EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMXG00000037267 (Gene tree)
Gene ID
103035226
Gene Symbol
-
Alias
-
Full Name
ras-related protein Rab-5C
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Plus strand
Length
10595 bases
Position
chr4:18708334-18718928
Accession
103035226
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000053988MMR_HSR1PF01926.230.0001711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000046211-4914XM_007248736ENSAMXP00000053988211 (aa)XP_007248798UPI000440D01C
Gene Model
Click here to download ENSAMXG00000037267's gene model file
Pathways
Pathway IDPathway NameSource
amex04144EndocytosisKEGG
amex04145PhagosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000037267's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMXG00000037267-8035.795ENSAMXG00000026059RAB9A8536.000
ENSAMXG00000037267-8147.701ENSAMXG00000029712rab25b8048.521
ENSAMXG00000037267-8232.584ENSAMXG00000033907hrasb8731.737
ENSAMXG00000037267-9242.564ENSAMXG00000034850-9642.051
ENSAMXG00000037267-9985.782ENSAMXG00000035919rab5ab9685.308
ENSAMXG00000037267-9240.796ENSAMXG00000009935rab307740.796
ENSAMXG00000037267-7941.520ENSAMXG00000040460zgc:1015597041.520
ENSAMXG00000037267-9243.500ENSAMXG00000040879rab25a7947.337
ENSAMXG00000037267-5533.065ENSAMXG00000034227rab32b5833.065
ENSAMXG00000037267-7745.399ENSAMXG00000039486zgc:1719277845.399
ENSAMXG00000037267-7641.358ENSAMXG00000039737RAB197441.358
ENSAMXG00000037267-7336.129ENSAMXG00000033390rap1aa7936.129
ENSAMXG00000037267-7746.914ENSAMXG00000024632rab11al7946.914
ENSAMXG00000037267-9238.660ENSAMXG00000030712rab138042.236
ENSAMXG00000037267-7540.252ENSAMXG00000043951rab157540.252
ENSAMXG00000037267-9234.848ENSAMXG00000042419rab3c7637.349
ENSAMXG00000037267-5732.258ENSAMXG00000032775arl8bb6332.258
ENSAMXG00000037267-7748.466ENSAMXG00000037623-7548.466
ENSAMXG00000037267-7833.333ENSAMXG00000012327nras9133.333
ENSAMXG00000037267-7931.737ENSAMXG00000035885hrasa8731.737
ENSAMXG00000037267-10090.367ENSAMXG00000043717rab5c9890.367
ENSAMXG00000037267-8535.354ENSAMXG00000037428-8036.310
ENSAMXG00000037267-6135.659ENSAMXG00000003504rab205035.659
ENSAMXG00000037267-9233.005ENSAMXG00000025889RAB9A9733.005
ENSAMXG00000037267-7436.250ENSAMXG00000017266rab366136.250
ENSAMXG00000037267-7940.698ENSAMXG00000004882rab127040.698
ENSAMXG00000037267-7935.429ENSAMXG00000026476rab9b8733.659
ENSAMXG00000037267-7747.853ENSAMXG00000042655rab11bb7547.853
ENSAMXG00000037267-8642.541ENSAMXG00000004630rab6ba9044.118
ENSAMXG00000037267-7336.774ENSAMXG00000040611rabl26836.774
ENSAMXG00000037267-9332.843ENSAMXG00000032729rab42a7735.976
ENSAMXG00000037267-8630.220ENSAMXG00000014960rab237934.969
ENSAMXG00000037267-9236.410ENSAMXG00000039865rab35b9636.410
ENSAMXG00000037267-8941.489ENSAMXG00000040126-6042.683
ENSAMXG00000037267-8241.279ENSAMXG00000038243si:dkey-16l2.169637.811
ENSAMXG00000037267-7737.195ENSAMXG00000003717rab39bb7737.195
ENSAMXG00000037267-5631.148ENSAMXG00000039062arl8a6231.148
