EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000037623 (Gene tree)
Gene ID: 103047600
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-11B
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 9032 bases
Position: chr5:12397946-12406977
Accession: 103047600
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000032209	MMR_HSR1	PF01926.23	3.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000055778	-	4075	XM_007252648	ENSAMXP00000032209	218 (aa)	XP_007252710	W5L9J4

Gene Model

Click here to download ENSAMXG00000037623's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000037623's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000037623	-	72	36.306	ENSAMXG00000040611	rabl2	69	36.306
ENSAMXG00000037623	-	74	31.792	ENSAMXG00000035770	rasl11a	68	31.792
ENSAMXG00000037623	-	74	32.941	ENSAMXG00000033069	si:cabz01085950.1	82	32.941
ENSAMXG00000037623	-	70	34.839	ENSAMXG00000017217	kras	87	35.928
ENSAMXG00000037623	-	76	46.988	ENSAMXG00000030712	rab13	82	46.988
ENSAMXG00000037623	-	75	48.466	ENSAMXG00000043717	rab5c	88	42.105
ENSAMXG00000037623	-	77	35.632	ENSAMXG00000037428	-	82	35.632
ENSAMXG00000037623	-	81	39.267	ENSAMXG00000040286	rab33ba	80	39.267
ENSAMXG00000037623	-	81	46.591	ENSAMXG00000040604	-	91	45.109
ENSAMXG00000037623	-	80	51.724	ENSAMXG00000009640	rab14	81	51.724
ENSAMXG00000037623	-	94	37.619	ENSAMXG00000025889	RAB9A	97	37.619
ENSAMXG00000037623	-	95	38.756	ENSAMXG00000032729	rab42a	98	38.756
ENSAMXG00000037623	-	86	43.850	ENSAMXG00000009935	rab30	75	43.850
ENSAMXG00000037623	-	75	48.466	ENSAMXG00000037267	-	77	48.466
ENSAMXG00000037623	-	99	63.134	ENSAMXG00000040879	rab25a	99	63.134
ENSAMXG00000037623	-	88	30.769	ENSAMXG00000006018	rab34b	79	32.524
ENSAMXG00000037623	-	81	38.462	ENSAMXG00000026059	RAB9A	87	38.462
ENSAMXG00000037623	-	78	42.941	ENSAMXG00000039737	RAB19	78	42.941
ENSAMXG00000037623	-	70	34.641	ENSAMXG00000010334	rras	81	35.758
ENSAMXG00000037623	-	70	39.490	ENSAMXG00000017266	rab36	60	39.490
ENSAMXG00000037623	-	72	40.491	ENSAMXG00000031957	zgc:100918	79	40.491
ENSAMXG00000037623	-	75	34.118	ENSAMXG00000036330	RAB38	79	34.118
ENSAMXG00000037623	-	74	34.146	ENSAMXG00000033764	si:ch73-116o1.2	82	35.795
ENSAMXG00000037623	-	96	46.411	ENSAMXG00000032564	rab1ab	99	46.411
ENSAMXG00000037623	-	70	35.948	ENSAMXG00000033216	rab41	78	35.948
ENSAMXG00000037623	-	94	76.471	ENSAMXG00000024632	rab11al	92	76.471
ENSAMXG00000037623	-	70	32.468	ENSAMXG00000033390	rap1aa	78	32.468
ENSAMXG00000037623	-	78	46.784	ENSAMXG00000042073	rab18b	83	46.784
ENSAMXG00000037623	-	66	34.028	ENSAMXG00000029130	-	77	34.028
