EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMXG00000037464 (Gene tree)
Gene ID
103032763
Gene Symbol
-
Alias
cb127|nhp2l1|nhp2l1b|sb:cb127|zgc:56265
Full Name
small nuclear ribonucleoprotein 13
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Minus strand
Length
3434 bases
Position
chr4:17064152-17067585
Accession
103032763
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000049021Ribosomal_L7AePF01248.269.9e-2511
ENSAMXP00000043648Ribosomal_L7AePF01248.261.2e-2411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000037914-1809XM_007251285ENSAMXP00000049021128 (aa)XP_007251347UPI000440BDF2
ENSAMXT00000047121-1836-ENSAMXP00000043648137 (aa)--
Gene Model
Click here to download ENSAMXG00000037464's gene model file
Pathways
Pathway IDPathway NameSource
amex03008Ribosome biogenesis in eukaryotesKEGG
amex03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000037464's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMXG00000037464-7341.935ENSAMXG00000005845nhp26241.935
ENSAMXG00000037464-10095.312ENSAMXG00000042994SNU1310095.312
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000037464-10087.500ENSG00000100138SNU13100100.000Homo_sapiens
ENSAMXG00000037464-10094.531ENSAPOG00000003295snu13a10094.531Acanthochromis_polyacanthus
ENSAMXG00000037464-9987.402ENSAMEG00000015574SNU1310087.402Ailuropoda_melanoleuca
ENSAMXG00000037464-9896.000ENSACIG00000002273snu13a9896.000Amphilophus_citrinellus
ENSAMXG00000037464-10094.531ENSAOCG00000008378snu13a10094.531Amphiprion_ocellaris
ENSAMXG00000037464-10094.531ENSAPEG00000000691snu13a10094.531Amphiprion_percula
ENSAMXG00000037464-10094.531ENSATEG00000013451snu13a10094.531Anabas_testudineus
ENSAMXG00000037464-6893.103ENSAPLG00000001022SNU1310093.103Anas_platyrhynchos
ENSAMXG00000037464-9683.740ENSACAG00000028496SNU139783.740Anolis_carolinensis
ENSAMXG00000037464-8869.912ENSANAG00000000962-9469.912Aotus_nancymaae
ENSAMXG00000037464-10087.500ENSANAG00000023772-10087.500Aotus_nancymaae
ENSAMXG00000037464-10094.531ENSACLG00000014628snu13a10094.531Astatotilapia_calliptera
ENSAMXG00000037464-10087.500ENSBTAG00000006104SNU1310087.500Bos_taurus
ENSAMXG00000037464-10075.000WBGene00010896M28.510075.000Caenorhabditis_elegans
ENSAMXG00000037464-10087.500ENSCJAG00000043782SNU1310087.500Callithrix_jacchus
ENSAMXG00000037464-10069.767ENSCAFG00000024002-10069.767Canis_familiaris
ENSAMXG00000037464-9987.402ENSCAFG00000001038-10087.500Canis_familiaris
ENSAMXG00000037464-10085.938ENSCAFG00000018660-10085.938Canis_familiaris
ENSAMXG00000037464-10075.781ENSCAFG00020009137-9775.781Canis_lupus_dingo
ENSAMXG00000037464-10085.938ENSCAFG00020001796-9885.938Canis_lupus_dingo
ENSAMXG00000037464-9987.402ENSCAFG00020001539-8887.402Canis_lupus_dingo