ENSAMXG00000037267-7538.365ENSAMXG00000033470RAB157538.365
ENSAMXG00000037267-9341.919ENSAMXG00000042073rab18b8045.455
ENSAMXG00000037267-8144.444ENSAMXG00000032547rab6a8243.860
ENSAMXG00000037267-5632.787ENSAMXG00000030683arl8ba6232.787
ENSAMXG00000037267-7634.731ENSAMXG00000032663si:dkey-13a21.47634.731
ENSAMXG00000037267-9230.882ENSAMXG00000043003rab34a6233.125
ENSAMXG00000037267-7833.133ENSAMXG00000017217kras9032.164
ENSAMXG00000037267-8231.148ENSAMXG00000036330RAB388332.240
ENSAMXG00000037267-9235.897ENSAMXG00000040604-9635.897
ENSAMXG00000037267-9540.097ENSAMXG00000002254-9940.097
ENSAMXG00000037267-8042.012ENSAMXG00000033216rab418841.279
ENSAMXG00000037267-9233.803ENSAMXG00000040286rab33ba7536.066
ENSAMXG00000037267-8941.489ENSAMXG00000009640rab147643.293
ENSAMXG00000037267-9240.000ENSAMXG00000032027rab7a9640.000
ENSAMXG00000037267-8132.022ENSAMXG00000033069si:cabz01085950.18332.370
ENSAMXG00000037267-8042.857ENSAMXG00000036772rab2a7644.099
ENSAMXG00000037267-9987.143ENSAMXG00000036179rab5aa9685.238
ENSAMXG00000037267-7737.195ENSAMXG00000041657rab39ba7737.195
ENSAMXG00000037267-9348.980ENSAMXG00000013054rab22a8354.601
ENSAMXG00000037267-9540.291ENSAMXG00000031957zgc:1009189940.291
ENSAMXG00000037267-6833.793ENSAMXG00000029130-7833.793
ENSAMXG00000037267-7747.853ENSAMXG00000003155rab11a7647.853
ENSAMXG00000037267-9242.564ENSAMXG00000003547rab1ba8742.857
ENSAMXG00000037267-9244.103ENSAMXG00000032564rab1ab9644.103
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000037267-9990.952ENSG00000108774RAB5C9597.458Homo_sapiens
ENSAMXG00000037267-9991.346ENSAPOG00000016864rab5c9591.346Acanthochromis_polyacanthus
ENSAMXG00000037267-9990.476ENSAMEG00000006003RAB5C9688.571Ailuropoda_melanoleuca
ENSAMXG00000037267-9991.827ENSACIG00000010896rab5c9691.827Amphilophus_citrinellus
ENSAMXG00000037267-9991.346ENSAOCG00000016614rab5c9591.346Amphiprion_ocellaris
ENSAMXG00000037267-9990.909ENSAPEG00000017868-9591.346Amphiprion_percula
ENSAMXG00000037267-9991.866ENSATEG00000001937rab5c9592.308Anabas_testudineus
ENSAMXG00000037267-9492.965ENSANAG00000025390RAB5C8996.154Aotus_nancymaae
ENSAMXG00000037267-9989.100ENSACLG00000008615-9589.100Astatotilapia_calliptera
ENSAMXG00000037267-9990.865ENSACLG00000002706rab5c9590.865Astatotilapia_calliptera
ENSAMXG00000037267-9990.476ENSBTAG00000006982RAB5C9688.095Bos_taurus
ENSAMXG00000037267-9975.962WBGene00004268rab-59575.481Caenorhabditis_elegans
ENSAMXG00000037267-9990.476ENSCAFG00000015629RAB5C9688.571Canis_familiaris
ENSAMXG00000037267-9990.476ENSCAFG00020013537RAB5C9688.571Canis_lupus_dingo
ENSAMXG00000037267-9990.476ENSCHIG00000012960RAB5C9688.095Capra_hircus
ENSAMXG00000037267-9990.952ENSTSYG00000030531RAB5C9688.571Carlito_syrichta
ENSAMXG00000037267-9990.952ENSCCAG00000025940RAB5C9688.571Cebus_capucinus
ENSAMXG00000037267-9990.952ENSCATG00000040873RAB5C9688.571Cercocebus_atys
ENSAMXG00000037267-9991.827ENSCLAG00000016650RAB5C9589.423Chinchilla_lanigera
