EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMXG00000037246 (Gene tree)
Gene ID
103035888
Gene Symbol
rbfox3a
Alias
rbfox3
Full Name
RNA binding fox-1 homolog 3
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Plus strand
Length
697740 bases
Position
chr4:7583607-8281346
Accession
103035888
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000036153Fox-1_CPF12414.82.1e-4511
ENSAMXP00000054768Fox-1_CPF12414.82.1e-4511
ENSAMXP00000046388Fox-1_CPF12414.82.3e-4511
ENSAMXP00000032287Fox-1_CPF12414.82.4e-4511
ENSAMXP00000028047Fox-1_CPF12414.82.6e-4511
ENSAMXP00000050408Fox-1_CPF12414.82.7e-4511
ENSAMXP00000036153RRM_1PF00076.222e-1811
ENSAMXP00000054768RRM_1PF00076.222.2e-1811
ENSAMXP00000028047RRM_1PF00076.222.3e-1811
ENSAMXP00000050408RRM_1PF00076.222.4e-1811
ENSAMXP00000046388RRM_1PF00076.222.5e-1811
ENSAMXP00000032287RRM_1PF00076.220.000311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000031048-2021-ENSAMXP00000032287344 (aa)--
ENSAMXT00000031880-1068XM_022669040ENSAMXP00000054768355 (aa)XP_022524761-
ENSAMXT00000039513-996XM_015601928ENSAMXP00000036153331 (aa)XP_015457414-
ENSAMXT00000030885-2093-ENSAMXP00000028047368 (aa)--
ENSAMXT00000043877-2031XM_022669037ENSAMXP00000046388380 (aa)XP_022524758-
ENSAMXT00000036050-2114XM_015601925ENSAMXP00000050408375 (aa)XP_015457411-
Gene Model
Click here to download ENSAMXG00000037246's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000037246's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMXG00000037246rbfox3a9879.331ENSAMXG00000042841rbfox3b10076.111
ENSAMXG00000037246rbfox3a8658.199ENSAMXG00000011451rbfox28257.237
ENSAMXG00000037246rbfox3a8264.769ENSAMXG00000010470rbfox1l7461.972
ENSAMXG00000037246rbfox3a6770.614ENSAMXG00000002431rbfox16669.362
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000037246rbfox3a9083.168ENSG00000167281RBFOX39286.777Homo_sapiens
ENSAMXG00000037246rbfox3a10071.968ENSAPOG00000015658-9271.505Acanthochromis_polyacanthus
ENSAMXG00000037246rbfox3a10085.215ENSAPOG00000021630rbfox3b10083.333Acanthochromis_polyacanthus
ENSAMXG00000037246rbfox3a9879.310ENSAMEG00000014170RBFOX38876.571Ailuropoda_melanoleuca
ENSAMXG00000037246rbfox3a9581.761ENSACIG00000010817rbfox3b9579.672Amphilophus_citrinellus
ENSAMXG00000037246rbfox3a9473.030ENSACIG00000003768-7976.573Amphilophus_citrinellus
ENSAMXG00000037246rbfox3a10085.215ENSAOCG00000012358rbfox3b10083.554Amphiprion_ocellaris
ENSAMXG00000037246rbfox3a10082.527ENSAOCG00000010786-9882.667Amphiprion_ocellaris
ENSAMXG00000037246rbfox3a10075.910ENSAPEG00000015891-8975.824Amphiprion_percula
ENSAMXG00000037246rbfox3a10076.882ENSAPEG00000019081rbfox3b10075.467Amphiprion_percula
ENSAMXG00000037246rbfox3a9080.198ENSATEG00000023101-9380.195Anabas_testudineus
ENSAMXG00000037246rbfox3a9576.149ENSATEG00000019945rbfox3b9676.716Anabas_testudineus
ENSAMXG00000037246rbfox3a9882.477ENSACAG00000016093RBFOX310079.781Anolis_carolinensis
ENSAMXG00000037246rbfox3a9082.838ENSANAG00000023457RBFOX39580.528Aotus_nancymaae