ENSAMXG00000037464-7769.388ENSCHIG00000016048-7369.388Capra_hircus
ENSAMXG00000037464-9987.402ENSCHIG00000015834-9887.402Capra_hircus
ENSAMXG00000037464-10085.156ENSCHIG00000013148-10085.156Capra_hircus
ENSAMXG00000037464-10075.194ENSTSYG00000030229-9972.464Carlito_syrichta
ENSAMXG00000037464-10087.500ENSTSYG00000014063-10087.500Carlito_syrichta
ENSAMXG00000037464-9481.818ENSTSYG00000029475-8977.692Carlito_syrichta
ENSAMXG00000037464-9987.402ENSCAPG00000008768SNU1310087.402Cavia_aperea
ENSAMXG00000037464-10087.500ENSCPOG00000040165SNU1310087.500Cavia_porcellus
ENSAMXG00000037464-10087.500ENSCCAG00000031213-10087.500Cebus_capucinus
ENSAMXG00000037464-8865.487ENSCCAG00000022308-9965.487Cebus_capucinus
ENSAMXG00000037464-8881.579ENSCCAG00000032961-7278.400Cebus_capucinus
ENSAMXG00000037464-10087.500ENSCATG00000038628SNU1310087.500Cercocebus_atys
ENSAMXG00000037464-10087.500ENSCLAG00000017182SNU1310087.500Chinchilla_lanigera
ENSAMXG00000037464-10078.462ENSCSAG00000015062-9678.462Chlorocebus_sabaeus
ENSAMXG00000037464-10087.500ENSCSAG00000005776-10087.500Chlorocebus_sabaeus
ENSAMXG00000037464-9987.402ENSCHOG00000004365SNU139787.500Choloepus_hoffmanni
ENSAMXG00000037464-10089.844ENSCPBG00000020533SNU1310089.844Chrysemys_picta_bellii
ENSAMXG00000037464-10079.688ENSCING00000021075-9980.952Ciona_intestinalis
ENSAMXG00000037464-9781.452ENSCSAVG00000010324-9881.452Ciona_savignyi
ENSAMXG00000037464-10087.500ENSCANG00000035243SNU1310087.500Colobus_angolensis_palliatus
ENSAMXG00000037464-10078.906ENSCGRG00001023638-10078.906Cricetulus_griseus_chok1gshd
ENSAMXG00000037464-10087.500ENSCGRG00001019169-10087.500Cricetulus_griseus_chok1gshd
ENSAMXG00000037464-9873.016ENSCGRG00001019632-10073.016Cricetulus_griseus_chok1gshd
ENSAMXG00000037464-10085.938ENSCGRG00000001477-8785.938Cricetulus_griseus_crigri
ENSAMXG00000037464-9574.380ENSCGRG00000007741-10074.380Cricetulus_griseus_crigri
ENSAMXG00000037464-10078.906ENSCGRG00000016499-10078.906Cricetulus_griseus_crigri
ENSAMXG00000037464-9792.742ENSCSEG00000000574snu13a9983.824Cynoglossus_semilaevis
ENSAMXG00000037464-10094.531ENSCVAG00000018526snu13a10094.531Cyprinodon_variegatus
ENSAMXG00000037464-10096.875ENSDARG00000023299snu13b10096.875Danio_rerio
ENSAMXG00000037464-10095.312ENSDARG00000069878snu13a10095.312Danio_rerio
ENSAMXG00000037464-8260.000ENSDNOG00000031711-8360.000Dasypus_novemcinctus
ENSAMXG00000037464-7759.184ENSDNOG00000041762-9859.184Dasypus_novemcinctus
ENSAMXG00000037464-10075.781ENSDNOG00000004146-9875.781Dasypus_novemcinctus
ENSAMXG00000037464-10087.500ENSDNOG00000044768SNU1310087.500Dasypus_novemcinctus
ENSAMXG00000037464-8880.531ENSDORG00000000685-9476.562Dipodomys_ordii