ENSAMXG00000037267-8296.512ENSCHOG00000009886RAB5C9796.512Choloepus_hoffmanni
ENSAMXG00000037267-9976.190ENSCING00000003340-9576.190Ciona_intestinalis
ENSAMXG00000037267-9976.744ENSCSAVG00000000613-9484.416Ciona_savignyi
ENSAMXG00000037267-9991.429ENSCGRG00001014226Rab5c9689.048Cricetulus_griseus_chok1gshd
ENSAMXG00000037267-9991.429ENSCGRG00000007534Rab5c9689.048Cricetulus_griseus_crigri
ENSAMXG00000037267-9991.346ENSCSEG00000017024rab5c9591.346Cynoglossus_semilaevis
ENSAMXG00000037267-9990.865ENSCVAG00000009550rab5c9590.865Cyprinodon_variegatus
ENSAMXG00000037267-9990.476ENSDNOG00000038853RAB5C9688.095Dasypus_novemcinctus
ENSAMXG00000037267-9991.827ENSDORG00000006819Rab5c9589.423Dipodomys_ordii
ENSAMXG00000037267-9972.857FBgn0014010Rab58281.667Drosophila_melanogaster
ENSAMXG00000037267-9977.885ENSEBUG00000014794rab5c8487.640Eptatretus_burgeri
ENSAMXG00000037267-9990.476ENSEASG00005009281RAB5C9688.571Equus_asinus_asinus
ENSAMXG00000037267-9990.952ENSECAG00000025054RAB5C9688.571Equus_caballus
ENSAMXG00000037267-9990.476ENSEEUG00000002790RAB5C9688.095Erinaceus_europaeus
ENSAMXG00000037267-9989.423ENSELUG00000010439-9589.423Esox_lucius
ENSAMXG00000037267-9992.788ENSELUG00000018516rab5c9692.788Esox_lucius
ENSAMXG00000037267-9990.476ENSFCAG00000002148RAB5C9688.095Felis_catus
ENSAMXG00000037267-9990.476ENSFDAG00000021541RAB5C9688.571Fukomys_damarensis
ENSAMXG00000037267-9988.571ENSFHEG00000015268-9588.571Fundulus_heteroclitus
ENSAMXG00000037267-9991.827ENSFHEG00000012117rab5c9591.827Fundulus_heteroclitus
ENSAMXG00000037267-9990.865ENSGMOG00000015096rab5c9590.865Gadus_morhua
ENSAMXG00000037267-8286.127ENSGMOG00000001876-10086.127Gadus_morhua
ENSAMXG00000037267-9991.827ENSGAFG00000000884rab5c9591.827Gambusia_affinis
ENSAMXG00000037267-9591.000ENSGAFG00000003642-9587.678Gambusia_affinis
ENSAMXG00000037267-9989.423ENSGACG00000008659rab5c9589.423Gasterosteus_aculeatus
ENSAMXG00000037267-9990.952ENSGGOG00000005472RAB5C9688.571Gorilla_gorilla
ENSAMXG00000037267-9990.865ENSHBUG00000002014rab5c9590.865Haplochromis_burtoni
ENSAMXG00000037267-9989.100ENSHBUG00000006823-9589.100Haplochromis_burtoni
ENSAMXG00000037267-9989.048ENSHGLG00000012067RAB5C9687.143Heterocephalus_glaber_female
ENSAMXG00000037267-9982.464ENSHCOG00000020238-9581.991Hippocampus_comes
ENSAMXG00000037267-10089.450ENSHCOG00000004662rab5c9789.450Hippocampus_comes
ENSAMXG00000037267-10089.100ENSIPUG00000020082rab5c9789.100Ictalurus_punctatus
ENSAMXG00000037267-9990.476ENSSTOG00000006620RAB5C9689.048Ictidomys_tridecemlineatus
ENSAMXG00000037267-9990.952ENSJJAG00000021181Rab5c9688.571Jaculus_jaculus
ENSAMXG00000037267-9991.827ENSKMAG00000020038rab5c9591.827Kryptolebias_marmoratus
ENSAMXG00000037267-9988.462ENSKMAG00000017417-9588.462Kryptolebias_marmoratus
ENSAMXG00000037267-9990.385ENSLBEG00000010408-9490.385Labrus_bergylta
ENSAMXG00000037267-9993.269ENSLBEG00000004128rab5c9593.269Labrus_bergylta
ENSAMXG00000037267-9990.909ENSLOCG00000012566rab5c9689.423Lepisosteus_oculatus
