EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000037247 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 5042 bases
Position: chrAPWO02002051.1:12796-17837
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000038352	RVT_1	PF00078.27	8.9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000045426	-	5042	-	ENSAMXP00000038352	1501 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000037247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000037247's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000037247	-	61	34.494	ENSAMXG00000030479	-	65	34.494
ENSAMXG00000037247	-	51	34.233	ENSAMXG00000039110	-	56	34.233
ENSAMXG00000037247	-	60	33.368	ENSAMXG00000043312	-	59	32.748
ENSAMXG00000037247	-	52	38.261	ENSAMXG00000035335	-	55	38.261
ENSAMXG00000037247	-	57	34.243	ENSAMXG00000038338	-	60	34.243
ENSAMXG00000037247	-	59	30.167	ENSAMXG00000039912	-	62	30.167
ENSAMXG00000037247	-	51	33.972	ENSAMXG00000037864	-	64	33.972
ENSAMXG00000037247	-	60	33.777	ENSAMXG00000039473	-	81	33.777
ENSAMXG00000037247	-	59	35.934	ENSAMXG00000033912	-	69	36.035
ENSAMXG00000037247	-	55	31.335	ENSAMXG00000035138	-	57	31.335
ENSAMXG00000037247	-	60	35.645	ENSAMXG00000038531	-	63	35.645
ENSAMXG00000037247	-	60	33.505	ENSAMXG00000038997	-	59	32.678
ENSAMXG00000037247	-	57	36.667	ENSAMXG00000043385	-	62	36.667
ENSAMXG00000037247	-	60	33.881	ENSAMXG00000044052	-	58	33.881
ENSAMXG00000037247	-	63	32.394	ENSAMXG00000032330	-	64	32.394

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000037247	-	52	31.172	ENSAPOG00000000887	-	51	31.266	Acanthochromis_polyacanthus
ENSAMXG00000037247	-	60	32.770	ENSAPOG00000011081	-	59	32.770	Acanthochromis_polyacanthus
ENSAMXG00000037247	-	58	33.261	ENSAPOG00000005387	-	58	32.775	Acanthochromis_polyacanthus
ENSAMXG00000037247	-	59	31.833	ENSAPOG00000022647	-	60	32.193	Acanthochromis_polyacanthus
ENSAMXG00000037247	-	61	34.322	ENSAPEG00000002572	-	90	34.322	Amphiprion_percula
ENSAMXG00000037247	-	61	48.726	ENSAPEG00000015779	-	62	48.514	Amphiprion_percula
ENSAMXG00000037247	-	50	52.031	ENSAPEG00000015494	-	58	51.769	Amphiprion_percula
ENSAMXG00000037247	-	58	34.088	ENSAPEG00000024442	-	58	33.577	Amphiprion_percula
ENSAMXG00000037247	-	54	48.499	ENSACLG00000019658	-	60	48.379	Astatotilapia_calliptera
ENSAMXG00000037247	-	62	32.615	ENSACLG00000018344	-	77	32.410	Astatotilapia_calliptera
ENSAMXG00000037247	-	60	34.569	ENSACLG00000003852	-	62	34.569	Astatotilapia_calliptera
ENSAMXG00000037247	-	54	30.813	ENSACLG00000001555	-	57	30.813	Astatotilapia_calliptera
ENSAMXG00000037247	-	60	34.483	ENSACLG00000015880	-	66	34.483	Astatotilapia_calliptera
ENSAMXG00000037247	-	63	46.033	ENSACLG00000000384	-	62	46.033	Astatotilapia_calliptera
ENSAMXG00000037247	-	60	32.573	ENSACLG00000020275	-	58	32.573	Astatotilapia_calliptera