ENSAMXG00000037464-10087.500ENSDORG00000027409-10087.500Dipodomys_ordii
ENSAMXG00000037464-10075.781FBgn0015393hoip10075.781Drosophila_melanogaster
ENSAMXG00000037464-6794.186ENSETEG00000015335SNU1310094.186Echinops_telfairi
ENSAMXG00000037464-9785.484ENSEBUG00000004806snu13a9685.484Eptatretus_burgeri
ENSAMXG00000037464-9987.402ENSEASG00005001509SNU139386.719Equus_asinus_asinus
ENSAMXG00000037464-9865.873ENSEASG00005013854-9365.873Equus_asinus_asinus
ENSAMXG00000037464-9987.402ENSECAG00000000375SNU139386.719Equus_caballus
ENSAMXG00000037464-9866.667ENSECAG00000035938-9366.667Equus_caballus
ENSAMXG00000037464-10096.094ENSELUG00000000695NH2L110096.094Esox_lucius
ENSAMXG00000037464-10094.531ENSELUG00000005342NH2L110094.531Esox_lucius
ENSAMXG00000037464-10087.500ENSFCAG00000027664-10087.500Felis_catus
ENSAMXG00000037464-9364.706ENSFCAG00000034906-8964.706Felis_catus
ENSAMXG00000037464-10090.625ENSFALG00000011879SNU1310090.625Ficedula_albicollis
ENSAMXG00000037464-10087.500ENSFDAG00000018749SNU1310087.500Fukomys_damarensis
ENSAMXG00000037464-10094.531ENSFHEG00000006641snu13a10094.531Fundulus_heteroclitus
ENSAMXG00000037464-10092.188ENSGMOG00000002685snu13a10092.188Gadus_morhua
ENSAMXG00000037464-10090.625ENSGALG00000011931SNU1310090.625Gallus_gallus
ENSAMXG00000037464-10094.531ENSGAFG00000012218snu13a10094.531Gambusia_affinis
ENSAMXG00000037464-10095.312ENSGACG00000009568snu13a10095.312Gasterosteus_aculeatus
ENSAMXG00000037464-10089.844ENSGAGG00000017521SNU1310089.844Gopherus_agassizii
ENSAMXG00000037464-10087.500ENSGGOG00000015898SNU1310087.500Gorilla_gorilla
ENSAMXG00000037464-10094.531ENSHBUG00000021745snu13a10094.531Haplochromis_burtoni
ENSAMXG00000037464-10087.500ENSHGLG00000018808NHP2L110087.500Heterocephalus_glaber_female
ENSAMXG00000037464-10087.500ENSHGLG00100012900NHP2L110087.500Heterocephalus_glaber_male
ENSAMXG00000037464-10094.531ENSHCOG00000013902snu13a10094.531Hippocampus_comes
ENSAMXG00000037464-10097.656ENSIPUG00000006267nh2l110097.656Ictalurus_punctatus
ENSAMXG00000037464-10095.312ENSIPUG00000002874SNU1310095.312Ictalurus_punctatus
ENSAMXG00000037464-10087.500ENSSTOG00000009514SNU1310087.500Ictidomys_tridecemlineatus
ENSAMXG00000037464-7187.912ENSSTOG00000020182-9875.410Ictidomys_tridecemlineatus
ENSAMXG00000037464-9167.241ENSJJAG00000005112-9867.241Jaculus_jaculus
ENSAMXG00000037464-10087.500ENSJJAG00000014378Snu1310087.500Jaculus_jaculus
ENSAMXG00000037464-9266.102ENSJJAG00000018137-9666.102Jaculus_jaculus
ENSAMXG00000037464-10095.312ENSKMAG00000008847snu13a10095.312Kryptolebias_marmoratus
ENSAMXG00000037464-10094.531ENSLBEG00000009562snu13a10094.531Labrus_bergylta
ENSAMXG00000037464-9893.651ENSLACG00000008587SNU139393.651Latimeria_chalumnae
ENSAMXG00000037464-9993.701ENSLOCG00000008147snu13a10093.750Lepisosteus_oculatus