ENSAMXG00000037267-9990.952ENSMFAG00000039627RAB5C9788.571Macaca_fascicularis
ENSAMXG00000037267-9990.952ENSMNEG00000000355RAB5C9688.571Macaca_nemestrina
ENSAMXG00000037267-9992.788ENSMAMG00000022322rab5c9592.788Mastacembelus_armatus
ENSAMXG00000037267-9988.942ENSMAMG00000016207-9588.942Mastacembelus_armatus
ENSAMXG00000037267-9990.865ENSMZEG00005022735rab5c9590.865Maylandia_zebra
ENSAMXG00000037267-9989.100ENSMZEG00005021090-9589.100Maylandia_zebra
ENSAMXG00000037267-9991.429ENSMAUG00000015005Rab5c9689.048Mesocricetus_auratus
ENSAMXG00000037267-9990.952ENSMICG00000041608RAB5C9688.571Microcebus_murinus
ENSAMXG00000037267-9991.429ENSMOCG00000018531-9689.048Microtus_ochrogaster
ENSAMXG00000037267-9991.346ENSMMOG00000020621rab5c9591.346Mola_mola
ENSAMXG00000037267-9986.058ENSMALG00000006052rab5c9486.058Monopterus_albus
ENSAMXG00000037267-9988.942ENSMALG00000022348-9588.942Monopterus_albus
ENSAMXG00000037267-9991.429MGP_CAROLIEiJ_G0017184Rab5c9689.048Mus_caroli
ENSAMXG00000037267-9991.429ENSMUSG00000019173Rab5c9689.048Mus_musculus
ENSAMXG00000037267-9991.429MGP_PahariEiJ_G0018314Rab5c9689.048Mus_pahari
ENSAMXG00000037267-9991.429MGP_SPRETEiJ_G0018027Rab5c9689.048Mus_spretus
ENSAMXG00000037267-9990.476ENSMPUG00000010554RAB5C9688.571Mustela_putorius_furo
ENSAMXG00000037267-9990.865ENSNGAG00000010286Rab5c9588.462Nannospalax_galili
ENSAMXG00000037267-9989.100ENSNBRG00000016922-9589.100Neolamprologus_brichardi
ENSAMXG00000037267-9991.827ENSNBRG00000018165rab5c9591.827Neolamprologus_brichardi
ENSAMXG00000037267-8288.953ENSOPRG00000008255RAB5C9788.953Ochotona_princeps
ENSAMXG00000037267-9991.346ENSODEG00000017920RAB5C9588.942Octodon_degus
ENSAMXG00000037267-9991.827ENSONIG00000001113rab5c9591.827Oreochromis_niloticus
ENSAMXG00000037267-9990.431ENSORLG00000003882rab5c9590.865Oryzias_latipes
ENSAMXG00000037267-9990.385ENSORLG00020008388rab5c9590.385Oryzias_latipes_hni
ENSAMXG00000037267-9990.431ENSORLG00015021900rab5c9590.865Oryzias_latipes_hsok
ENSAMXG00000037267-9990.431ENSOMEG00000023078rab5c9590.865Oryzias_melastigma
ENSAMXG00000037267-9991.346ENSOGAG00000009456RAB5C9588.942Otolemur_garnettii
ENSAMXG00000037267-9990.476ENSOARG00000018768RAB5C9688.095Ovis_aries
ENSAMXG00000037267-9990.952ENSPPAG00000037206RAB5C9688.571Pan_paniscus
ENSAMXG00000037267-9990.476ENSPPRG00000005745RAB5C9688.095Panthera_pardus
ENSAMXG00000037267-9990.476ENSPTIG00000008177RAB5C9688.095Panthera_tigris_altaica
ENSAMXG00000037267-9990.952ENSPTRG00000009194RAB5C9788.571Pan_troglodytes
ENSAMXG00000037267-9988.038ENSPKIG00000020112-9688.462Paramormyrops_kingsleyae
ENSAMXG00000037267-9988.942ENSPKIG00000001237-9687.981Paramormyrops_kingsleyae
ENSAMXG00000037267-9991.827ENSPMGG00000010792rab5c9691.827Periophthalmus_magnuspinnatus
ENSAMXG00000037267-9991.429ENSPEMG00000017971Rab5c9689.048Peromyscus_maniculatus_bairdii
ENSAMXG00000037267-8785.106ENSPMAG00000000008rab5c8485.870Petromyzon_marinus
ENSAMXG00000037267-10077.251ENSPMAG00000001399rab5c9776.777Petromyzon_marinus