ENSAMXG00000037623	-	94	42.233	ENSAMXG00000035919	rab5ab	90	42.233
ENSAMXG00000037623	-	78	39.884	ENSAMXG00000040460	zgc:101559	71	39.884
ENSAMXG00000037623	-	80	44.828	ENSAMXG00000038243	si:dkey-16l2.16	98	41.148
ENSAMXG00000037623	-	75	44.848	ENSAMXG00000004882	rab12	83	38.889
ENSAMXG00000037623	-	70	35.032	ENSAMXG00000043003	rab34a	60	35.032
ENSAMXG00000037623	-	100	97.248	ENSAMXG00000042655	rab11bb	100	97.248
ENSAMXG00000037623	-	73	36.875	ENSAMXG00000014960	rab23	79	35.583
ENSAMXG00000037623	-	72	39.877	ENSAMXG00000032027	rab7a	78	39.877
ENSAMXG00000037623	-	97	44.393	ENSAMXG00000039486	zgc:171927	99	44.393
ENSAMXG00000037623	-	68	35.333	ENSAMXG00000033907	hrasb	85	36.420
ENSAMXG00000037623	-	74	38.953	ENSAMXG00000034227	rab32b	81	38.953
ENSAMXG00000037623	-	74	43.827	ENSAMXG00000043951	rab15	77	43.827
ENSAMXG00000037623	-	94	42.233	ENSAMXG00000036179	rab5aa	90	42.233
ENSAMXG00000037623	-	68	35.333	ENSAMXG00000035885	hrasa	85	36.420
ENSAMXG00000037623	-	74	33.537	ENSAMXG00000010919	mras	82	35.227
ENSAMXG00000037623	-	100	64.384	ENSAMXG00000029712	rab25b	100	64.384
ENSAMXG00000037623	-	65	34.965	ENSAMXG00000003504	rab20	57	34.722
ENSAMXG00000037623	-	74	43.478	ENSAMXG00000013054	rab22a	82	43.478
ENSAMXG00000037623	-	88	33.679	ENSAMXG00000032547	rab6a	88	33.679
ENSAMXG00000037623	-	75	35.583	ENSAMXG00000004630	rab6ba	86	35.583
ENSAMXG00000037623	-	71	38.509	ENSAMXG00000032663	si:dkey-13a21.4	74	38.509
ENSAMXG00000037623	-	79	46.552	ENSAMXG00000003717	rab39bb	82	46.552
ENSAMXG00000037623	-	80	52.299	ENSAMXG00000040126	-	64	52.299
ENSAMXG00000037623	-	78	41.477	ENSAMXG00000026476	rab9b	77	41.477
ENSAMXG00000037623	-	92	38.500	ENSAMXG00000042419	rab3c	92	38.500
ENSAMXG00000037623	-	77	38.953	ENSAMXG00000002254	-	80	38.953
ENSAMXG00000037623	-	79	46.552	ENSAMXG00000041657	rab39ba	82	46.552
ENSAMXG00000037623	-	92	92.000	ENSAMXG00000003155	rab11a	93	92.000
ENSAMXG00000037623	-	64	30.556	ENSAMXG00000025423	arl4ab	73	30.556
ENSAMXG00000037623	-	70	35.484	ENSAMXG00000012327	nras	92	36.527
ENSAMXG00000037623	-	76	45.181	ENSAMXG00000033470	RAB15	78	45.181
ENSAMXG00000037623	-	81	47.159	ENSAMXG00000039865	rab35b	94	45.078
ENSAMXG00000037623	-	78	54.971	ENSAMXG00000036772	rab2a	81	54.971
ENSAMXG00000037623	-	77	52.381	ENSAMXG00000003547	rab1ba	76	52.381
ENSAMXG00000037623	-	96	45.455	ENSAMXG00000034850	-	99	45.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000037623	-	100	96.789	ENSAPOG00000023455	rab11bb	100	96.789	Acanthochromis_polyacanthus
ENSAMXG00000037623	-	100	84.404	ENSACIG00000019631	rab11bb	100	84.404	Amphilophus_citrinellus
ENSAMXG00000037623	-	100	96.789	ENSACIG00000024376	-	100	96.789	Amphilophus_citrinellus
