EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000037578 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162396 (1 of many)
Alias: fb62c07|si:ch211-31o18.2|wu:fb62c07
Full Name: zgc:162396
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 4409 bases
Position: chr19:26671828-26676236
Accession: ZDB-GENE-030131-1190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000050456	Methyltransf_31	PF13847.6	3.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000031030	-	756	-	ENSAMXP00000050456	251 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000037578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000037578's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000037578	zgc:162396	98	72.266	ENSAMXG00000030552	zgc:162396	94	72.266
ENSAMXG00000037578	zgc:162396	92	35.714	ENSAMXG00000040257	zgc:162780	84	36.207

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000037578	zgc:162396	98	51.737	ENSAPOG00000015421	zgc:162396	94	50.575	Acanthochromis_polyacanthus
ENSAMXG00000037578	zgc:162396	93	52.743	ENSACIG00000015427	zgc:162396	86	52.321	Amphilophus_citrinellus
ENSAMXG00000037578	zgc:162396	98	52.124	ENSAOCG00000004131	zgc:162396	94	50.958	Amphiprion_ocellaris
ENSAMXG00000037578	zgc:162396	98	51.737	ENSAPEG00000008189	zgc:162396	94	50.575	Amphiprion_percula
ENSAMXG00000037578	zgc:162396	97	50.195	ENSATEG00000011813	zgc:162396	93	48.659	Anabas_testudineus
ENSAMXG00000037578	zgc:162396	96	39.683	ENSAPLG00000012593	-	93	40.079	Anas_platyrhynchos
ENSAMXG00000037578	zgc:162396	93	54.430	ENSACLG00000006906	zgc:162396	86	52.720	Astatotilapia_calliptera
ENSAMXG00000037578	zgc:162396	97	44.737	ENSCPBG00000002804	-	90	43.363	Chrysemys_picta_bellii
ENSAMXG00000037578	zgc:162396	92	53.975	ENSCVAG00000021429	zgc:162396	86	53.846	Cyprinodon_variegatus
ENSAMXG00000037578	zgc:162396	99	53.488	ENSDARG00000069549	zgc:162396	99	56.522	Danio_rerio
ENSAMXG00000037578	zgc:162396	97	57.647	ENSELUG00000005372	zgc:162396	93	56.522	Esox_lucius
ENSAMXG00000037578	zgc:162396	93	42.017	ENSFALG00000012826	-	86	42.308	Ficedula_albicollis
ENSAMXG00000037578	zgc:162396	92	55.274	ENSFHEG00000005224	-	96	55.556	Fundulus_heteroclitus
ENSAMXG00000037578	zgc:162396	90	40.693	ENSGALG00000047535	-	84	40.969	Gallus_gallus
ENSAMXG00000037578	zgc:162396	90	40.693	ENSGALG00000050548	-	84	40.969	Gallus_gallus
ENSAMXG00000037578	zgc:162396	90	40.693	ENSGALG00000042073	-	84	40.969	Gallus_gallus
ENSAMXG00000037578	zgc:162396	93	53.165	ENSGAFG00000018387	-	86	52.301	Gambusia_affinis
ENSAMXG00000037578	zgc:162396	97	53.125	ENSGACG00000002200	zgc:162396	90	52.756	Gasterosteus_aculeatus
ENSAMXG00000037578	zgc:162396	93	54.008	ENSHBUG00000017584	zgc:162396	86	52.301	Haplochromis_burtoni
ENSAMXG00000037578	zgc:162396	98	61.328	ENSIPUG00000001159	zgc:162396	95	60.853	Ictalurus_punctatus
ENSAMXG00000037578	zgc:162396	97	60.938	ENSIPUG00000001171	-	94	60.938	Ictalurus_punctatus
ENSAMXG00000037578	zgc:162396	97	60.938	ENSIPUG00000001213	-	94	60.938	Ictalurus_punctatus
ENSAMXG00000037578	zgc:162396	97	50.584	ENSKMAG00000018426	-	93	50.787	Kryptolebias_marmoratus
ENSAMXG00000037578	zgc:162396	97	51.751	ENSLBEG00000026502	zgc:162396	94	51.373	Labrus_bergylta
ENSAMXG00000037578	zgc:162396	97	42.745	ENSLACG00000009261	-	94	41.473	Latimeria_chalumnae
ENSAMXG00000037578	zgc:162396	99	51.724	ENSMAMG00000013213	zgc:162396	95	51.341	Mastacembelus_armatus
ENSAMXG00000037578	zgc:162396	93	54.430	ENSMZEG00005000798	zgc:162396	86	52.720	Maylandia_zebra
