EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000037637 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 2255 bases
Position: chr19:20158532-20160786
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000052991	RVT_1	PF00078.27	1.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000054058	-	2255	-	ENSAMXP00000052991	599 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000037637's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000037637's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000037637	-	95	37.983	ENSAMXG00000039473	-	52	37.983
ENSAMXG00000037637	-	85	35.182	ENSAMXG00000035893	-	81	35.182
ENSAMXG00000037637	-	69	35.469	ENSAMXG00000042777	-	58	35.469
ENSAMXG00000037637	-	69	36.161	ENSAMXG00000041465	-	61	36.161
ENSAMXG00000037637	-	70	33.890	ENSAMXG00000040471	-	61	33.890
ENSAMXG00000037637	-	95	38.737	ENSAMXG00000037864	-	51	38.737
ENSAMXG00000037637	-	74	39.232	ENSAMXG00000043631	-	55	39.232

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000037637	-	92	34.122	ENSACLG00000020185	-	85	34.122	Astatotilapia_calliptera
ENSAMXG00000037637	-	69	36.902	ENSACLG00000010008	-	64	36.902	Astatotilapia_calliptera
ENSAMXG00000037637	-	51	35.599	ENSCPBG00000005584	-	66	35.599	Chrysemys_picta_bellii
ENSAMXG00000037637	-	72	35.581	ENSEBUG00000005844	-	93	35.581	Eptatretus_burgeri
ENSAMXG00000037637	-	70	37.104	ENSHCOG00000004962	-	62	37.104	Hippocampus_comes
ENSAMXG00000037637	-	90	31.552	ENSLACG00000016114	-	50	31.552	Latimeria_chalumnae
ENSAMXG00000037637	-	58	38.462	ENSLACG00000005365	-	78	38.462	Latimeria_chalumnae
ENSAMXG00000037637	-	94	37.396	ENSMALG00000004164	-	95	37.396	Monopterus_albus
ENSAMXG00000037637	-	89	34.281	ENSMALG00000014073	-	76	34.281	Monopterus_albus
ENSAMXG00000037637	-	82	35.590	ENSORLG00000021828	-	62	35.271	Oryzias_latipes
ENSAMXG00000037637	-	90	36.607	ENSORLG00000028047	-	86	36.607	Oryzias_latipes
ENSAMXG00000037637	-	53	38.050	ENSPFOG00000023854	-	71	38.050	Poecilia_formosa
ENSAMXG00000037637	-	55	42.424	ENSXMAG00000024510	-	86	42.424	Xiphophorus_maculatus