EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000037575 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 3234 bases
Position: chrAPWO02000306.1:95064-98297
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000050719	RVT_1	PF00078.27	1.8e-40	1	1
ENSAMXP00000050719	Exo_endo_phos	PF03372.23	6.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000048507	-	3234	-	ENSAMXP00000050719	1078 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000037575's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000037575's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000037575	-	98	43.188	ENSATEG00000021554	-	82	42.778	Anabas_testudineus
ENSAMXG00000037575	-	97	41.849	ENSDARG00000098779	BX547930.4	80	41.659	Danio_rerio
ENSAMXG00000037575	-	98	47.097	ENSDARG00000100303	CU638714.1	80	46.954	Danio_rerio
ENSAMXG00000037575	-	97	42.395	ENSDARG00000105157	BX649434.3	79	42.395	Danio_rerio
ENSAMXG00000037575	-	98	42.830	ENSDARG00000101795	CABZ01033394.1	80	42.830	Danio_rerio
ENSAMXG00000037575	-	99	39.963	ENSGMOG00000001470	-	82	40.149	Gadus_morhua
ENSAMXG00000037575	-	98	42.081	ENSGACG00000000122	-	80	41.760	Gasterosteus_aculeatus
ENSAMXG00000037575	-	81	44.154	ENSKMAG00000017599	-	99	44.218	Kryptolebias_marmoratus
ENSAMXG00000037575	-	80	42.644	ENSLBEG00000008622	-	88	42.497	Labrus_bergylta
ENSAMXG00000037575	-	71	48.701	ENSLBEG00000022930	-	93	48.765	Labrus_bergylta
ENSAMXG00000037575	-	98	47.862	ENSLBEG00000007872	-	81	47.862	Labrus_bergylta
ENSAMXG00000037575	-	98	48.141	ENSLBEG00000007968	-	81	48.141	Labrus_bergylta
ENSAMXG00000037575	-	95	41.051	ENSLBEG00000029018	-	90	41.051	Labrus_bergylta
ENSAMXG00000037575	-	98	48.141	ENSLBEG00000008483	-	81	48.141	Labrus_bergylta
ENSAMXG00000037575	-	98	48.141	ENSLBEG00000012182	-	81	48.141	Labrus_bergylta
ENSAMXG00000037575	-	94	49.263	ENSLBEG00000008569	-	99	49.312	Labrus_bergylta
ENSAMXG00000037575	-	97	48.868	ENSORLG00000024845	-	81	48.835	Oryzias_latipes
ENSAMXG00000037575	-	77	44.096	ENSORLG00000024114	-	76	43.596	Oryzias_latipes
ENSAMXG00000037575	-	97	48.347	ENSORLG00020022348	-	81	48.321	Oryzias_latipes_hni
ENSAMXG00000037575	-	99	47.615	ENSOMEG00000013951	-	80	47.615	Oryzias_melastigma
ENSAMXG00000037575	-	97	41.452	ENSSDUG00000006191	-	80	41.452	Seriola_dumerili
ENSAMXG00000037575	-	96	42.871	ENSXMAG00000028545	-	80	42.415	Xiphophorus_maculatus
ENSAMXG00000037575	-	98	40.112	ENSXMAG00000024932	-	80	40.112	Xiphophorus_maculatus
ENSAMXG00000037575	-	96	43.474	ENSXMAG00000028372	-	80	43.474	Xiphophorus_maculatus
ENSAMXG00000037575	-	98	40.112	ENSXMAG00000025449	-	80	40.112	Xiphophorus_maculatus