ENSAMXG00000037623	-	100	96.789	ENSAOCG00000018849	-	100	96.789	Amphiprion_ocellaris
ENSAMXG00000037623	-	100	96.789	ENSAOCG00000018239	rab11bb	100	96.789	Amphiprion_ocellaris
ENSAMXG00000037623	-	100	96.789	ENSAPEG00000016590	rab11bb	100	96.789	Amphiprion_percula
ENSAMXG00000037623	-	100	96.330	ENSATEG00000023725	-	100	96.330	Anabas_testudineus
ENSAMXG00000037623	-	100	96.789	ENSATEG00000017696	rab11bb	100	96.789	Anabas_testudineus
ENSAMXG00000037623	-	96	96.651	ENSAPLG00000011046	-	96	96.651	Anas_platyrhynchos
ENSAMXG00000037623	-	100	96.789	ENSACLG00000007076	rab11bb	100	96.789	Astatotilapia_calliptera
ENSAMXG00000037623	-	100	96.789	ENSACLG00000005446	-	100	96.789	Astatotilapia_calliptera
ENSAMXG00000037623	-	100	96.789	ENSBTAG00000002475	RAB11B	100	96.789	Bos_taurus
ENSAMXG00000037623	-	96	94.737	ENSCHIG00000022426	-	93	94.737	Capra_hircus
ENSAMXG00000037623	-	100	96.789	ENSCATG00000029188	-	100	96.789	Cercocebus_atys
ENSAMXG00000037623	-	100	97.706	ENSCPBG00000017056	-	100	97.706	Chrysemys_picta_bellii
ENSAMXG00000037623	-	100	96.789	ENSCSEG00000012149	rab11bb	100	96.789	Cynoglossus_semilaevis
ENSAMXG00000037623	-	100	96.330	ENSCSEG00000007239	-	100	96.330	Cynoglossus_semilaevis
ENSAMXG00000037623	-	100	95.872	ENSCVAG00000019718	-	100	95.872	Cyprinodon_variegatus
ENSAMXG00000037623	-	100	96.789	ENSCVAG00000017021	-	100	96.789	Cyprinodon_variegatus
ENSAMXG00000037623	-	100	94.495	ENSCVAG00000019751	-	100	94.495	Cyprinodon_variegatus
ENSAMXG00000037623	-	100	95.872	ENSDARG00000090086	rab11bb	100	95.872	Danio_rerio
ENSAMXG00000037623	-	99	95.392	ENSETEG00000000905	-	99	95.392	Echinops_telfairi
ENSAMXG00000037623	-	99	93.953	ENSEASG00005003708	-	99	93.953	Equus_asinus_asinus
ENSAMXG00000037623	-	99	93.953	ENSECAG00000000716	RAB11B	99	93.953	Equus_caballus
ENSAMXG00000037623	-	100	95.413	ENSELUG00000020948	-	98	98.438	Esox_lucius
ENSAMXG00000037623	-	100	95.413	ENSELUG00000000916	-	100	95.413	Esox_lucius
ENSAMXG00000037623	-	100	95.872	ENSELUG00000021148	rab11bb	100	95.872	Esox_lucius
ENSAMXG00000037623	-	100	97.706	ENSFALG00000011828	-	100	97.706	Ficedula_albicollis
ENSAMXG00000037623	-	100	96.789	ENSFHEG00000018353	rab11bb	100	96.789	Fundulus_heteroclitus
ENSAMXG00000037623	-	100	96.330	ENSFHEG00000022676	-	100	96.330	Fundulus_heteroclitus
ENSAMXG00000037623	-	99	92.593	ENSGMOG00000009668	-	99	92.593	Gadus_morhua
ENSAMXG00000037623	-	100	96.330	ENSGMOG00000009211	rab11bb	100	96.330	Gadus_morhua
ENSAMXG00000037623	-	100	97.706	ENSGALG00000000613	RAB11B	100	97.706	Gallus_gallus
ENSAMXG00000037623	-	100	96.789	ENSGAFG00000007102	rab11bb	100	96.789	Gambusia_affinis