ENSAMXG00000037464-10086.719ENSLOCG00000017988-10086.719Lepisosteus_oculatus
ENSAMXG00000037464-9987.402ENSLAFG00000011026SNU1310087.402Loxodonta_africana
ENSAMXG00000037464-10087.500ENSMFAG00000031096SNU1310087.500Macaca_fascicularis
ENSAMXG00000037464-10087.500ENSMMUG00000042546SNU1310087.500Macaca_mulatta
ENSAMXG00000037464-10087.500ENSMNEG00000043738-10083.824Macaca_nemestrina
ENSAMXG00000037464-10087.500ENSMNEG00000033195-8187.500Macaca_nemestrina
ENSAMXG00000037464-10087.500ENSMLEG00000042136SNU1310087.500Mandrillus_leucophaeus
ENSAMXG00000037464-9696.748ENSMAMG00000007380snu13a9896.748Mastacembelus_armatus
ENSAMXG00000037464-10094.531ENSMZEG00005008935snu13a10094.531Maylandia_zebra
ENSAMXG00000037464-9990.551ENSMGAG00000012155SNU1310090.551Meleagris_gallopavo
ENSAMXG00000037464-9987.402ENSMAUG00000010871Snu1310087.402Mesocricetus_auratus
ENSAMXG00000037464-10086.719ENSMICG00000013557SNU1310086.719Microcebus_murinus
ENSAMXG00000037464-9786.290ENSMOCG00000017907-9886.290Microtus_ochrogaster
ENSAMXG00000037464-10085.156ENSMOCG00000001499-10085.156Microtus_ochrogaster
ENSAMXG00000037464-10080.469ENSMOCG00000008269-10080.469Microtus_ochrogaster
ENSAMXG00000037464-10094.531ENSMMOG00000002764snu13a10094.531Mola_mola
ENSAMXG00000037464-9989.764ENSMODG00000016592SNU1310089.844Monodelphis_domestica
ENSAMXG00000037464-10095.312ENSMALG00000016710snu13a10095.312Monopterus_albus
ENSAMXG00000037464-8480.556MGP_CAROLIEiJ_G0023195-6780.556Mus_caroli
ENSAMXG00000037464-10087.500MGP_CAROLIEiJ_G0020069Snu1310087.500Mus_caroli
ENSAMXG00000037464-10087.500ENSMUSG00000063480Snu1310087.500Mus_musculus
ENSAMXG00000037464-5790.411MGP_PahariEiJ_G0029935-10090.411Mus_pahari
ENSAMXG00000037464-10083.721MGP_SPRETEiJ_G0024567-10083.721Mus_spretus
ENSAMXG00000037464-9987.402ENSMPUG00000016384SNU1310087.402Mustela_putorius_furo
ENSAMXG00000037464-9987.402ENSMLUG00000002526SNU1310087.402Myotis_lucifugus
ENSAMXG00000037464-8876.991ENSNGAG00000012782-10076.991Nannospalax_galili
ENSAMXG00000037464-10079.688ENSNGAG00000014765-10079.688Nannospalax_galili
ENSAMXG00000037464-9579.675ENSNGAG00000023165-9879.675Nannospalax_galili
ENSAMXG00000037464-10087.500ENSNGAG00000012960Snu1310087.500Nannospalax_galili
ENSAMXG00000037464-10080.469ENSNGAG00000013538-10080.469Nannospalax_galili
ENSAMXG00000037464-10094.531ENSNBRG00000021108snu13a10094.531Neolamprologus_brichardi
ENSAMXG00000037464-10087.500ENSNLEG00000027284SNU1310087.500Nomascus_leucogenys
ENSAMXG00000037464-10087.500ENSOPRG00000002422SNU1310087.500Ochotona_princeps
ENSAMXG00000037464-10064.062ENSODEG00000001681-10064.062Octodon_degus
ENSAMXG00000037464-10087.500ENSODEG00000015632-10087.500Octodon_degus