ENSAMXG00000037247	-	58	33.079	ENSACLG00000012963	-	58	32.595	Astatotilapia_calliptera
ENSAMXG00000037247	-	60	47.391	ENSACLG00000027618	-	59	47.609	Astatotilapia_calliptera
ENSAMXG00000037247	-	54	30.813	ENSACLG00000013171	-	58	31.038	Astatotilapia_calliptera
ENSAMXG00000037247	-	98	54.563	ENSACLG00000003748	-	85	54.563	Astatotilapia_calliptera
ENSAMXG00000037247	-	50	34.810	ENSACLG00000005847	-	100	34.810	Astatotilapia_calliptera
ENSAMXG00000037247	-	61	35.263	ENSACLG00000003799	-	63	35.263	Astatotilapia_calliptera
ENSAMXG00000037247	-	54	48.379	ENSACLG00000002182	-	60	48.259	Astatotilapia_calliptera
ENSAMXG00000037247	-	98	59.409	ENSACLG00000013718	-	86	59.409	Astatotilapia_calliptera
ENSAMXG00000037247	-	60	48.482	ENSACLG00000024387	-	75	48.482	Astatotilapia_calliptera
ENSAMXG00000037247	-	60	33.720	ENSACLG00000005531	-	66	33.720	Astatotilapia_calliptera
ENSAMXG00000037247	-	53	31.685	ENSACLG00000021770	-	58	31.644	Astatotilapia_calliptera
ENSAMXG00000037247	-	60	34.483	ENSACLG00000027747	-	60	34.483	Astatotilapia_calliptera
ENSAMXG00000037247	-	50	34.332	ENSACLG00000025904	-	52	34.207	Astatotilapia_calliptera
ENSAMXG00000037247	-	61	35.370	ENSACLG00000006945	-	63	35.370	Astatotilapia_calliptera
ENSAMXG00000037247	-	52	31.219	ENSACLG00000005526	-	94	31.219	Astatotilapia_calliptera
ENSAMXG00000037247	-	54	31.798	ENSACLG00000020048	-	59	31.798	Astatotilapia_calliptera
ENSAMXG00000037247	-	98	59.341	ENSACLG00000002176	-	71	59.341	Astatotilapia_calliptera
ENSAMXG00000037247	-	58	63.905	ENSACLG00000004344	-	58	63.905	Astatotilapia_calliptera
ENSAMXG00000037247	-	65	30.709	ENSCVAG00000005047	-	55	30.709	Cyprinodon_variegatus
ENSAMXG00000037247	-	51	50.459	ENSCVAG00000019395	-	57	50.459	Cyprinodon_variegatus
ENSAMXG00000037247	-	58	33.989	ENSGAFG00000016352	-	72	33.368	Gambusia_affinis
ENSAMXG00000037247	-	57	53.551	ENSGAFG00000017103	-	57	53.551	Gambusia_affinis
ENSAMXG00000037247	-	60	34.578	ENSGAFG00000016760	-	60	34.578	Gambusia_affinis
ENSAMXG00000037247	-	60	34.060	ENSHBUG00000021107	-	57	34.025	Haplochromis_burtoni
ENSAMXG00000037247	-	60	31.942	ENSHCOG00000012267	-	76	31.942	Hippocampus_comes
ENSAMXG00000037247	-	60	32.113	ENSKMAG00000012706	-	59	32.113	Kryptolebias_marmoratus
ENSAMXG00000037247	-	55	35.132	ENSMZEG00005023862	-	73	35.132	Maylandia_zebra
ENSAMXG00000037247	-	55	63.780	ENSMZEG00005012274	-	58	63.780	Maylandia_zebra
ENSAMXG00000037247	-	52	35.049	ENSORLG00000024900	-	50	34.957	Oryzias_latipes
ENSAMXG00000037247	-	60	34.419	ENSORLG00000022054	-	63	34.419	Oryzias_latipes
ENSAMXG00000037247	-	88	30.007	ENSORLG00000029628	-	72	30.007	Oryzias_latipes
ENSAMXG00000037247	-	61	32.403	ENSORLG00000027277	-	62	32.403	Oryzias_latipes
