EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSAMXG00000037292 (Gene tree)
Gene ID
103041319
Gene Symbol
ptcd1
Alias
wu:fi36d06
Full Name
pentatricopeptide repeat-containing protein 1%2C mitochondrial-like
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Minus strand
Length
8078 bases
Position
chr12:22654418-22662495
Accession
103041319
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000040225PPRPF01535.202.5e-1011
ENSAMXP00000043358PPRPF01535.202.6e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000046240-3115XM_007260272ENSAMXP00000040225713 (aa)XP_007260334UPI000BBD9EEE
ENSAMXT00000047886-3552-ENSAMXP00000043358682 (aa)--
Gene Model
Click here to download ENSAMXG00000037292's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000037292's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000037292ptcd19146.799ENSG00000248919ATP5MF-PTCD18247.188Homo_sapiens
ENSAMXG00000037292ptcd19146.799ENSG00000106246PTCD18747.188Homo_sapiens
ENSAMXG00000037292ptcd18551.463ENSAPOG00000010679ptcd18550.947Acanthochromis_polyacanthus
ENSAMXG00000037292ptcd18849.843ENSAMEG00000006224-8050.079Ailuropoda_melanoleuca
ENSAMXG00000037292ptcd18553.191ENSACIG00000017861ptcd18453.028Amphilophus_citrinellus
ENSAMXG00000037292ptcd18751.452ENSAOCG00000020741-8251.212Amphiprion_ocellaris
ENSAMXG00000037292ptcd18751.347ENSAOCG00000022617ptcd18451.010Amphiprion_ocellaris
ENSAMXG00000037292ptcd18751.290ENSAPEG00000022632ptcd18251.050Amphiprion_percula
ENSAMXG00000037292ptcd19348.657ENSATEG00000007016ptcd18151.718Anabas_testudineus
ENSAMXG00000037292ptcd18752.244ENSAPLG00000006862-9451.669Anas_platyrhynchos
ENSAMXG00000037292ptcd18850.157ENSACAG00000012871-8050.157Anolis_carolinensis
ENSAMXG00000037292ptcd18945.866ENSANAG00000035790-9046.729Aotus_nancymaae
ENSAMXG00000037292ptcd18751.675ENSACLG00000002824ptcd18251.515Astatotilapia_calliptera
ENSAMXG00000037292ptcd18847.812ENSBTAG00000020440-7648.056Bos_taurus
ENSAMXG00000037292ptcd19146.615ENSCJAG00000015815-8946.769Callithrix_jacchus
ENSAMXG00000037292ptcd18849.449ENSCAFG00000015055-8049.209Canis_familiaris
ENSAMXG00000037292ptcd18849.449ENSCAFG00020014480-8049.209Canis_lupus_dingo
ENSAMXG00000037292ptcd18849.142ENSCHIG00000027000-8749.145Capra_hircus
ENSAMXG00000037292ptcd19047.287ENSTSYG00000029495-8747.287Carlito_syrichta
ENSAMXG00000037292ptcd18846.022ENSCAPG00000014660-9345.736Cavia_aperea
ENSAMXG00000037292ptcd18847.114ENSCPOG00000001780-8746.822Cavia_porcellus
ENSAMXG00000037292ptcd18946.406ENSCCAG00000034025-8846.802Cebus_capucinus
ENSAMXG00000037292ptcd19146.308ENSCATG00000040859-8946.308Cercocebus_atys
ENSAMXG00000037292ptcd19345.753ENSCLAG00000006354-8646.708Chinchilla_lanigera
ENSAMXG00000037292ptcd18846.192ENSCSAG00000017794-8944.976Chlorocebus_sabaeus
