EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000037695 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger and SCAN domain-containing protein 2-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 10850 bases
Position: chrAPWO02002262.1:8364-19213
Accession: 111190628
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000042566	zf-C2H2	PF00096.26	8e-29	1	5
ENSAMXP00000042566	zf-C2H2	PF00096.26	8e-29	2	5
ENSAMXP00000042566	zf-C2H2	PF00096.26	8e-29	3	5
ENSAMXP00000042566	zf-C2H2	PF00096.26	8e-29	4	5
ENSAMXP00000042566	zf-C2H2	PF00096.26	8e-29	5	5
ENSAMXP00000038493	zf-C2H2	PF00096.26	1.5e-28	1	5
ENSAMXP00000038493	zf-C2H2	PF00096.26	1.5e-28	2	5
ENSAMXP00000038493	zf-C2H2	PF00096.26	1.5e-28	3	5
ENSAMXP00000038493	zf-C2H2	PF00096.26	1.5e-28	4	5
ENSAMXP00000038493	zf-C2H2	PF00096.26	1.5e-28	5	5
ENSAMXP00000042566	zf-met	PF12874.7	5.7e-06	1	1
ENSAMXP00000038493	zf-met	PF12874.7	6.5e-06	1	1
ENSAMXP00000042566	zf-C2H2_jaz	PF12171.8	5.9e-14	1	1
ENSAMXP00000038493	zf-C2H2_jaz	PF12171.8	6.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000053386	-	5756	XM_022664339	ENSAMXP00000038493	402 (aa)	XP_022520060	-
ENSAMXT00000040704	-	5920	-	ENSAMXP00000042566	403 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000037695's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000037695's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000037695	-	51	50.376	ENSAMXG00000037143	-	93	50.376
ENSAMXG00000037695	-	60	40.769	ENSAMXG00000039622	zbtb41	74	40.769
ENSAMXG00000037695	-	86	48.921	ENSAMXG00000035127	-	93	50.450
ENSAMXG00000037695	-	53	53.383	ENSAMXG00000038284	-	93	53.383
ENSAMXG00000037695	-	80	58.491	ENSAMXG00000037760	-	95	58.491
ENSAMXG00000037695	-	52	50.000	ENSAMXG00000035286	si:ch1073-224n8.1	83	53.398
ENSAMXG00000037695	-	52	51.128	ENSAMXG00000036915	-	97	51.128

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000037695	-	87	42.663	ENSDARG00000075194	si:dkey-56e3.3	61	42.663	Danio_rerio
ENSAMXG00000037695	-	72	48.148	ENSELUG00000007694	-	91	48.148	Esox_lucius
ENSAMXG00000037695	-	55	51.880	ENSHCOG00000007681	-	93	51.880	Hippocampus_comes
ENSAMXG00000037695	-	51	53.509	ENSORLG00000024263	-	62	53.509	Oryzias_latipes
ENSAMXG00000037695	-	86	51.852	ENSORLG00000027974	-	91	51.852	Oryzias_latipes
ENSAMXG00000037695	-	57	35.193	ENSORLG00020000264	-	51	35.193	Oryzias_latipes_hni
ENSAMXG00000037695	-	51	43.284	ENSORLG00020008484	-	87	43.284	Oryzias_latipes_hni
ENSAMXG00000037695	-	86	48.148	ENSORLG00020021196	-	78	48.148	Oryzias_latipes_hni
ENSAMXG00000037695	-	50	51.852	ENSORLG00020009419	-	93	46.018	Oryzias_latipes_hni
ENSAMXG00000037695	-	52	43.210	ENSORLG00020000639	-	53	43.210	Oryzias_latipes_hni
ENSAMXG00000037695	-	79	46.479	ENSORLG00015010834	-	71	47.761	Oryzias_latipes_hsok
ENSAMXG00000037695	-	80	50.000	ENSORLG00015012121	-	66	47.368	Oryzias_latipes_hsok
ENSAMXG00000037695	-	52	43.796	ENSORLG00015010720	-	67	46.528	Oryzias_latipes_hsok
ENSAMXG00000037695	-	92	49.265	ENSOMEG00000016853	-	93	49.265	Oryzias_melastigma
ENSAMXG00000037695	-	85	47.788	ENSOMEG00000012273	-	98	47.788	Oryzias_melastigma
ENSAMXG00000037695	-	80	51.327	ENSOMEG00000008352	-	97	51.327	Oryzias_melastigma
ENSAMXG00000037695	-	51	50.000	ENSOMEG00000015460	-	60	50.926	Oryzias_melastigma
ENSAMXG00000037695	-	79	49.630	ENSOMEG00000013158	-	94	49.630	Oryzias_melastigma
ENSAMXG00000037695	-	85	50.862	ENSOMEG00000007919	-	77	47.126	Oryzias_melastigma
ENSAMXG00000037695	-	54	52.212	ENSOMEG00000007495	-	98	52.212	Oryzias_melastigma
ENSAMXG00000037695	-	86	50.725	ENSOMEG00000017797	-	92	50.725	Oryzias_melastigma
ENSAMXG00000037695	-	100	62.927	ENSPNAG00000000483	-	100	62.927	Pygocentrus_nattereri