EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000037666 (Gene tree)
Gene ID: 103028476
Gene Symbol: si:ch211-217k17.7
Alias: im:7155625
Full Name: coiled-coil domain containing 86
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 8707 bases
Position: chrAPWO02000103.1:112390-121096
Accession: 103028476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000041725	Cgr1	PF03879.14	4.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000042152	-	3623	XM_022668287	ENSAMXP00000041725	218 (aa)	XP_022524008	UPI000BBDEA06

Gene Model

Click here to download ENSAMXG00000037666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000037666's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000037666	si:ch211-217k17.7	55	67.500	ENSG00000110104	CCDC86	93	63.918	Homo_sapiens
ENSAMXG00000037666	si:ch211-217k17.7	58	61.719	ENSACAG00000017814	CCDC86	77	61.719	Anolis_carolinensis
ENSAMXG00000037666	si:ch211-217k17.7	50	48.148	WBGene00012739	Y40B1B.7	88	48.148	Caenorhabditis_elegans
ENSAMXG00000037666	si:ch211-217k17.7	64	55.405	ENSCAFG00000016456	CCDC86	50	55.405	Canis_familiaris
ENSAMXG00000037666	si:ch211-217k17.7	64	55.405	ENSCAFG00020012558	CCDC86	50	55.405	Canis_lupus_dingo
ENSAMXG00000037666	si:ch211-217k17.7	77	52.023	ENSCPOG00000027361	CCDC86	51	52.023	Cavia_porcellus
ENSAMXG00000037666	si:ch211-217k17.7	50	59.091	ENSCING00000022286	-	83	59.091	Ciona_intestinalis
ENSAMXG00000037666	si:ch211-217k17.7	87	58.081	ENSCSEG00000002637	si:ch211-217k17.7	54	65.806	Cynoglossus_semilaevis
ENSAMXG00000037666	si:ch211-217k17.7	75	66.082	ENSDARG00000059908	si:ch211-217k17.7	60	66.082	Danio_rerio
ENSAMXG00000037666	si:ch211-217k17.7	52	48.246	FBgn0031040	CG14210	91	44.961	Drosophila_melanogaster
ENSAMXG00000037666	si:ch211-217k17.7	80	60.989	ENSELUG00000022687	si:ch211-217k17.7	60	60.541	Esox_lucius
ENSAMXG00000037666	si:ch211-217k17.7	54	76.923	ENSGMOG00000016242	-	65	57.627	Gadus_morhua
ENSAMXG00000037666	si:ch211-217k17.7	54	76.068	ENSGACG00000017630	si:ch211-217k17.7	51	76.068	Gasterosteus_aculeatus
ENSAMXG00000037666	si:ch211-217k17.7	82	61.878	ENSHBUG00000010352	si:ch211-217k17.7	58	63.743	Haplochromis_burtoni
ENSAMXG00000037666	si:ch211-217k17.7	55	62.500	ENSHGLG00100010685	CCDC86	50	62.500	Heterocephalus_glaber_male
ENSAMXG00000037666	si:ch211-217k17.7	72	62.651	ENSLBEG00000020547	-	57	62.651	Labrus_bergylta
ENSAMXG00000037666	si:ch211-217k17.7	82	61.878	ENSMZEG00005019822	si:ch211-217k17.7	64	59.474	Maylandia_zebra
ENSAMXG00000037666	si:ch211-217k17.7	88	58.291	ENSMMOG00000006446	si:ch211-217k17.7	62	61.453	Mola_mola
ENSAMXG00000037666	si:ch211-217k17.7	64	71.223	ENSNBRG00000013330	-	85	74.510	Neolamprologus_brichardi
ENSAMXG00000037666	si:ch211-217k17.7	82	62.570	ENSONIG00000017568	si:ch211-217k17.7	63	61.453	Oreochromis_niloticus
ENSAMXG00000037666	si:ch211-217k17.7	52	84.071	ENSORLG00000006331	-	62	65.476	Oryzias_latipes
ENSAMXG00000037666	si:ch211-217k17.7	52	84.071	ENSORLG00020021345	si:ch211-217k17.7	58	67.722	Oryzias_latipes_hni
ENSAMXG00000037666	si:ch211-217k17.7	52	84.071	ENSORLG00015021538	si:ch211-217k17.7	62	65.269	Oryzias_latipes_hsok
ENSAMXG00000037666	si:ch211-217k17.7	59	70.504	ENSPMGG00000023665	si:ch211-217k17.7	50	70.504	Periophthalmus_magnuspinnatus
ENSAMXG00000037666	si:ch211-217k17.7	96	73.756	ENSPNAG00000010886	si:ch211-217k17.7	83	78.836	Pygocentrus_nattereri
ENSAMXG00000037666	si:ch211-217k17.7	54	80.508	ENSSLDG00000016681	si:ch211-217k17.7	63	58.333	Seriola_lalandi_dorsalis
ENSAMXG00000037666	si:ch211-217k17.7	84	49.495	ENSSSCG00000013105	CCDC86	51	50.811	Sus_scrofa
ENSAMXG00000037666	si:ch211-217k17.7	78	59.763	ENSXCOG00000011207	si:ch211-217k17.7	50	59.763	Xiphophorus_couchianus
ENSAMXG00000037666	si:ch211-217k17.7	78	61.538	ENSXMAG00000005529	si:ch211-217k17.7	50	61.538	Xiphophorus_maculatus