ENSAMXG00000037292ptcd19250.517ENSCPBG00000020866-8949.926Chrysemys_picta_bellii
ENSAMXG00000037292ptcd17830.233ENSCING00000007717-7739.286Ciona_intestinalis
ENSAMXG00000037292ptcd18947.031ENSCANG00000023441-8747.188Colobus_angolensis_palliatus
ENSAMXG00000037292ptcd18847.452ENSCGRG00001023686Ptcd18647.452Cricetulus_griseus_chok1gshd
ENSAMXG00000037292ptcd18847.452ENSCGRG00000015031Ptcd18547.452Cricetulus_griseus_crigri
ENSAMXG00000037292ptcd18748.878ENSCSEG00000002378ptcd18248.718Cynoglossus_semilaevis
ENSAMXG00000037292ptcd18652.951ENSCVAG00000003621ptcd18753.181Cyprinodon_variegatus
ENSAMXG00000037292ptcd18553.934ENSCVAG00000015826ptcd18153.607Cyprinodon_variegatus
ENSAMXG00000037292ptcd18864.567ENSDARG00000076176ptcd18864.567Danio_rerio
ENSAMXG00000037292ptcd18747.950ENSDNOG00000009957-8648.504Dasypus_novemcinctus
ENSAMXG00000037292ptcd19645.797ENSDORG00000000740Ptcd19545.652Dipodomys_ordii
ENSAMXG00000037292ptcd18838.253ENSEBUG00000014515ptcd19738.422Eptatretus_burgeri
ENSAMXG00000037292ptcd19446.233ENSEASG00005002480-8648.585Equus_asinus_asinus
ENSAMXG00000037292ptcd18847.874ENSECAG00000016617-8648.270Equus_caballus
ENSAMXG00000037292ptcd19251.054ENSELUG00000016517ptcd18750.602Esox_lucius
ENSAMXG00000037292ptcd19148.694ENSFCAG00000015069-8649.685Felis_catus
ENSAMXG00000037292ptcd19648.455ENSFALG00000013803-8652.269Ficedula_albicollis
ENSAMXG00000037292ptcd18648.065ENSFDAG00000006393-8647.854Fukomys_damarensis
ENSAMXG00000037292ptcd17650.549ENSFHEG00000012491ptcd18750.738Fundulus_heteroclitus
ENSAMXG00000037292ptcd18452.145ENSGMOG00000007639ptcd19151.747Gadus_morhua
ENSAMXG00000037292ptcd18852.373ENSGALG00000004711-8851.077Gallus_gallus
ENSAMXG00000037292ptcd18650.814ENSGAFG00000013175ptcd18350.651Gambusia_affinis
ENSAMXG00000037292ptcd19350.000ENSGACG00000016607ptcd19750.075Gasterosteus_aculeatus
ENSAMXG00000037292ptcd18850.968ENSGAGG00000021832-8849.920Gopherus_agassizii
ENSAMXG00000037292ptcd19146.880ENSGGOG00000015123-8747.031Gorilla_gorilla
ENSAMXG00000037292ptcd18750.924ENSHBUG00000018275ptcd18051.882Haplochromis_burtoni
ENSAMXG00000037292ptcd19447.470ENSHGLG00000017621-8647.874Heterocephalus_glaber_female
ENSAMXG00000037292ptcd19447.470ENSHGLG00100007218-8647.874Heterocephalus_glaber_male
ENSAMXG00000037292ptcd18548.860ENSHCOG00000010784ptcd18248.768Hippocampus_comes
ENSAMXG00000037292ptcd18947.642ENSSTOG00000001682-8747.476Ictidomys_tridecemlineatus
ENSAMXG00000037292ptcd18848.113ENSJJAG00000000319Ptcd18848.428Jaculus_jaculus
ENSAMXG00000037292ptcd18550.244ENSKMAG00000008708ptcd18150.575Kryptolebias_marmoratus
ENSAMXG00000037292ptcd18949.214ENSLBEG00000008061ptcd18449.214Labrus_bergylta
ENSAMXG00000037292ptcd18952.019ENSLACG00000011172ptcd18652.019Latimeria_chalumnae
ENSAMXG00000037292ptcd19052.672ENSLOCG00000004833ptcd19752.006Lepisosteus_oculatus
