EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000037699 (Gene tree)
Gene ID: 103046447
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 70-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 3015 bases
Position: chr22:27328818-27331832
Accession: 103046447
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000038480	zf-C2H2	PF00096.26	3.3e-11	1	2
ENSAMXP00000038480	zf-C2H2	PF00096.26	3.3e-11	2	2
ENSAMXP00000038480	zf-met	PF12874.7	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000049759	-	2209	XM_022682730	ENSAMXP00000038480	323 (aa)	XP_022538451	UPI000BBD6189

Gene Model

Click here to download ENSAMXG00000037699's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000037699's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000037699	-	63	41.379	ENSAMXG00000040212	-	82	41.379
ENSAMXG00000037699	-	50	41.346	ENSAMXG00000035286	si:ch1073-224n8.1	95	41.346
ENSAMXG00000037699	-	54	45.545	ENSAMXG00000036257	-	91	45.545
ENSAMXG00000037699	-	50	41.748	ENSAMXG00000037326	-	90	41.346
ENSAMXG00000037699	-	52	44.086	ENSAMXG00000040630	-	98	44.086
ENSAMXG00000037699	-	95	33.923	ENSAMXG00000035090	-	99	32.836
ENSAMXG00000037699	-	55	42.241	ENSAMXG00000036762	-	96	42.241
ENSAMXG00000037699	-	61	45.205	ENSAMXG00000037382	-	51	45.205
ENSAMXG00000037699	-	96	45.946	ENSAMXG00000007441	-	63	45.946
ENSAMXG00000037699	-	55	40.517	ENSAMXG00000032619	-	96	40.517
ENSAMXG00000037699	-	55	40.000	ENSAMXG00000031794	-	95	40.000
ENSAMXG00000037699	-	71	42.391	ENSAMXG00000037923	-	99	42.391
ENSAMXG00000037699	-	56	41.584	ENSAMXG00000040198	-	50	41.584
ENSAMXG00000037699	-	51	39.252	ENSAMXG00000013492	-	91	52.500
ENSAMXG00000037699	-	57	38.095	ENSAMXG00000037709	-	99	38.095

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000037699	-	96	38.750	ENSCVAG00000004508	-	99	38.750	Cyprinodon_variegatus
ENSAMXG00000037699	-	63	36.709	ENSDARG00000088927	CR450793.1	89	37.255	Danio_rerio
ENSAMXG00000037699	-	96	38.938	ENSFHEG00000018266	-	96	38.938	Fundulus_heteroclitus
ENSAMXG00000037699	-	93	33.129	ENSIPUG00000024007	-	98	33.333	Ictalurus_punctatus
ENSAMXG00000037699	-	95	36.893	ENSNBRG00000013838	-	97	36.893	Neolamprologus_brichardi
ENSAMXG00000037699	-	96	38.462	ENSOMEG00000010906	-	98	37.647	Oryzias_melastigma
ENSAMXG00000037699	-	76	37.500	ENSPMEG00000023113	-	64	37.931	Poecilia_mexicana
ENSAMXG00000037699	-	96	41.071	ENSPREG00000004006	-	100	41.071	Poecilia_reticulata