ENSAMXG00000037247	-	61	35.363	ENSORLG00000023909	-	63	35.363	Oryzias_latipes
ENSAMXG00000037247	-	60	34.532	ENSORLG00000029990	-	63	34.532	Oryzias_latipes
ENSAMXG00000037247	-	60	34.611	ENSORLG00000030569	-	60	34.544	Oryzias_latipes
ENSAMXG00000037247	-	55	31.375	ENSORLG00000029163	-	57	31.375	Oryzias_latipes
ENSAMXG00000037247	-	69	31.490	ENSORLG00000022415	-	50	31.490	Oryzias_latipes
ENSAMXG00000037247	-	60	31.677	ENSORLG00000022989	-	58	31.677	Oryzias_latipes
ENSAMXG00000037247	-	84	41.654	ENSORLG00000023802	-	65	41.654	Oryzias_latipes
ENSAMXG00000037247	-	51	34.777	ENSORLG00000024878	-	79	34.777	Oryzias_latipes
ENSAMXG00000037247	-	54	31.207	ENSORLG00000022290	-	58	31.207	Oryzias_latipes
ENSAMXG00000037247	-	55	31.416	ENSORLG00000027440	-	57	31.416	Oryzias_latipes
ENSAMXG00000037247	-	60	32.790	ENSORLG00000023024	-	64	32.790	Oryzias_latipes
ENSAMXG00000037247	-	60	32.573	ENSORLG00000023514	-	64	32.573	Oryzias_latipes
ENSAMXG00000037247	-	82	41.686	ENSORLG00000026266	-	71	41.980	Oryzias_latipes
ENSAMXG00000037247	-	60	34.611	ENSORLG00000028547	-	60	34.544	Oryzias_latipes
ENSAMXG00000037247	-	61	35.363	ENSORLG00000022361	-	63	35.363	Oryzias_latipes
ENSAMXG00000037247	-	58	60.160	ENSORLG00000029435	-	60	60.160	Oryzias_latipes
ENSAMXG00000037247	-	84	41.731	ENSORLG00020005747	-	65	41.731	Oryzias_latipes_hni
ENSAMXG00000037247	-	56	34.163	ENSORLG00020017608	-	77	34.163	Oryzias_latipes_hni
ENSAMXG00000037247	-	84	41.731	ENSORLG00020015468	-	65	41.731	Oryzias_latipes_hni
ENSAMXG00000037247	-	58	60.046	ENSORLG00020022538	-	60	60.046	Oryzias_latipes_hni
ENSAMXG00000037247	-	61	35.326	ENSORLG00020000868	-	70	35.326	Oryzias_latipes_hni
ENSAMXG00000037247	-	60	32.790	ENSORLG00020007775	-	64	32.790	Oryzias_latipes_hni
ENSAMXG00000037247	-	60	33.619	ENSORLG00020009176	-	61	33.619	Oryzias_latipes_hni
ENSAMXG00000037247	-	54	31.321	ENSORLG00020007237	-	58	31.321	Oryzias_latipes_hni
ENSAMXG00000037247	-	61	32.380	ENSORLG00015003194	-	60	32.380	Oryzias_latipes_hsok
ENSAMXG00000037247	-	63	32.103	ENSORLG00015022419	-	67	32.103	Oryzias_latipes_hsok
ENSAMXG00000037247	-	63	57.053	ENSORLG00015022999	-	60	57.053	Oryzias_latipes_hsok
ENSAMXG00000037247	-	53	60.701	ENSORLG00015017494	-	64	60.701	Oryzias_latipes_hsok
ENSAMXG00000037247	-	60	33.725	ENSORLG00015000431	-	61	33.725	Oryzias_latipes_hsok
ENSAMXG00000037247	-	57	34.078	ENSORLG00015010457	-	64	34.240	Oryzias_latipes_hsok
ENSAMXG00000037247	-	66	31.885	ENSORLG00015022031	-	58	31.885	Oryzias_latipes_hsok
ENSAMXG00000037247	-	84	41.744	ENSORLG00015000522	-	65	41.744	Oryzias_latipes_hsok
ENSAMXG00000037247	-	60	33.153	ENSORLG00015001207	-	70	33.153	Oryzias_latipes_hsok
ENSAMXG00000037247	-	60	34.504	ENSORLG00015013242	-	61	34.436	Oryzias_latipes_hsok