ENSAMXG00000037292ptcd18846.440ENSLAFG00000002588-8646.440Loxodonta_africana
ENSAMXG00000037292ptcd19146.308ENSMFAG00000041324-8946.308Macaca_fascicularis
ENSAMXG00000037292ptcd19146.462ENSMMUG00000030408-8946.462Macaca_mulatta
ENSAMXG00000037292ptcd19146.308ENSMNEG00000043786-8946.308Macaca_nemestrina
ENSAMXG00000037292ptcd19133.179ENSMLEG00000031179-8733.179Mandrillus_leucophaeus
ENSAMXG00000037292ptcd18851.987ENSMAMG00000007623ptcd18251.987Mastacembelus_armatus
ENSAMXG00000037292ptcd18751.510ENSMZEG00005012722ptcd18251.351Maylandia_zebra
ENSAMXG00000037292ptcd18751.122ENSMGAG00000004211-7951.360Meleagris_gallopavo
ENSAMXG00000037292ptcd19047.149ENSMICG00000017428-8847.068Microcebus_murinus
ENSAMXG00000037292ptcd19049.691ENSMMOG00000020243ptcd18851.645Mola_mola
ENSAMXG00000037292ptcd18749.369ENSMODG00000001350-8349.369Monodelphis_domestica
ENSAMXG00000037292ptcd18751.768ENSMALG00000018442ptcd18152.083Monopterus_albus
ENSAMXG00000037292ptcd18748.083MGP_CAROLIEiJ_G0028011Ptcd18648.403Mus_caroli
ENSAMXG00000037292ptcd18747.687ENSMUSG00000029624Ptcd18648.172Mus_musculus
ENSAMXG00000037292ptcd18748.960MGP_PahariEiJ_G0024580Ptcd18648.960Mus_pahari
ENSAMXG00000037292ptcd18747.536MGP_SPRETEiJ_G0029012Ptcd18648.254Mus_spretus
ENSAMXG00000037292ptcd18848.913ENSMPUG00000016518-8848.165Mustela_putorius_furo
ENSAMXG00000037292ptcd18848.107ENSMLUG00000010994-8148.107Myotis_lucifugus
ENSAMXG00000037292ptcd18850.946ENSNBRG00000010079ptcd18650.789Neolamprologus_brichardi
ENSAMXG00000037292ptcd17947.425ENSNLEG00000011060-9147.163Nomascus_leucogenys
ENSAMXG00000037292ptcd19646.657ENSMEUG00000006930-8748.967Notamacropus_eugenii
ENSAMXG00000037292ptcd17855.906ENSOPRG00000013647-7655.906Ochotona_princeps
ENSAMXG00000037292ptcd18549.271ENSONIG00000003168ptcd19549.109Oreochromis_niloticus
ENSAMXG00000037292ptcd18946.569ENSOANG00000007728-7646.066Ornithorhynchus_anatinus
ENSAMXG00000037292ptcd18747.293ENSOCUG00000010584-8646.573Oryctolagus_cuniculus
ENSAMXG00000037292ptcd19149.541ENSORLG00000009275ptcd18949.541Oryzias_latipes
ENSAMXG00000037292ptcd19149.235ENSORLG00020000988ptcd18949.235Oryzias_latipes_hni
ENSAMXG00000037292ptcd19149.235ENSORLG00015010557ptcd18949.235Oryzias_latipes_hsok
ENSAMXG00000037292ptcd18950.391ENSOMEG00000020627ptcd18950.078Oryzias_melastigma
ENSAMXG00000037292ptcd18945.975ENSOGAG00000010877-8846.262Otolemur_garnettii
ENSAMXG00000037292ptcd16657.143ENSOARG00000018676-6957.143Ovis_aries
ENSAMXG00000037292ptcd19146.341ENSPPAG00000036024-8746.719Pan_paniscus
ENSAMXG00000037292ptcd19149.005ENSPPRG00000003478-8749.842Panthera_pardus
ENSAMXG00000037292ptcd19146.646ENSPTRG00000019452-8747.031Pan_troglodytes
ENSAMXG00000037292ptcd19146.462ENSPANG00000016730-8946.462Papio_anubis
ENSAMXG00000037292ptcd19552.885ENSPKIG00000014215ptcd18754.724Paramormyrops_kingsleyae