ENSAMXG00000037246rbfox3a10083.871ENSACLG00000025552-10083.602Astatotilapia_calliptera
ENSAMXG00000037246rbfox3a10084.677ENSACLG00000020011rbfox3b9782.895Astatotilapia_calliptera
ENSAMXG00000037246rbfox3a7681.323ENSBTAG00000006280RBFOX39567.398Bos_taurus
ENSAMXG00000037246rbfox3a9073.267ENSCJAG00000009563RBFOX39669.429Callithrix_jacchus
ENSAMXG00000037246rbfox3a7391.322ENSCAFG00000005547RBFOX38886.747Canis_familiaris
ENSAMXG00000037246rbfox3a9070.857ENSCAFG00020008126RBFOX39369.688Canis_lupus_dingo
ENSAMXG00000037246rbfox3a9070.571ENSCHIG00000009124RBFOX39369.688Capra_hircus
ENSAMXG00000037246rbfox3a9071.714ENSTSYG00000029617RBFOX39672.571Carlito_syrichta
ENSAMXG00000037246rbfox3a9070.739ENSCPOG00000021703RBFOX39670.455Cavia_porcellus
ENSAMXG00000037246rbfox3a9082.838ENSCCAG00000028450RBFOX39580.528Cebus_capucinus
ENSAMXG00000037246rbfox3a9083.168ENSCATG00000018349RBFOX39580.858Cercocebus_atys
ENSAMXG00000037246rbfox3a9071.429ENSCLAG00000006449RBFOX39672.286Chinchilla_lanigera
ENSAMXG00000037246rbfox3a9083.168ENSCSAG00000002355RBFOX39580.858Chlorocebus_sabaeus
ENSAMXG00000037246rbfox3a10080.597ENSCPBG00000010904RBFOX310079.701Chrysemys_picta_bellii
ENSAMXG00000037246rbfox3a9083.168ENSCANG00000043120RBFOX39580.858Colobus_angolensis_palliatus
ENSAMXG00000037246rbfox3a9069.516ENSCGRG00001019476Rbfox39670.370Cricetulus_griseus_chok1gshd
ENSAMXG00000037246rbfox3a9069.516ENSCGRG00000003268Rbfox39670.370Cricetulus_griseus_crigri
ENSAMXG00000037246rbfox3a10068.717ENSCSEG00000020606RBFOX310067.112Cynoglossus_semilaevis
ENSAMXG00000037246rbfox3a10082.796ENSCSEG00000015567RBFOX39883.871Cynoglossus_semilaevis
ENSAMXG00000037246rbfox3a9885.714ENSCVAG00000006882rbfox3b10083.554Cyprinodon_variegatus
ENSAMXG00000037246rbfox3a9573.968ENSDARG00000074310rbfox3b9787.692Danio_rerio
ENSAMXG00000037246rbfox3a10097.011ENSDARG00000010083rbfox3a10097.855Danio_rerio
ENSAMXG00000037246rbfox3a7871.242ENSDNOG00000039391RBFOX36593.443Dasypus_novemcinctus
ENSAMXG00000037246rbfox3a9061.891ENSDORG00000005352Rbfox39360.511Dipodomys_ordii
ENSAMXG00000037246rbfox3a8458.419ENSEBUG00000013559RBFOX37161.154Eptatretus_burgeri
ENSAMXG00000037246rbfox3a9966.476ENSEBUG00000002129RBFOX39667.341Eptatretus_burgeri
ENSAMXG00000037246rbfox3a9081.250ENSEASG00005005059RBFOX39581.250Equus_asinus_asinus
ENSAMXG00000037246rbfox3a9081.250ENSECAG00000023811RBFOX39581.250Equus_caballus
ENSAMXG00000037246rbfox3a7984.507ENSEEUG00000013974RBFOX36893.443Erinaceus_europaeus
ENSAMXG00000037246rbfox3a5867.016ENSELUG00000009807-5069.540Esox_lucius
ENSAMXG00000037246rbfox3a10083.871ENSELUG00000017963rbfox3b10081.432Esox_lucius
ENSAMXG00000037246rbfox3a9882.727ENSFCAG00000002555RBFOX310079.178Felis_catus
ENSAMXG00000037246rbfox3a9867.590ENSFALG00000012288RBFOX38967.663Ficedula_albicollis
ENSAMXG00000037246rbfox3a9065.625ENSFDAG00000007489RBFOX39668.862Fukomys_damarensis
ENSAMXG00000037246rbfox3a9576.730ENSFHEG00000008550rbfox3b9582.657Fundulus_heteroclitus
ENSAMXG00000037246rbfox3a9566.575ENSGMOG00000019304-9569.279Gadus_morhua
