EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000037218 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 3003 bases
Position: chr23:24916978-24919980
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000040603	RVT_1	PF00078.27	5.3e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000040306	-	3003	-	ENSAMXP00000040603	1000 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000037218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000037218's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000037218	-	98	32.698	ENSAMXG00000037256	-	78	32.698
ENSAMXG00000037218	-	76	35.149	ENSAMXG00000036080	-	67	35.149
ENSAMXG00000037218	-	96	31.902	ENSAMXG00000036146	-	76	31.902
ENSAMXG00000037218	-	63	36.480	ENSAMXG00000042337	-	70	36.480
ENSAMXG00000037218	-	99	46.446	ENSAMXG00000034221	-	79	46.446
ENSAMXG00000037218	-	80	35.847	ENSAMXG00000036752	-	98	35.847
ENSAMXG00000037218	-	60	37.645	ENSAMXG00000040121	-	70	37.645
ENSAMXG00000037218	-	84	33.569	ENSAMXG00000041150	-	80	33.569
ENSAMXG00000037218	-	99	53.200	ENSAMXG00000031230	-	78	53.200
ENSAMXG00000037218	-	99	34.118	ENSAMXG00000042761	-	79	34.118
ENSAMXG00000037218	-	81	47.613	ENSAMXG00000033587	-	98	47.613

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000037218	-	98	32.435	ENSAOCG00000008973	-	68	32.435	Amphiprion_ocellaris
ENSAMXG00000037218	-	99	38.386	ENSAPEG00000012642	-	79	38.386	Amphiprion_percula
ENSAMXG00000037218	-	98	30.030	ENSACLG00000002748	-	82	30.030	Astatotilapia_calliptera
ENSAMXG00000037218	-	81	47.246	ENSACLG00000027045	-	97	47.246	Astatotilapia_calliptera
ENSAMXG00000037218	-	85	31.345	ENSACLG00000018177	-	75	31.345	Astatotilapia_calliptera
ENSAMXG00000037218	-	99	32.306	ENSACLG00000014673	-	78	32.051	Astatotilapia_calliptera
ENSAMXG00000037218	-	99	43.539	ENSACLG00000012298	-	79	43.539	Astatotilapia_calliptera
ENSAMXG00000037218	-	99	45.862	ENSACLG00000023850	-	79	45.862	Astatotilapia_calliptera
ENSAMXG00000037218	-	82	48.492	ENSACLG00000026023	-	77	48.492	Astatotilapia_calliptera
ENSAMXG00000037218	-	99	43.400	ENSKMAG00000018279	-	79	43.400	Kryptolebias_marmoratus
ENSAMXG00000037218	-	99	44.679	ENSKMAG00000020345	-	79	44.679	Kryptolebias_marmoratus
ENSAMXG00000037218	-	97	31.129	ENSKMAG00000002601	-	79	31.129	Kryptolebias_marmoratus
ENSAMXG00000037218	-	99	47.082	ENSKMAG00000014428	-	79	47.082	Kryptolebias_marmoratus
ENSAMXG00000037218	-	98	31.288	ENSKMAG00000007098	-	77	31.288	Kryptolebias_marmoratus
ENSAMXG00000037218	-	99	38.630	ENSKMAG00000006598	-	86	38.729	Kryptolebias_marmoratus
ENSAMXG00000037218	-	99	30.924	ENSKMAG00000013004	-	78	30.924	Kryptolebias_marmoratus
ENSAMXG00000037218	-	96	30.793	ENSKMAG00000006893	-	97	30.793	Kryptolebias_marmoratus