ENSAMXG00000037578	zgc:162396	90	40.517	ENSMGAG00000003269	-	84	40.000	Meleagris_gallopavo
ENSAMXG00000037578	zgc:162396	97	46.063	ENSMMOG00000005445	zgc:162396	93	46.063	Mola_mola
ENSAMXG00000037578	zgc:162396	93	54.008	ENSNBRG00000014954	zgc:162396	86	52.766	Neolamprologus_brichardi
ENSAMXG00000037578	zgc:162396	93	54.430	ENSONIG00000004463	zgc:162396	86	53.191	Oreochromis_niloticus
ENSAMXG00000037578	zgc:162396	98	41.406	ENSOANG00000021828	-	92	41.406	Ornithorhynchus_anatinus
ENSAMXG00000037578	zgc:162396	69	37.853	ENSOANG00000015675	-	99	37.143	Ornithorhynchus_anatinus
ENSAMXG00000037578	zgc:162396	92	54.701	ENSORLG00015008543	zgc:162396	86	54.701	Oryzias_latipes_hsok
ENSAMXG00000037578	zgc:162396	97	51.575	ENSOMEG00000010640	zgc:162396	86	54.701	Oryzias_melastigma
ENSAMXG00000037578	zgc:162396	97	55.642	ENSPKIG00000014798	zgc:162396	99	57.203	Paramormyrops_kingsleyae
ENSAMXG00000037578	zgc:162396	97	40.234	ENSPSIG00000016701	-	94	38.976	Pelodiscus_sinensis
ENSAMXG00000037578	zgc:162396	79	34.673	ENSPMAG00000003743	zgc:162396	86	35.071	Petromyzon_marinus
ENSAMXG00000037578	zgc:162396	79	37.688	ENSPMAG00000006166	zgc:162396	100	37.688	Petromyzon_marinus
ENSAMXG00000037578	zgc:162396	90	34.956	ENSPMAG00000004744	zgc:162396	98	34.956	Petromyzon_marinus
ENSAMXG00000037578	zgc:162396	93	52.500	ENSPFOG00000002666	zgc:162396	86	52.766	Poecilia_formosa
ENSAMXG00000037578	zgc:162396	93	52.917	ENSPLAG00000010281	zgc:162396	86	53.191	Poecilia_latipinna
ENSAMXG00000037578	zgc:162396	93	52.500	ENSPMEG00000002349	zgc:162396	86	52.766	Poecilia_mexicana
ENSAMXG00000037578	zgc:162396	93	53.333	ENSPREG00000016491	zgc:162396	86	53.556	Poecilia_reticulata
ENSAMXG00000037578	zgc:162396	93	54.008	ENSPNYG00000009858	zgc:162396	86	52.301	Pundamilia_nyererei
ENSAMXG00000037578	zgc:162396	98	64.314	ENSPNAG00000004920	zgc:162396	94	64.314	Pygocentrus_nattereri
ENSAMXG00000037578	zgc:162396	93	64.407	ENSPNAG00000026074	zgc:162396	86	63.675	Pygocentrus_nattereri
ENSAMXG00000037578	zgc:162396	93	30.579	ENSSHAG00000000950	-	86	30.165	Sarcophilus_harrisii
ENSAMXG00000037578	zgc:162396	97	56.471	ENSSFOG00015023503	zgc:162396	93	56.522	Scleropages_formosus
ENSAMXG00000037578	zgc:162396	97	56.693	ENSSFOG00015023495	zgc:162396	94	56.693	Scleropages_formosus
ENSAMXG00000037578	zgc:162396	98	50.965	ENSSMAG00000004484	zgc:162396	95	49.421	Scophthalmus_maximus
ENSAMXG00000037578	zgc:162396	97	53.696	ENSSDUG00000010278	zgc:162396	94	52.549	Seriola_dumerili
ENSAMXG00000037578	zgc:162396	97	53.696	ENSSLDG00000021423	zgc:162396	94	52.549	Seriola_lalandi_dorsalis
ENSAMXG00000037578	zgc:162396	93	42.373	ENSSPUG00000015532	-	73	41.949	Sphenodon_punctatus
ENSAMXG00000037578	zgc:162396	99	50.579	ENSSPAG00000005505	zgc:162396	95	50.579	Stegastes_partitus
ENSAMXG00000037578	zgc:162396	69	41.899	ENSTGUG00000015044	-	94	42.286	Taeniopygia_guttata
ENSAMXG00000037578	zgc:162396	93	42.857	ENSTGUG00000003861	-	87	43.162	Taeniopygia_guttata
ENSAMXG00000037578	zgc:162396	97	50.391	ENSTRUG00000007506	zgc:162396	94	48.819	Takifugu_rubripes
ENSAMXG00000037578	zgc:162396	98	45.560	ENSTRUG00000010648	-	94	44.061	Takifugu_rubripes
ENSAMXG00000037578	zgc:162396	97	49.805	ENSTNIG00000001485	zgc:162396	94	48.627	Tetraodon_nigroviridis
ENSAMXG00000037578	zgc:162396	92	36.957	ENSXETG00000033236	-	80	36.957	Xenopus_tropicalis
ENSAMXG00000037578	zgc:162396	93	53.333	ENSXCOG00000014529	zgc:162396	86	53.556	Xiphophorus_couchianus
ENSAMXG00000037578	zgc:162396	93	53.333	ENSXMAG00000023129	zgc:162396	86	53.556	Xiphophorus_maculatus