ENSAMXG00000037246rbfox3a9883.587ENSGALG00000032889RBFOX310080.495Gallus_gallus
ENSAMXG00000037246rbfox3a10079.032ENSGAFG00000005025rbfox3b10078.249Gambusia_affinis
ENSAMXG00000037246rbfox3a9073.219ENSGACG00000002138-9373.164Gasterosteus_aculeatus
ENSAMXG00000037246rbfox3a10080.597ENSGAGG00000020025RBFOX39779.019Gopherus_agassizii
ENSAMXG00000037246rbfox3a9083.168ENSGGOG00000012546RBFOX39580.858Gorilla_gorilla
ENSAMXG00000037246rbfox3a9883.891ENSHBUG00000023098-9682.596Haplochromis_burtoni
ENSAMXG00000037246rbfox3a10084.677ENSHBUG00000018099rbfox3b10083.024Haplochromis_burtoni
ENSAMXG00000037246rbfox3a9070.621ENSHGLG00000008679RBFOX39670.056Heterocephalus_glaber_female
ENSAMXG00000037246rbfox3a9066.384ENSHGLG00100014739RBFOX39367.227Heterocephalus_glaber_male
ENSAMXG00000037246rbfox3a9873.138ENSHCOG00000007444RBFOX39573.670Hippocampus_comes
ENSAMXG00000037246rbfox3a9075.828ENSHCOG00000001863RBFOX38974.267Hippocampus_comes
ENSAMXG00000037246rbfox3a9566.857ENSIPUG00000021966rbfox3b10077.372Ictalurus_punctatus
ENSAMXG00000037246rbfox3a10095.770ENSIPUG00000012010rbfox3a10095.770Ictalurus_punctatus
ENSAMXG00000037246rbfox3a9067.101ENSSTOG00000026817RBFOX39571.528Ictidomys_tridecemlineatus
ENSAMXG00000037246rbfox3a9070.286ENSJJAG00000014167Rbfox39670.000Jaculus_jaculus
ENSAMXG00000037246rbfox3a10084.946ENSKMAG00000006726rbfox3b10083.554Kryptolebias_marmoratus
ENSAMXG00000037246rbfox3a10085.215ENSLBEG00000004030rbfox3b10083.333Labrus_bergylta
ENSAMXG00000037246rbfox3a10086.908ENSLBEG00000022508-10086.559Labrus_bergylta
ENSAMXG00000037246rbfox3a9873.109ENSLACG00000018409-9172.853Latimeria_chalumnae
ENSAMXG00000037246rbfox3a10091.940ENSLOCG00000012267rbfox3a10091.940Lepisosteus_oculatus
ENSAMXG00000037246rbfox3a9877.654ENSLAFG00000016623RBFOX39176.374Loxodonta_africana
ENSAMXG00000037246rbfox3a9070.857ENSMFAG00000002247RBFOX39669.714Macaca_fascicularis
ENSAMXG00000037246rbfox3a9083.168ENSMMUG00000023028RBFOX39580.858Macaca_mulatta
ENSAMXG00000037246rbfox3a9082.838ENSMNEG00000041147RBFOX39580.528Macaca_nemestrina
ENSAMXG00000037246rbfox3a9083.168ENSMLEG00000025686RBFOX39580.858Mandrillus_leucophaeus
ENSAMXG00000037246rbfox3a9881.763ENSMAMG00000020600-9479.290Mastacembelus_armatus
ENSAMXG00000037246rbfox3a9578.616ENSMAMG00000019810rbfox3b9576.066Mastacembelus_armatus
ENSAMXG00000037246rbfox3a9164.565ENSMZEG00005003055-5390.984Maylandia_zebra
ENSAMXG00000037246rbfox3a10084.946ENSMZEG00005000781rbfox3b10082.796Maylandia_zebra
ENSAMXG00000037246rbfox3a6678.027ENSMGAG00000005600RBFOX38378.475Meleagris_gallopavo
ENSAMXG00000037246rbfox3a9070.571ENSMAUG00000013543Rbfox39671.429Mesocricetus_auratus
ENSAMXG00000037246rbfox3a9980.723ENSMICG00000014898RBFOX39680.858Microcebus_murinus
ENSAMXG00000037246rbfox3a9071.429ENSMOCG00000015373Rbfox39672.000Microtus_ochrogaster
ENSAMXG00000037246rbfox3a9883.686ENSMMOG00000020193rbfox3b10082.586Mola_mola
ENSAMXG00000037246rbfox3a9882.371ENSMODG00000002089RBFOX310078.846Monodelphis_domestica