ENSAMXG00000037623	-	100	96.330	ENSGACG00000015479	rab11bb	100	96.330	Gasterosteus_aculeatus
ENSAMXG00000037623	-	100	94.495	ENSGACG00000013297	-	99	94.495	Gasterosteus_aculeatus
ENSAMXG00000037623	-	100	96.789	ENSGGOG00000014516	RAB11B	100	96.789	Gorilla_gorilla
ENSAMXG00000037623	-	100	96.789	ENSHBUG00000009947	-	100	96.789	Haplochromis_burtoni
ENSAMXG00000037623	-	100	96.789	ENSHBUG00000014777	rab11bb	100	96.789	Haplochromis_burtoni
ENSAMXG00000037623	-	100	94.954	ENSHCOG00000000954	-	100	94.954	Hippocampus_comes
ENSAMXG00000037623	-	100	97.248	ENSHCOG00000002423	rab11bb	100	97.248	Hippocampus_comes
ENSAMXG00000037623	-	100	92.661	ENSHCOG00000000985	-	100	92.661	Hippocampus_comes
ENSAMXG00000037623	-	100	99.541	ENSIPUG00000025100	rab11b	100	99.541	Ictalurus_punctatus
ENSAMXG00000037623	-	100	97.706	ENSIPUG00000019927	rab11bb	100	97.706	Ictalurus_punctatus
ENSAMXG00000037623	-	100	96.789	ENSKMAG00000006170	-	100	96.789	Kryptolebias_marmoratus
ENSAMXG00000037623	-	100	96.789	ENSKMAG00000009033	rab11bb	100	96.789	Kryptolebias_marmoratus
ENSAMXG00000037623	-	100	95.872	ENSLBEG00000004172	-	100	95.872	Labrus_bergylta
ENSAMXG00000037623	-	100	97.248	ENSLBEG00000015248	rab11bb	100	97.248	Labrus_bergylta
ENSAMXG00000037623	-	100	88.532	ENSLBEG00000005981	-	100	88.532	Labrus_bergylta
ENSAMXG00000037623	-	100	97.706	ENSLACG00000016857	-	100	97.706	Latimeria_chalumnae
ENSAMXG00000037623	-	100	96.789	ENSMFAG00000003654	RAB11B	100	96.789	Macaca_fascicularis
ENSAMXG00000037623	-	100	96.789	ENSMLEG00000030601	-	100	96.789	Mandrillus_leucophaeus
ENSAMXG00000037623	-	100	96.330	ENSMAMG00000006378	rab11bb	100	96.330	Mastacembelus_armatus
ENSAMXG00000037623	-	100	95.872	ENSMAMG00000018533	-	100	95.872	Mastacembelus_armatus
ENSAMXG00000037623	-	100	96.789	ENSMZEG00005010975	-	100	96.789	Maylandia_zebra
ENSAMXG00000037623	-	100	96.789	ENSMZEG00005003352	rab11bb	100	96.789	Maylandia_zebra
ENSAMXG00000037623	-	100	96.789	ENSMICG00000034065	-	100	96.789	Microcebus_murinus
ENSAMXG00000037623	-	100	96.789	ENSMMOG00000001250	-	100	96.789	Mola_mola
ENSAMXG00000037623	-	94	97.561	ENSMMOG00000007917	rab11bb	100	97.561	Mola_mola
ENSAMXG00000037623	-	99	95.853	ENSMMOG00000001238	-	99	95.853	Mola_mola
ENSAMXG00000037623	-	100	97.706	ENSMODG00000003841	-	100	97.706	Monodelphis_domestica
ENSAMXG00000037623	-	100	96.789	ENSMALG00000022187	rab11bb	100	96.789	Monopterus_albus
ENSAMXG00000037623	-	94	87.923	ENSMLUG00000006677	-	100	87.923	Myotis_lucifugus
ENSAMXG00000037623	-	100	96.789	ENSNBRG00000000372	rab11bb	100	96.789	Neolamprologus_brichardi