ENSAMXG00000037292ptcd18649.436ENSPSIG00000011184-9949.204Pelodiscus_sinensis
ENSAMXG00000037292ptcd17636.673ENSPMAG00000009667ptcd19937.705Petromyzon_marinus
ENSAMXG00000037292ptcd18748.653ENSPCIG00000024778-8348.653Phascolarctos_cinereus
ENSAMXG00000037292ptcd18750.560ENSPFOG00000004458ptcd18848.792Poecilia_formosa
ENSAMXG00000037292ptcd18650.894ENSPLAG00000011051ptcd18748.926Poecilia_latipinna
ENSAMXG00000037292ptcd18750.560ENSPMEG00000020547ptcd18848.792Poecilia_mexicana
ENSAMXG00000037292ptcd18550.577ENSPREG00000000059ptcd18250.412Poecilia_reticulata
ENSAMXG00000037292ptcd19247.050ENSPPYG00000017377-9447.149Pongo_abelii
ENSAMXG00000037292ptcd17952.239ENSPCAG00000001852-8452.239Procavia_capensis
ENSAMXG00000037292ptcd19046.533ENSPCOG00000018596-8846.759Propithecus_coquereli
ENSAMXG00000037292ptcd15754.138ENSPVAG00000007529-5954.138Pteropus_vampyrus
ENSAMXG00000037292ptcd18750.924ENSPNYG00000019993ptcd18051.882Pundamilia_nyererei
ENSAMXG00000037292ptcd19868.575ENSPNAG00000014931ptcd19968.715Pygocentrus_nattereri
ENSAMXG00000037292ptcd18648.382ENSRNOG00000000987Ptcd18748.243Rattus_norvegicus
ENSAMXG00000037292ptcd18947.344ENSRBIG00000043393-8747.500Rhinopithecus_bieti
ENSAMXG00000037292ptcd18947.582ENSRROG00000036420-8747.738Rhinopithecus_roxellana
ENSAMXG00000037292ptcd18947.738ENSSBOG00000024114-8847.738Saimiri_boliviensis_boliviensis
ENSAMXG00000037292ptcd19845.634ENSSHAG00000011376-9348.362Sarcophilus_harrisii
ENSAMXG00000037292ptcd19352.219ENSSFOG00015007909ptcd18254.702Scleropages_formosus
ENSAMXG00000037292ptcd18650.487ENSSMAG00000000218ptcd19150.325Scophthalmus_maximus
ENSAMXG00000037292ptcd19049.845ENSSDUG00000015671ptcd18451.461Seriola_dumerili
ENSAMXG00000037292ptcd19049.770ENSSLDG00000014261ptcd18650.466Seriola_lalandi_dorsalis
ENSAMXG00000037292ptcd19148.480ENSSPUG00000003540-8748.780Sphenodon_punctatus
ENSAMXG00000037292ptcd19050.772ENSSPAG00000011049ptcd18550.617Stegastes_partitus
ENSAMXG00000037292ptcd18848.195ENSSSCG00000007622-9147.956Sus_scrofa
ENSAMXG00000037292ptcd18852.050ENSTGUG00000007563-9851.587Taeniopygia_guttata
ENSAMXG00000037292ptcd18750.484ENSTRUG00000013471ptcd18150.484Takifugu_rubripes
ENSAMXG00000037292ptcd18849.522ENSTNIG00000008271ptcd18549.522Tetraodon_nigroviridis
ENSAMXG00000037292ptcd19147.147ENSTBEG00000011021-8847.416Tupaia_belangeri
ENSAMXG00000037292ptcd18847.188ENSTTRG00000003006-8747.031Tursiops_truncatus
ENSAMXG00000037292ptcd19447.415ENSUAMG00000008049-8649.289Ursus_americanus
ENSAMXG00000037292ptcd18949.219ENSVVUG00000008836-8849.219Vulpes_vulpes
ENSAMXG00000037292ptcd18946.929ENSXETG00000009891ptcd19146.412Xenopus_tropicalis
ENSAMXG00000037292ptcd18749.679ENSXMAG00000015540ptcd18250.163Xiphophorus_maculatus

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