ENSAMXG00000037464-9994.488ENSONIG00000019849snu13a10094.531Oreochromis_niloticus
ENSAMXG00000037464-9989.764ENSOANG00000011327SNU1310089.764Ornithorhynchus_anatinus
ENSAMXG00000037464-10087.500ENSOCUG00000023785SNU1310087.500Oryctolagus_cuniculus
ENSAMXG00000037464-9764.516ENSOCUG00000013335-9864.516Oryctolagus_cuniculus
ENSAMXG00000037464-10096.094ENSORLG00000022503snu13a10096.094Oryzias_latipes
ENSAMXG00000037464-10096.094ENSORLG00020000712snu13a10096.094Oryzias_latipes_hni
ENSAMXG00000037464-10095.312ENSORLG00015020334snu13a10095.312Oryzias_latipes_hsok
ENSAMXG00000037464-10094.531ENSOMEG00000006161snu13a10094.531Oryzias_melastigma
ENSAMXG00000037464-9986.614ENSOGAG00000004007SNU1310086.614Otolemur_garnettii
ENSAMXG00000037464-10085.938ENSOARG00000019697-10085.938Ovis_aries
ENSAMXG00000037464-9986.614ENSOARG00000018451-10086.719Ovis_aries
ENSAMXG00000037464-10087.500ENSPPAG00000026299SNU1310087.500Pan_paniscus
ENSAMXG00000037464-10087.500ENSPPRG00000004114-10087.500Panthera_pardus
ENSAMXG00000037464-9365.546ENSPPRG00000015212-8965.546Panthera_pardus
ENSAMXG00000037464-10087.500ENSPTIG00000021078SNU1310087.500Panthera_tigris_altaica
ENSAMXG00000037464-10087.500ENSPTRG00000014435SNU1310087.500Pan_troglodytes
ENSAMXG00000037464-10087.500ENSPTRG00000052851SNU1310087.500Pan_troglodytes
ENSAMXG00000037464-10087.500ENSPANG00000029559SNU1310087.500Papio_anubis
ENSAMXG00000037464-10093.750ENSPKIG00000015329snu13a10093.750Paramormyrops_kingsleyae
ENSAMXG00000037464-10094.531ENSPKIG00000008062snu13b10094.531Paramormyrops_kingsleyae
ENSAMXG00000037464-10089.844ENSPSIG00000016422SNU1310089.844Pelodiscus_sinensis
ENSAMXG00000037464-9992.913ENSPMGG00000004121snu13a9892.913Periophthalmus_magnuspinnatus
ENSAMXG00000037464-9482.500ENSPEMG00000018900-10082.500Peromyscus_maniculatus_bairdii
ENSAMXG00000037464-9690.244ENSPCIG00000026408SNU139890.244Phascolarctos_cinereus
ENSAMXG00000037464-10094.531ENSPFOG00000015290snu13a10094.531Poecilia_formosa
ENSAMXG00000037464-10094.531ENSPLAG00000022694snu13a10094.531Poecilia_latipinna
ENSAMXG00000037464-10094.531ENSPMEG00000022654snu13a10094.531Poecilia_mexicana
ENSAMXG00000037464-10094.531ENSPREG00000020035snu13a10094.531Poecilia_reticulata
ENSAMXG00000037464-10087.500ENSPPYG00000011877SNU1310087.500Pongo_abelii
ENSAMXG00000037464-10085.156ENSPCOG00000003775-10085.156Propithecus_coquereli
ENSAMXG00000037464-10086.719ENSPCOG00000025033-10086.719Propithecus_coquereli
ENSAMXG00000037464-9987.402ENSPVAG00000001171SNU139787.500Pteropus_vampyrus
ENSAMXG00000037464-10094.531ENSPNYG00000019585snu13a10094.531Pundamilia_nyererei
ENSAMXG00000037464-9855.970ENSPNAG00000003196-10055.970Pygocentrus_nattereri
ENSAMXG00000037464-10095.312ENSPNAG00000016342-10095.312Pygocentrus_nattereri
