EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000037658 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 44852 bases
Position: chrAPWO02002305.1:74186-119037
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000034864	zf-CCHC	PF00098.23	8.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000054713	-	1005	-	ENSAMXP00000034864	334 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000037658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000037658's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000037658	-	68	60.088	ENSAMXG00000029829	-	56	60.088
ENSAMXG00000037658	-	67	52.444	ENSAMXG00000040142	-	59	52.444
ENSAMXG00000037658	-	67	57.778	ENSAMXG00000035044	-	63	57.778
ENSAMXG00000037658	-	71	55.042	ENSAMXG00000040095	-	67	55.042

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000037658	-	76	33.462	ENSG00000247315	ZCCHC3	72	33.106	Homo_sapiens
ENSAMXG00000037658	-	81	31.579	ENSAMEG00000013999	ZCCHC3	92	31.579	Ailuropoda_melanoleuca
ENSAMXG00000037658	-	76	33.205	ENSANAG00000013484	ZCCHC3	73	32.990	Aotus_nancymaae
ENSAMXG00000037658	-	70	54.202	ENSACLG00000026211	-	51	54.202	Astatotilapia_calliptera
ENSAMXG00000037658	-	82	31.757	ENSBTAG00000002116	ZCCHC3	73	31.757	Bos_taurus
ENSAMXG00000037658	-	76	33.205	ENSCJAG00000020839	ZCCHC3	73	32.653	Callithrix_jacchus
ENSAMXG00000037658	-	71	32.780	ENSCAFG00000025206	ZCCHC3	99	31.408	Canis_familiaris
ENSAMXG00000037658	-	76	32.197	ENSCAFG00020004076	ZCCHC3	73	32.542	Canis_lupus_dingo
ENSAMXG00000037658	-	71	32.780	ENSCHIG00000009882	ZCCHC3	73	32.095	Capra_hircus
ENSAMXG00000037658	-	76	32.558	ENSCPOG00000023974	ZCCHC3	76	30.844	Cavia_porcellus
ENSAMXG00000037658	-	76	33.591	ENSCCAG00000016869	ZCCHC3	73	32.770	Cebus_capucinus
ENSAMXG00000037658	-	76	33.591	ENSCATG00000022200	ZCCHC3	72	33.219	Cercocebus_atys
ENSAMXG00000037658	-	75	33.333	ENSCLAG00000000269	ZCCHC3	73	32.646	Chinchilla_lanigera
ENSAMXG00000037658	-	76	33.205	ENSCSAG00000018761	ZCCHC3	72	32.877	Chlorocebus_sabaeus
ENSAMXG00000037658	-	80	32.721	ENSCANG00000010812	ZCCHC3	98	32.721	Colobus_angolensis_palliatus
ENSAMXG00000037658	-	71	31.950	ENSCGRG00001011895	-	66	31.950	Cricetulus_griseus_chok1gshd
ENSAMXG00000037658	-	81	32.609	ENSCGRG00001009163	-	67	32.609	Cricetulus_griseus_chok1gshd
ENSAMXG00000037658	-	71	31.950	ENSCGRG00000008273	-	66	31.950	Cricetulus_griseus_crigri
ENSAMXG00000037658	-	82	31.186	ENSDNOG00000047357	ZCCHC3	73	31.864	Dasypus_novemcinctus
ENSAMXG00000037658	-	71	32.780	ENSEASG00005003629	ZCCHC3	72	31.849	Equus_asinus_asinus
ENSAMXG00000037658	-	71	32.780	ENSECAG00000001035	ZCCHC3	72	31.849	Equus_caballus