ENSAMXG00000037623	-	100	96.789	ENSNBRG00000023885	-	100	96.789	Neolamprologus_brichardi
ENSAMXG00000037623	-	100	97.706	ENSMEUG00000003686	-	100	97.706	Notamacropus_eugenii
ENSAMXG00000037623	-	100	96.789	ENSONIG00000002544	-	100	96.789	Oreochromis_niloticus
ENSAMXG00000037623	-	100	96.789	ENSONIG00000010435	rab11bb	100	96.789	Oreochromis_niloticus
ENSAMXG00000037623	-	50	98.165	ENSOANG00000031567	-	78	98.165	Ornithorhynchus_anatinus
ENSAMXG00000037623	-	99	95.392	ENSORLG00000015284	-	72	95.392	Oryzias_latipes
ENSAMXG00000037623	-	100	96.330	ENSORLG00000013938	rab11bb	100	96.330	Oryzias_latipes
ENSAMXG00000037623	-	99	95.392	ENSORLG00020020844	RAB11B	99	95.392	Oryzias_latipes_hni
ENSAMXG00000037623	-	100	96.330	ENSORLG00020019393	rab11bb	100	96.330	Oryzias_latipes_hni
ENSAMXG00000037623	-	100	96.330	ENSORLG00015020173	rab11bb	100	96.330	Oryzias_latipes_hsok
ENSAMXG00000037623	-	99	95.392	ENSORLG00015016999	RAB11B	99	95.392	Oryzias_latipes_hsok
ENSAMXG00000037623	-	100	96.789	ENSOMEG00000017806	-	100	96.789	Oryzias_melastigma
ENSAMXG00000037623	-	100	95.872	ENSOMEG00000002562	-	100	95.872	Oryzias_melastigma
ENSAMXG00000037623	-	100	96.789	ENSPPAG00000028589	-	100	96.789	Pan_paniscus
ENSAMXG00000037623	-	100	96.789	ENSPTRG00000010422	RAB11B	100	96.789	Pan_troglodytes
ENSAMXG00000037623	-	100	96.789	ENSPANG00000007765	-	100	96.789	Papio_anubis
ENSAMXG00000037623	-	100	96.789	ENSPKIG00000011640	rab11bb	100	96.789	Paramormyrops_kingsleyae
ENSAMXG00000037623	-	100	98.165	ENSPKIG00000011703	-	100	98.165	Paramormyrops_kingsleyae
ENSAMXG00000037623	-	98	96.729	ENSPKIG00000001389	-	69	96.729	Paramormyrops_kingsleyae
ENSAMXG00000037623	-	98	92.237	ENSPSIG00000010242	-	85	92.237	Pelodiscus_sinensis
ENSAMXG00000037623	-	100	96.789	ENSPMGG00000009435	rab11bb	100	96.789	Periophthalmus_magnuspinnatus
ENSAMXG00000037623	-	100	95.872	ENSPMGG00000014333	-	100	95.872	Periophthalmus_magnuspinnatus
ENSAMXG00000037623	-	99	92.627	ENSPMGG00000014336	-	99	92.627	Periophthalmus_magnuspinnatus
ENSAMXG00000037623	-	97	95.283	ENSPCIG00000020371	-	99	95.283	Phascolarctos_cinereus
ENSAMXG00000037623	-	100	96.789	ENSPFOG00000006224	-	100	96.789	Poecilia_formosa
ENSAMXG00000037623	-	100	96.789	ENSPFOG00000024114	-	100	96.789	Poecilia_formosa
ENSAMXG00000037623	-	100	96.789	ENSPLAG00000001598	rab11bb	100	96.789	Poecilia_latipinna
ENSAMXG00000037623	-	100	96.789	ENSPLAG00000014207	-	100	96.789	Poecilia_latipinna
ENSAMXG00000037623	-	100	96.789	ENSPMEG00000007842	-	100	96.789	Poecilia_mexicana
ENSAMXG00000037623	-	100	96.789	ENSPMEG00000012389	rab11bb	100	96.789	Poecilia_mexicana
ENSAMXG00000037623	-	100	96.330	ENSPREG00000006336	-	100	96.330	Poecilia_reticulata