ENSAMXG00000037464-10084.375ENSRNOG00000005681AABR07042323.110084.375Rattus_norvegicus
ENSAMXG00000037464-10087.500ENSRNOG00000025154LOC10035957410087.500Rattus_norvegicus
ENSAMXG00000037464-10087.500ENSRNOG00000006762Snu1310087.500Rattus_norvegicus
ENSAMXG00000037464-10087.500ENSRBIG00000024209SNU1310087.500Rhinopithecus_bieti
ENSAMXG00000037464-10087.500ENSRROG00000042542SNU1310087.500Rhinopithecus_roxellana
ENSAMXG00000037464-9571.311YEL026W-9771.311Saccharomyces_cerevisiae
ENSAMXG00000037464-10078.125ENSSBOG00000021071-9479.839Saimiri_boliviensis_boliviensis
ENSAMXG00000037464-10087.500ENSSBOG00000024134-10087.500Saimiri_boliviensis_boliviensis
ENSAMXG00000037464-9977.953ENSSBOG00000030745-9777.344Saimiri_boliviensis_boliviensis
ENSAMXG00000037464-9989.764ENSSHAG00000010895SNU1310089.844Sarcophilus_harrisii
ENSAMXG00000037464-10093.750ENSSFOG00015022251snu1310093.750Scleropages_formosus
ENSAMXG00000037464-10092.969ENSSMAG00000010425snu13a10092.969Scophthalmus_maximus
ENSAMXG00000037464-10093.750ENSSDUG00000004460snu13a10093.750Seriola_dumerili
ENSAMXG00000037464-10093.750ENSSLDG00000003525snu13a10093.750Seriola_lalandi_dorsalis
ENSAMXG00000037464-10086.719ENSSARG00000008036SNU1310086.719Sorex_araneus
ENSAMXG00000037464-10088.281ENSSPUG00000012098SNU139888.976Sphenodon_punctatus
ENSAMXG00000037464-10094.531ENSSPAG00000018586snu13a10094.531Stegastes_partitus
ENSAMXG00000037464-10085.938ENSSSCG00000036272-10085.938Sus_scrofa
ENSAMXG00000037464-10084.375ENSSSCG00000036849-10084.375Sus_scrofa
ENSAMXG00000037464-10087.500ENSSSCG00000000058SNU1310089.344Sus_scrofa
ENSAMXG00000037464-9990.551ENSTGUG00000009845-10090.551Taeniopygia_guttata
ENSAMXG00000037464-9990.551ENSTGUG00000013855SNU1310090.551Taeniopygia_guttata
ENSAMXG00000037464-9893.651ENSTRUG00000016758snu13a8393.651Takifugu_rubripes
ENSAMXG00000037464-9993.701ENSTNIG00000012873snu13a10093.701Tetraodon_nigroviridis
ENSAMXG00000037464-9987.402ENSTBEG00000010768-10087.402Tupaia_belangeri
ENSAMXG00000037464-10087.500ENSUAMG00000003470-10087.500Ursus_americanus
ENSAMXG00000037464-9666.400ENSUAMG00000016556-7766.400Ursus_americanus
ENSAMXG00000037464-9667.200ENSUMAG00000015044-7767.200Ursus_maritimus
ENSAMXG00000037464-10087.500ENSUMAG00000021000-10087.500Ursus_maritimus
ENSAMXG00000037464-9987.402ENSVPAG00000002620SNU1310087.402Vicugna_pacos
ENSAMXG00000037464-10085.938ENSVVUG00000006017-10085.938Vulpes_vulpes
ENSAMXG00000037464-9987.402ENSVVUG00000003430-8887.402Vulpes_vulpes
ENSAMXG00000037464-10089.062ENSXETG00000026024snu1310089.062Xenopus_tropicalis
ENSAMXG00000037464-10093.750ENSXCOG00000009018snu13a9894.488Xiphophorus_couchianus

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