ENSAMXG00000037246rbfox3a10083.871ENSMALG00000020407rbfox3b10082.759Monopterus_albus
ENSAMXG00000037246rbfox3a10086.290ENSMALG00000018270-10086.290Monopterus_albus
ENSAMXG00000037246rbfox3a9083.168MGP_CAROLIEiJ_G0017487Rbfox39691.367Mus_caroli
ENSAMXG00000037246rbfox3a9083.168ENSMUSG00000025576Rbfox39691.367Mus_musculus
ENSAMXG00000037246rbfox3a9080.921MGP_PahariEiJ_G0018614Rbfox39692.086Mus_pahari
ENSAMXG00000037246rbfox3a9083.498MGP_SPRETEiJ_G0018331Rbfox39691.367Mus_spretus
ENSAMXG00000037246rbfox3a9875.204ENSMPUG00000012319RBFOX39672.460Mustela_putorius_furo
ENSAMXG00000037246rbfox3a9071.714ENSNGAG00000018006Rbfox39672.571Nannospalax_galili
ENSAMXG00000037246rbfox3a9877.273ENSNBRG00000022885-9273.824Neolamprologus_brichardi
ENSAMXG00000037246rbfox3a9884.195ENSNBRG00000010102rbfox3b10083.024Neolamprologus_brichardi
ENSAMXG00000037246rbfox3a9554.658ENSNLEG00000000153-9359.028Nomascus_leucogenys
ENSAMXG00000037246rbfox3a7987.500ENSMEUG00000004218-7589.655Notamacropus_eugenii
ENSAMXG00000037246rbfox3a7686.885ENSOPRG00000016279-7186.885Ochotona_princeps
ENSAMXG00000037246rbfox3a9083.498ENSODEG00000009433RBFOX39583.498Octodon_degus
ENSAMXG00000037246rbfox3a9885.714ENSONIG00000009549rbfox3b10083.554Oreochromis_niloticus
ENSAMXG00000037246rbfox3a9883.636ENSONIG00000007282-9882.006Oreochromis_niloticus
ENSAMXG00000037246rbfox3a10084.946ENSORLG00000000905rbfox3b7982.796Oryzias_latipes
ENSAMXG00000037246rbfox3a10084.946ENSORLG00020018030rbfox3b9982.796Oryzias_latipes_hni
ENSAMXG00000037246rbfox3a10084.677ENSORLG00015009200rbfox3b10083.024Oryzias_latipes_hsok
ENSAMXG00000037246rbfox3a8079.299ENSOMEG00000014677rbfox3b8679.464Oryzias_melastigma
ENSAMXG00000037246rbfox3a9882.979ENSOGAG00000029595RBFOX38780.180Otolemur_garnettii
ENSAMXG00000037246rbfox3a9761.960ENSOARG00000002908RBFOX38960.632Ovis_aries
ENSAMXG00000037246rbfox3a7681.712ENSPPAG00000025383RBFOX38881.712Pan_paniscus
ENSAMXG00000037246rbfox3a9070.930ENSPPRG00000007819RBFOX39670.640Panthera_pardus
ENSAMXG00000037246rbfox3a9083.168ENSPTRG00000009727RBFOX39580.858Pan_troglodytes
ENSAMXG00000037246rbfox3a9083.168ENSPANG00000019837RBFOX39580.858Papio_anubis
ENSAMXG00000037246rbfox3a9868.693ENSPKIG00000022633-9763.288Paramormyrops_kingsleyae
ENSAMXG00000037246rbfox3a9991.842ENSPKIG00000010299rbfox3a9790.407Paramormyrops_kingsleyae
ENSAMXG00000037246rbfox3a8780.793ENSPMGG00000008000rbfox3b10082.012Periophthalmus_magnuspinnatus
ENSAMXG00000037246rbfox3a9071.714ENSPEMG00000010500Rbfox39672.286Peromyscus_maniculatus_bairdii
ENSAMXG00000037246rbfox3a5376.842ENSPMAG00000008689rbfox3b9478.756Petromyzon_marinus
ENSAMXG00000037246rbfox3a9871.011ENSPCIG00000005766RBFOX39578.229Phascolarctos_cinereus
ENSAMXG00000037246rbfox3a9985.000ENSPFOG00000018294rbfox3b9783.421Poecilia_formosa
ENSAMXG00000037246rbfox3a7486.939ENSPLAG00000000481rbfox3b7683.871Poecilia_latipinna
ENSAMXG00000037246rbfox3a9576.730ENSPMEG00000022997rbfox3b9582.657Poecilia_mexicana
ENSAMXG00000037246rbfox3a10085.753ENSPREG00000012886rbfox3b10083.684Poecilia_reticulata