ENSAMXG00000037623	-	100	96.789	ENSPREG00000014269	rab11bb	100	96.789	Poecilia_reticulata
ENSAMXG00000037623	-	100	96.789	ENSPNYG00000004098	rab11bb	100	96.789	Pundamilia_nyererei
ENSAMXG00000037623	-	100	96.789	ENSPNYG00000019611	-	100	96.789	Pundamilia_nyererei
ENSAMXG00000037623	-	100	96.789	ENSRROG00000037812	-	100	96.789	Rhinopithecus_roxellana
ENSAMXG00000037623	-	97	95.755	ENSSHAG00000006816	-	97	95.755	Sarcophilus_harrisii
ENSAMXG00000037623	-	100	97.248	ENSSFOG00015009042	rab11bb	100	97.248	Scleropages_formosus
ENSAMXG00000037623	-	100	72.936	ENSSFOG00015006245	-	100	72.936	Scleropages_formosus
ENSAMXG00000037623	-	100	93.119	ENSSMAG00000018613	-	100	93.119	Scophthalmus_maximus
ENSAMXG00000037623	-	100	96.330	ENSSMAG00000004922	rab11bb	100	96.330	Scophthalmus_maximus
ENSAMXG00000037623	-	100	96.789	ENSSDUG00000013558	rab11bb	100	96.789	Seriola_dumerili
ENSAMXG00000037623	-	100	96.789	ENSSDUG00000002934	-	100	96.789	Seriola_dumerili
ENSAMXG00000037623	-	100	96.789	ENSSLDG00000020676	rab11bb	100	96.789	Seriola_lalandi_dorsalis
ENSAMXG00000037623	-	100	96.789	ENSSLDG00000005275	-	100	96.789	Seriola_lalandi_dorsalis
ENSAMXG00000037623	-	100	98.165	ENSSPUG00000002243	-	100	98.165	Sphenodon_punctatus
ENSAMXG00000037623	-	100	96.789	ENSSPAG00000011419	rab11bb	100	96.789	Stegastes_partitus
ENSAMXG00000037623	-	100	96.789	ENSSPAG00000014559	-	100	96.789	Stegastes_partitus
ENSAMXG00000037623	-	100	97.706	ENSTGUG00000000084	-	100	97.706	Taeniopygia_guttata
ENSAMXG00000037623	-	99	94.931	ENSTRUG00000021614	-	99	94.931	Takifugu_rubripes
ENSAMXG00000037623	-	100	96.789	ENSTRUG00000022029	rab11bb	100	96.789	Takifugu_rubripes
ENSAMXG00000037623	-	99	96.759	ENSTRUG00000021619	-	100	96.759	Takifugu_rubripes
ENSAMXG00000037623	-	93	95.567	ENSTNIG00000002003	-	100	95.567	Tetraodon_nigroviridis
ENSAMXG00000037623	-	99	96.759	ENSTNIG00000013182	-	100	96.759	Tetraodon_nigroviridis
ENSAMXG00000037623	-	99	94.470	ENSTNIG00000013184	-	99	94.470	Tetraodon_nigroviridis
ENSAMXG00000037623	-	100	95.413	ENSTNIG00000011081	rab11bb	100	95.413	Tetraodon_nigroviridis
ENSAMXG00000037623	-	94	96.585	ENSUAMG00000006639	-	99	96.585	Ursus_americanus
ENSAMXG00000037623	-	100	97.260	ENSXETG00000025484	rab11b.1	99	97.260	Xenopus_tropicalis
ENSAMXG00000037623	-	100	96.789	ENSXCOG00000008042	-	100	96.789	Xiphophorus_couchianus
ENSAMXG00000037623	-	100	96.789	ENSXCOG00000009190	-	100	96.789	Xiphophorus_couchianus
ENSAMXG00000037623	-	100	96.789	ENSXMAG00000011926	rab11bb	100	96.789	Xiphophorus_maculatus
ENSAMXG00000037623	-	100	96.330	ENSXMAG00000024840	-	100	96.330	Xiphophorus_maculatus