia_belangeri
ENSAMXG00000037104	sub1b	99	69.841	ENSTBEG00000015821	-	100	73.810	Tupaia_belangeri
ENSAMXG00000037104	sub1b	100	73.228	ENSTBEG00000004053	-	100	77.165	Tupaia_belangeri
ENSAMXG00000037104	sub1b	81	80.392	ENSTTRG00000017324	SUB1	99	80.392	Tursiops_truncatus
ENSAMXG00000037104	sub1b	100	73.228	ENSUAMG00000000182	SUB1	100	77.165	Ursus_americanus
ENSAMXG00000037104	sub1b	100	73.228	ENSUMAG00000013792	SUB1	100	77.165	Ursus_maritimus
ENSAMXG00000037104	sub1b	100	68.504	ENSVPAG00000011012	SUB1	100	72.441	Vicugna_pacos
ENSAMXG00000037104	sub1b	100	73.228	ENSVVUG00000022166	-	100	77.165	Vulpes_vulpes
ENSAMXG00000037104	sub1b	87	69.091	ENSVVUG00000025193	-	95	71.681	Vulpes_vulpes
ENSAMXG00000037104	sub1b	100	72.093	ENSXETG00000027218	sub1	100	75.969	Xenopus_tropicalis