ENSAMXG00000037246rbfox3a8475.265ENSPPYG00000008704RBFOX38280.000Pongo_abelii
ENSAMXG00000037246rbfox3a9369.014ENSPCAG00000001401RBFOX39671.633Procavia_capensis
ENSAMXG00000037246rbfox3a9571.038ENSPCOG00000012689RBFOX39770.000Propithecus_coquereli
ENSAMXG00000037246rbfox3a9060.286ENSPVAG00000015243RBFOX39662.571Pteropus_vampyrus
ENSAMXG00000037246rbfox3a10074.731ENSPNYG00000010414rbfox3b10074.400Pundamilia_nyererei
ENSAMXG00000037246rbfox3a10078.763ENSPNYG00000009079-9776.533Pundamilia_nyererei
ENSAMXG00000037246rbfox3a10099.728ENSPNAG00000002889rbfox3a10099.732Pygocentrus_nattereri
ENSAMXG00000037246rbfox3a9565.723ENSPNAG00000018173rbfox3b8770.652Pygocentrus_nattereri
ENSAMXG00000037246rbfox3a9080.921ENSRNOG00000003386Rbfox39580.921Rattus_norvegicus
ENSAMXG00000037246rbfox3a9882.979ENSRBIG00000040449RBFOX310079.178Rhinopithecus_bieti
ENSAMXG00000037246rbfox3a9083.168ENSRROG00000000766RBFOX39580.858Rhinopithecus_roxellana
ENSAMXG00000037246rbfox3a9082.838ENSSBOG00000031591RBFOX39580.528Saimiri_boliviensis_boliviensis
ENSAMXG00000037246rbfox3a9874.515ENSSHAG00000016076RBFOX39578.229Sarcophilus_harrisii
ENSAMXG00000037246rbfox3a9991.316ENSSFOG00015023260rbfox3a10091.512Scleropages_formosus
ENSAMXG00000037246rbfox3a9871.343ENSSFOG00015004716RBFOX310069.730Scleropages_formosus
ENSAMXG00000037246rbfox3a10082.796ENSSMAG00000019052-10082.527Scophthalmus_maximus
ENSAMXG00000037246rbfox3a9882.319ENSSMAG00000012618rbfox3b8780.662Scophthalmus_maximus
ENSAMXG00000037246rbfox3a9576.730ENSSDUG00000023183rbfox3b9582.657Seriola_dumerili
ENSAMXG00000037246rbfox3a10079.301ENSSDUG00000015801-10078.628Seriola_dumerili
ENSAMXG00000037246rbfox3a10085.215ENSSLDG00000000149rbfox3b10083.554Seriola_lalandi_dorsalis
ENSAMXG00000037246rbfox3a10082.527ENSSLDG00000016098-10082.058Seriola_lalandi_dorsalis
ENSAMXG00000037246rbfox3a9679.641ENSSPUG00000011733RBFOX310078.743Sphenodon_punctatus
ENSAMXG00000037246rbfox3a10077.151ENSSPAG00000017571rbfox3b10075.467Stegastes_partitus
ENSAMXG00000037246rbfox3a8279.273ENSSPAG00000004898-7578.906Stegastes_partitus
ENSAMXG00000037246rbfox3a8287.868ENSSSCG00000039498RBFOX39774.845Sus_scrofa
ENSAMXG00000037246rbfox3a9880.952ENSTRUG00000004894rbfox3b9480.531Takifugu_rubripes
ENSAMXG00000037246rbfox3a9976.230ENSTNIG00000011278rbfox3b9174.124Tetraodon_nigroviridis
ENSAMXG00000037246rbfox3a5761.017ENSTBEG00000004296-5961.751Tupaia_belangeri
ENSAMXG00000037246rbfox3a9064.571ENSTTRG00000003676RBFOX39663.714Tursiops_truncatus
ENSAMXG00000037246rbfox3a9083.498ENSUAMG00000004668RBFOX39581.188Ursus_americanus
ENSAMXG00000037246rbfox3a9878.698ENSVVUG00000017864RBFOX39580.528Vulpes_vulpes
ENSAMXG00000037246rbfox3a9864.873ENSXETG00000020236rbfox38864.873Xenopus_tropicalis
ENSAMXG00000037246rbfox3a9884.242ENSXCOG00000018262rbfox3b10083.924Xiphophorus_couchianus
ENSAMXG00000037246rbfox3a10085.215ENSXMAG00000012939rbfox3b10083.554Xiphophorus_maculatus

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