ENSAMXG00000037267-9978.095ENSPMAG00000007867rab5c8685.165Petromyzon_marinus
ENSAMXG00000037267-10090.521ENSPCIG00000020225-9788.152Phascolarctos_cinereus
ENSAMXG00000037267-9991.827ENSPLAG00000004790rab5c9591.827Poecilia_latipinna
ENSAMXG00000037267-9988.571ENSPLAG00000016333-9588.571Poecilia_latipinna
ENSAMXG00000037267-9889.320ENSPMEG00000012614-9588.208Poecilia_mexicana
ENSAMXG00000037267-9991.827ENSPMEG00000011336rab5c9591.827Poecilia_mexicana
ENSAMXG00000037267-8691.758ENSPREG00000022167-8694.643Poecilia_reticulata
ENSAMXG00000037267-9991.827ENSPREG00000010146rab5c9591.827Poecilia_reticulata
ENSAMXG00000037267-9990.952ENSPPYG00000008398RAB5C9688.571Pongo_abelii
ENSAMXG00000037267-9989.048ENSPCAG00000016412RAB5C9686.667Procavia_capensis
ENSAMXG00000037267-9990.000ENSPCOG00000026327RAB5C9688.095Propithecus_coquereli
ENSAMXG00000037267-9990.952ENSPVAG00000003867RAB5C9688.571Pteropus_vampyrus
ENSAMXG00000037267-9989.100ENSPNYG00000015851-9589.100Pundamilia_nyererei
ENSAMXG00000037267-9990.865ENSPNYG00000010615rab5c9590.865Pundamilia_nyererei
ENSAMXG00000037267-10097.156ENSPNAG00000002218-9997.156Pygocentrus_nattereri
ENSAMXG00000037267-10090.367ENSPNAG00000028138rab5c9890.367Pygocentrus_nattereri
ENSAMXG00000037267-9991.429ENSRNOG00000018568Rab5c9689.048Rattus_norvegicus
ENSAMXG00000037267-9990.952ENSRBIG00000031376RAB5C9688.571Rhinopithecus_bieti
ENSAMXG00000037267-9990.952ENSRROG00000032895RAB5C9688.571Rhinopithecus_roxellana
ENSAMXG00000037267-9990.952ENSSBOG00000032552-9688.571Saimiri_boliviensis_boliviensis
ENSAMXG00000037267-9990.952ENSSHAG00000005267-9688.571Sarcophilus_harrisii
ENSAMXG00000037267-9986.058ENSSFOG00015009988-9586.058Scleropages_formosus
ENSAMXG00000037267-9593.532ENSSMAG00000007323rab5c9593.269Scophthalmus_maximus
ENSAMXG00000037267-9992.308ENSSDUG00000023008rab5c9592.308Seriola_dumerili
ENSAMXG00000037267-9991.346ENSSLDG00000017771rab5c9591.346Seriola_lalandi_dorsalis
ENSAMXG00000037267-9990.000ENSSPUG00000012950-9688.095Sphenodon_punctatus
ENSAMXG00000037267-9992.788ENSSPAG00000006436rab5c9592.788Stegastes_partitus
ENSAMXG00000037267-9990.476ENSSSCG00000032467RAB5C9688.095Sus_scrofa
ENSAMXG00000037267-9991.346ENSTRUG00000015590rab5c9591.346Takifugu_rubripes
ENSAMXG00000037267-9992.308ENSTNIG00000011711rab5c9492.308Tetraodon_nigroviridis
ENSAMXG00000037267-9990.952ENSTBEG00000007092RAB5C9688.571Tupaia_belangeri
ENSAMXG00000037267-9990.000ENSTTRG00000006673RAB5C9688.095Tursiops_truncatus
ENSAMXG00000037267-9990.476ENSUAMG00000024343RAB5C9688.571Ursus_americanus
ENSAMXG00000037267-9990.476ENSUMAG00000023270RAB5C9688.571Ursus_maritimus
ENSAMXG00000037267-10090.995ENSXCOG00000016788rab5c9890.995Xiphophorus_couchianus
ENSAMXG00000037267-9690.594ENSXCOG00000006300-9687.324Xiphophorus_couchianus
ENSAMXG00000037267-9988.571ENSXMAG00000022179-9588.571Xiphophorus_maculatus
ENSAMXG00000037267-9991.827ENSXMAG00000003266rab5c9591.827Xiphophorus_maculatus

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