ENSAMXG00000037658	-	57	30.208	ENSELUG00000017799	-	62	30.208	Esox_lucius
ENSAMXG00000037658	-	76	32.955	ENSFCAG00000026760	ZCCHC3	72	32.881	Felis_catus
ENSAMXG00000037658	-	59	31.500	ENSGGOG00000044213	ZCCHC3	61	31.500	Gorilla_gorilla
ENSAMXG00000037658	-	72	53.878	ENSHBUG00000005879	-	89	53.878	Haplochromis_burtoni
ENSAMXG00000037658	-	76	32.819	ENSHGLG00000019351	ZCCHC3	73	31.959	Heterocephalus_glaber_female
ENSAMXG00000037658	-	80	30.824	ENSHGLG00100009699	ZCCHC3	82	30.175	Heterocephalus_glaber_male
ENSAMXG00000037658	-	86	31.596	ENSJJAG00000020375	Zcchc3	75	31.596	Jaculus_jaculus
ENSAMXG00000037658	-	68	31.304	ENSLACG00000012103	-	68	31.304	Latimeria_chalumnae
ENSAMXG00000037658	-	67	32.751	ENSLACG00000004809	-	63	30.000	Latimeria_chalumnae
ENSAMXG00000037658	-	68	30.131	ENSLACG00000002864	-	77	30.131	Latimeria_chalumnae
ENSAMXG00000037658	-	67	32.456	ENSLACG00000002300	-	68	32.456	Latimeria_chalumnae
ENSAMXG00000037658	-	61	31.884	ENSLACG00000022551	-	54	31.884	Latimeria_chalumnae
ENSAMXG00000037658	-	70	30.672	ENSLACG00000003445	-	58	30.672	Latimeria_chalumnae
ENSAMXG00000037658	-	68	31.304	ENSLACG00000003328	-	81	31.304	Latimeria_chalumnae
ENSAMXG00000037658	-	50	32.203	ENSLOCG00000017303	-	94	32.203	Lepisosteus_oculatus
ENSAMXG00000037658	-	50	32.768	ENSLOCG00000017639	-	98	32.768	Lepisosteus_oculatus
ENSAMXG00000037658	-	62	32.759	ENSLOCG00000000320	-	87	32.759	Lepisosteus_oculatus
ENSAMXG00000037658	-	76	31.818	ENSLAFG00000030593	ZCCHC3	97	32.576	Loxodonta_africana
ENSAMXG00000037658	-	76	33.591	ENSMFAG00000044780	ZCCHC3	72	33.219	Macaca_fascicularis
ENSAMXG00000037658	-	76	33.591	ENSMMUG00000038935	ZCCHC3	72	33.219	Macaca_mulatta
ENSAMXG00000037658	-	76	33.591	ENSMNEG00000000405	ZCCHC3	72	33.219	Macaca_nemestrina
ENSAMXG00000037658	-	51	30.114	ENSMZEG00005028130	-	83	30.114	Maylandia_zebra
ENSAMXG00000037658	-	70	54.661	ENSMZEG00005021211	-	60	54.661	Maylandia_zebra
ENSAMXG00000037658	-	76	33.462	ENSMICG00000031267	ZCCHC3	73	32.877	Microcebus_murinus
ENSAMXG00000037658	-	76	33.591	ENSMOCG00000002870	Zcchc3	65	33.591	Microtus_ochrogaster
ENSAMXG00000037658	-	68	53.247	ENSMMOG00000004516	-	70	53.247	Mola_mola
ENSAMXG00000037658	-	82	32.624	MGP_CAROLIEiJ_G0024454	Zcchc3	70	32.624	Mus_caroli
ENSAMXG00000037658	-	82	32.624	ENSMUSG00000074682	Zcchc3	70	32.624	Mus_musculus
ENSAMXG00000037658	-	82	32.624	MGP_PahariEiJ_G0025898	Zcchc3	70	32.624	Mus_pahari
ENSAMXG00000037658	-	82	32.624	MGP_SPRETEiJ_G0025375	Zcchc3	70	32.624	Mus_spretus
ENSAMXG00000037658	-	83	32.302	ENSNGAG00000006074	Zcchc3	74	32.302	Nannospalax_galili