ENSAMXG00000037218	-	74	31.200	ENSLBEG00000017877	-	94	31.200	Labrus_bergylta
ENSAMXG00000037218	-	74	34.221	ENSMZEG00005013632	-	98	34.354	Maylandia_zebra
ENSAMXG00000037218	-	98	43.616	ENSMZEG00005001544	-	97	43.616	Maylandia_zebra
ENSAMXG00000037218	-	67	60.089	ENSONIG00000020880	-	99	60.089	Oreochromis_niloticus
ENSAMXG00000037218	-	89	59.596	ENSONIG00000020778	-	97	59.596	Oreochromis_niloticus
ENSAMXG00000037218	-	98	32.996	ENSORLG00000029798	-	78	32.996	Oryzias_latipes
ENSAMXG00000037218	-	98	33.198	ENSORLG00000026691	-	78	33.198	Oryzias_latipes
ENSAMXG00000037218	-	99	44.890	ENSORLG00000024310	-	79	44.890	Oryzias_latipes
ENSAMXG00000037218	-	98	33.198	ENSORLG00000025420	-	78	33.198	Oryzias_latipes
ENSAMXG00000037218	-	76	32.692	ENSORLG00000023193	-	91	32.776	Oryzias_latipes
ENSAMXG00000037218	-	99	45.255	ENSORLG00000029419	-	79	45.255	Oryzias_latipes
ENSAMXG00000037218	-	99	51.555	ENSORLG00020000561	-	79	51.555	Oryzias_latipes_hni
ENSAMXG00000037218	-	99	30.448	ENSORLG00020001169	-	78	30.448	Oryzias_latipes_hni
ENSAMXG00000037218	-	76	48.289	ENSORLG00020003581	-	93	48.289	Oryzias_latipes_hni
ENSAMXG00000037218	-	99	31.773	ENSORLG00020008142	-	79	31.773	Oryzias_latipes_hni
ENSAMXG00000037218	-	87	51.831	ENSORLG00020016539	-	98	51.831	Oryzias_latipes_hni
ENSAMXG00000037218	-	98	33.097	ENSORLG00020020951	-	78	33.097	Oryzias_latipes_hni
ENSAMXG00000037218	-	99	32.870	ENSORLG00015002129	-	78	32.870	Oryzias_latipes_hsok
ENSAMXG00000037218	-	99	48.597	ENSORLG00015002592	-	77	48.700	Oryzias_latipes_hsok
ENSAMXG00000037218	-	99	51.454	ENSORLG00015013713	-	79	51.454	Oryzias_latipes_hsok
ENSAMXG00000037218	-	77	44.872	ENSOMEG00000006131	-	98	44.872	Oryzias_melastigma
ENSAMXG00000037218	-	97	31.521	ENSOMEG00000021560	-	94	31.521	Oryzias_melastigma
ENSAMXG00000037218	-	67	32.143	ENSPFOG00000021895	-	69	32.143	Poecilia_formosa
ENSAMXG00000037218	-	99	39.623	ENSPREG00000018911	-	78	39.623	Poecilia_reticulata
ENSAMXG00000037218	-	99	45.116	ENSPREG00000005522	-	80	45.116	Poecilia_reticulata
ENSAMXG00000037218	-	92	37.134	ENSSLDG00000010601	-	86	37.134	Seriola_lalandi_dorsalis
ENSAMXG00000037218	-	90	41.279	ENSXETG00000034016	-	89	41.279	Xenopus_tropicalis
ENSAMXG00000037218	-	84	45.390	ENSXMAG00000024492	-	98	45.390	Xiphophorus_maculatus
ENSAMXG00000037218	-	80	31.566	ENSXMAG00000023805	-	96	31.566	Xiphophorus_maculatus
ENSAMXG00000037218	-	99	31.695	ENSXMAG00000027070	-	77	31.695	Xiphophorus_maculatus
ENSAMXG00000037218	-	82	45.676	ENSXMAG00000021762	-	94	45.676	Xiphophorus_maculatus
ENSAMXG00000037218	-	99	47.295	ENSXMAG00000028274	-	83	47.295	Xiphophorus_maculatus
ENSAMXG00000037218	-	96	32.990	ENSXMAG00000027558	-	77	32.990	Xiphophorus_maculatus