ENSAMXG00000037247	-	60	32.325	ENSOMEG00000021861	-	57	32.292	Oryzias_melastigma
ENSAMXG00000037247	-	70	32.000	ENSOMEG00000012792	-	61	32.000	Oryzias_melastigma
ENSAMXG00000037247	-	61	33.929	ENSOMEG00000012350	-	62	33.929	Oryzias_melastigma
ENSAMXG00000037247	-	60	32.634	ENSOMEG00000000573	-	80	32.634	Oryzias_melastigma
ENSAMXG00000037247	-	61	33.608	ENSPKIG00000002357	-	56	33.608	Paramormyrops_kingsleyae
ENSAMXG00000037247	-	60	34.167	ENSPKIG00000010959	-	58	34.167	Paramormyrops_kingsleyae
ENSAMXG00000037247	-	58	32.573	ENSPKIG00000000869	-	58	32.214	Paramormyrops_kingsleyae
ENSAMXG00000037247	-	62	32.298	ENSPKIG00000014510	-	57	32.298	Paramormyrops_kingsleyae
ENSAMXG00000037247	-	61	31.568	ENSPKIG00000021764	-	61	31.568	Paramormyrops_kingsleyae
ENSAMXG00000037247	-	60	32.746	ENSPKIG00000023888	-	62	32.746	Paramormyrops_kingsleyae
ENSAMXG00000037247	-	61	34.559	ENSPREG00000004621	-	61	34.559	Poecilia_reticulata
ENSAMXG00000037247	-	56	48.000	ENSPREG00000003809	-	60	48.000	Poecilia_reticulata
ENSAMXG00000037247	-	61	34.874	ENSPNAG00000009767	-	92	34.874	Pygocentrus_nattereri
ENSAMXG00000037247	-	60	35.000	ENSSLDG00000001005	-	62	35.000	Seriola_lalandi_dorsalis
ENSAMXG00000037247	-	62	32.317	ENSSPAG00000006326	-	61	32.520	Stegastes_partitus
ENSAMXG00000037247	-	61	47.766	ENSXMAG00000029413	-	63	47.766	Xiphophorus_maculatus
ENSAMXG00000037247	-	59	33.222	ENSXMAG00000024180	-	84	33.222	Xiphophorus_maculatus
ENSAMXG00000037247	-	58	33.869	ENSXMAG00000029008	-	58	33.368	Xiphophorus_maculatus
ENSAMXG00000037247	-	61	33.160	ENSXMAG00000022175	-	58	33.160	Xiphophorus_maculatus
ENSAMXG00000037247	-	61	35.622	ENSXMAG00000028850	-	63	35.622	Xiphophorus_maculatus
ENSAMXG00000037247	-	61	35.622	ENSXMAG00000021696	-	63	35.622	Xiphophorus_maculatus
ENSAMXG00000037247	-	54	32.186	ENSXMAG00000023476	-	58	32.186	Xiphophorus_maculatus
ENSAMXG00000037247	-	50	33.670	ENSXMAG00000021254	-	53	33.670	Xiphophorus_maculatus
ENSAMXG00000037247	-	61	35.622	ENSXMAG00000023206	-	63	35.622	Xiphophorus_maculatus
ENSAMXG00000037247	-	58	33.869	ENSXMAG00000028155	-	58	33.368	Xiphophorus_maculatus
ENSAMXG00000037247	-	54	32.186	ENSXMAG00000022790	-	58	32.186	Xiphophorus_maculatus
ENSAMXG00000037247	-	54	30.881	ENSXMAG00000025715	-	59	30.881	Xiphophorus_maculatus
ENSAMXG00000037247	-	60	34.657	ENSXMAG00000021686	-	63	34.657	Xiphophorus_maculatus
ENSAMXG00000037247	-	61	47.766	ENSXMAG00000025551	-	82	47.766	Xiphophorus_maculatus
ENSAMXG00000037247	-	62	32.413	ENSXMAG00000026492	-	59	32.413	Xiphophorus_maculatus
ENSAMXG00000037247	-	63	34.202	ENSXMAG00000022159	-	73	34.202	Xiphophorus_maculatus
ENSAMXG00000037247	-	61	47.766	ENSXMAG00000023536	-	63	47.766	Xiphophorus_maculatus
ENSAMXG00000037247	-	60	35.313	ENSXMAG00000024126	-	63	35.313	Xiphophorus_maculatus