EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000037447 (Gene tree)
Gene ID: -
Gene Symbol: RNPS1
Alias: wu:fa19a11|zgc:65775
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 11771 bases
Position: chrAPWO02000046.1:5940340-5952110
Accession: 103034929
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000047004	RRM_1	PF00076.22	1.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000043203	RNPS1-201	3708	XM_022665116	ENSAMXP00000047004	324 (aa)	XP_022520837	-

Gene Model

Click here to download ENSAMXG00000037447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000037447's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000037447	RNPS1	75	68.980	ENSG00000205937	RNPS1	66	78.824	Homo_sapiens
ENSAMXG00000037447	RNPS1	75	72.727	ENSANAG00000028802	RNPS1	55	80.342	Aotus_nancymaae
ENSAMXG00000037447	RNPS1	75	68.980	ENSCJAG00000014969	RNPS1	55	80.342	Callithrix_jacchus
ENSAMXG00000037447	RNPS1	75	68.980	ENSTSYG00000001629	RNPS1	55	80.342	Carlito_syrichta
ENSAMXG00000037447	RNPS1	75	72.727	ENSCCAG00000034480	RNPS1	55	80.342	Cebus_capucinus
ENSAMXG00000037447	RNPS1	75	68.980	ENSCATG00000013756	RNPS1	55	80.342	Cercocebus_atys
ENSAMXG00000037447	RNPS1	78	66.008	ENSCATG00000042361	-	57	77.778	Cercocebus_atys
ENSAMXG00000037447	RNPS1	67	49.541	ENSCPBG00000000214	RNPS1	74	50.679	Chrysemys_picta_bellii
ENSAMXG00000037447	RNPS1	75	68.980	ENSCANG00000041307	RNPS1	55	80.342	Colobus_angolensis_palliatus
ENSAMXG00000037447	RNPS1	69	75.336	ENSCVAG00000010868	RNPS1	77	69.333	Cyprinodon_variegatus
ENSAMXG00000037447	RNPS1	73	89.076	ENSDARG00000100188	RNPS1	83	89.076	Danio_rerio
ENSAMXG00000037447	RNPS1	73	89.076	ENSDARG00000116743	rnps1	83	89.076	Danio_rerio
ENSAMXG00000037447	RNPS1	61	57.000	ENSDNOG00000038751	-	98	55.224	Dasypus_novemcinctus
ENSAMXG00000037447	RNPS1	75	68.571	ENSFCAG00000007690	RNPS1	55	80.342	Felis_catus
ENSAMXG00000037447	RNPS1	69	72.646	ENSFHEG00000011705	RNPS1	77	69.778	Fundulus_heteroclitus
ENSAMXG00000037447	RNPS1	75	68.980	ENSGGOG00000014275	RNPS1	55	80.342	Gorilla_gorilla
ENSAMXG00000037447	RNPS1	73	83.613	ENSIPUG00000011746	rnps1	91	85.000	Ictalurus_punctatus
ENSAMXG00000037447	RNPS1	75	68.980	ENSMFAG00000042142	RNPS1	55	80.342	Macaca_fascicularis
ENSAMXG00000037447	RNPS1	76	68.273	ENSMMUG00000041726	-	84	78.632	Macaca_mulatta
ENSAMXG00000037447	RNPS1	64	66.827	ENSMMUG00000019238	-	55	80.342	Macaca_mulatta
ENSAMXG00000037447	RNPS1	76	68.273	ENSMNEG00000024827	-	84	77.778	Macaca_nemestrina
ENSAMXG00000037447	RNPS1	75	68.980	ENSMLEG00000036928	RNPS1	55	80.342	Mandrillus_leucophaeus
ENSAMXG00000037447	RNPS1	73	76.050	ENSMAMG00000021609	-	69	72.596	Mastacembelus_armatus
ENSAMXG00000037447	RNPS1	75	69.388	ENSMICG00000031543	RNPS1	55	80.342	Microcebus_murinus
ENSAMXG00000037447	RNPS1	78	67.717	ENSNLEG00000009243	RNPS1	68	76.033	Nomascus_leucogenys
ENSAMXG00000037447	RNPS1	73	67.647	ENSORLG00000008033	RNPS1	53	82.883	Oryzias_latipes
ENSAMXG00000037447	RNPS1	77	65.339	ENSPPAG00000011845	RNPS1	53	74.359	Pan_paniscus
ENSAMXG00000037447	RNPS1	75	68.571	ENSPPRG00000011255	RNPS1	55	80.342	Panthera_pardus
ENSAMXG00000037447	RNPS1	75	68.571	ENSPTRG00000031310	RNPS1	55	80.342	Pan_troglodytes
ENSAMXG00000037447	RNPS1	75	68.980	ENSPANG00000015748	RNPS1	55	80.342	Papio_anubis
ENSAMXG00000037447	RNPS1	75	69.388	ENSPCOG00000005478	RNPS1	55	80.342	Propithecus_coquereli
ENSAMXG00000037447	RNPS1	75	68.980	ENSRROG00000041252	RNPS1	55	80.342	Rhinopithecus_roxellana
ENSAMXG00000037447	RNPS1	75	68.980	ENSSBOG00000027927	RNPS1	55	80.342	Saimiri_boliviensis_boliviensis