ENSAMXG00000037658	-	69	50.000	ENSNBRG00000016105	-	52	50.000	Neolamprologus_brichardi
ENSAMXG00000037658	-	54	56.906	ENSNBRG00000022137	-	90	56.906	Neolamprologus_brichardi
ENSAMXG00000037658	-	76	31.783	ENSNLEG00000009533	ZCCHC3	71	31.959	Nomascus_leucogenys
ENSAMXG00000037658	-	71	32.231	ENSOPRG00000005081	ZCCHC3	71	30.952	Ochotona_princeps
ENSAMXG00000037658	-	82	31.399	ENSODEG00000010730	ZCCHC3	73	31.399	Octodon_degus
ENSAMXG00000037658	-	82	32.143	ENSOCUG00000017024	ZCCHC3	73	32.862	Oryctolagus_cuniculus
ENSAMXG00000037658	-	71	33.195	ENSOGAG00000025208	ZCCHC3	73	32.095	Otolemur_garnettii
ENSAMXG00000037658	-	71	32.780	ENSOARG00000019161	ZCCHC3	98	32.168	Ovis_aries
ENSAMXG00000037658	-	76	33.080	ENSPPAG00000010453	-	99	32.700	Pan_paniscus
ENSAMXG00000037658	-	76	32.955	ENSPPRG00000014724	ZCCHC3	73	32.881	Panthera_pardus
ENSAMXG00000037658	-	71	31.092	ENSPTIG00000009393	ZCCHC3	98	31.092	Panthera_tigris_altaica
ENSAMXG00000037658	-	72	33.466	ENSPTRG00000047645	ZCCHC3	70	32.746	Pan_troglodytes
ENSAMXG00000037658	-	76	33.591	ENSPANG00000013450	ZCCHC3	72	33.219	Papio_anubis
ENSAMXG00000037658	-	77	33.206	ENSPEMG00000009059	Zcchc3	74	32.313	Peromyscus_maniculatus_bairdii
ENSAMXG00000037658	-	69	31.621	ENSPCAG00000008034	ZCCHC3	66	32.520	Procavia_capensis
ENSAMXG00000037658	-	76	33.077	ENSPCOG00000012289	ZCCHC3	73	32.534	Propithecus_coquereli
ENSAMXG00000037658	-	82	30.847	ENSPVAG00000000182	ZCCHC3	73	30.847	Pteropus_vampyrus
ENSAMXG00000037658	-	81	32.364	ENSRNOG00000007520	Zcchc3	68	32.364	Rattus_norvegicus
ENSAMXG00000037658	-	76	33.591	ENSRBIG00000029757	ZCCHC3	72	33.219	Rhinopithecus_bieti
ENSAMXG00000037658	-	76	33.591	ENSRROG00000005210	ZCCHC3	72	33.219	Rhinopithecus_roxellana
ENSAMXG00000037658	-	82	32.432	ENSSSCG00000007211	ZCCHC3	73	32.432	Sus_scrofa
ENSAMXG00000037658	-	82	32.095	ENSTTRG00000008511	ZCCHC3	73	32.432	Tursiops_truncatus
ENSAMXG00000037658	-	82	32.432	ENSUAMG00000023407	ZCCHC3	74	32.432	Ursus_americanus
ENSAMXG00000037658	-	67	31.441	ENSVPAG00000011267	-	93	31.441	Vicugna_pacos
ENSAMXG00000037658	-	53	30.000	ENSXETG00000031282	-	95	30.625	Xenopus_tropicalis
ENSAMXG00000037658	-	54	31.148	ENSXETG00000033661	-	96	31.148	Xenopus_tropicalis
ENSAMXG00000037658	-	54	31.148	ENSXETG00000033566	-	96	31.148	Xenopus_tropicalis
ENSAMXG00000037658	-	54	31.148	ENSXETG00000034120	-	96	31.148	Xenopus_tropicalis
ENSAMXG00000037658	-	57	30.890	ENSXETG00000033553	-	100	30.890	Xenopus_tropicalis
ENSAMXG00000037658	-	53	30.000	ENSXETG00000032402	-	95	30.625	Xenopus_tropicalis
ENSAMXG00000037658	-	54	30.601	ENSXETG00000034004	-	96	30.601	Xenopus_tropicalis