EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000037709 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 2564 bases
Position: chrAPWO02000119.1:682789-685352
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000045718	zf-C2H2	PF00096.26	2.4e-56	1	9
ENSAMXP00000045718	zf-C2H2	PF00096.26	2.4e-56	2	9
ENSAMXP00000045718	zf-C2H2	PF00096.26	2.4e-56	3	9
ENSAMXP00000045718	zf-C2H2	PF00096.26	2.4e-56	4	9
ENSAMXP00000045718	zf-C2H2	PF00096.26	2.4e-56	5	9
ENSAMXP00000045718	zf-C2H2	PF00096.26	2.4e-56	6	9
ENSAMXP00000045718	zf-C2H2	PF00096.26	2.4e-56	7	9
ENSAMXP00000045718	zf-C2H2	PF00096.26	2.4e-56	8	9
ENSAMXP00000045718	zf-C2H2	PF00096.26	2.4e-56	9	9
ENSAMXP00000045718	zf-met	PF12874.7	8.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000048031	-	936	-	ENSAMXP00000045718	311 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000037709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000037709's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000037709	-	94	36.111	ENSAMXG00000002273	patz1	57	35.246
ENSAMXG00000037709	-	94	44.928	ENSAMXG00000033252	-	91	48.182
ENSAMXG00000037709	-	85	59.524	ENSAMXG00000037923	-	99	59.524
ENSAMXG00000037709	-	81	66.270	ENSAMXG00000041404	-	97	67.925
ENSAMXG00000037709	-	82	38.672	ENSAMXG00000025761	-	92	36.770
ENSAMXG00000037709	-	89	38.356	ENSAMXG00000039849	snai1b	56	38.356
ENSAMXG00000037709	-	85	57.317	ENSAMXG00000012604	-	96	57.317
ENSAMXG00000037709	-	87	48.810	ENSAMXG00000012589	-	86	48.810
ENSAMXG00000037709	-	86	65.414	ENSAMXG00000035920	-	92	65.414
ENSAMXG00000037709	-	95	60.714	ENSAMXG00000044110	-	95	60.714
ENSAMXG00000037709	-	82	57.915	ENSAMXG00000043541	-	81	57.915
ENSAMXG00000037709	-	96	66.270	ENSAMXG00000037885	-	97	66.270
ENSAMXG00000037709	-	99	38.095	ENSAMXG00000037699	-	57	38.095
ENSAMXG00000037709	-	86	64.455	ENSAMXG00000035145	-	66	64.455
ENSAMXG00000037709	-	94	59.127	ENSAMXG00000029960	-	96	59.127
ENSAMXG00000037709	-	83	36.471	ENSAMXG00000001155	si:dkey-89b17.4	63	36.471
ENSAMXG00000037709	-	86	62.451	ENSAMXG00000030742	-	98	62.451
ENSAMXG00000037709	-	82	48.214	ENSAMXG00000016921	znf341	52	36.306
ENSAMXG00000037709	-	94	47.107	ENSAMXG00000034333	-	91	47.107
ENSAMXG00000037709	-	83	65.066	ENSAMXG00000033500	-	94	65.066
ENSAMXG00000037709	-	86	66.142	ENSAMXG00000029878	-	98	66.142
ENSAMXG00000037709	-	90	60.714	ENSAMXG00000013274	-	97	60.714
ENSAMXG00000037709	-	86	60.886	ENSAMXG00000038324	-	79	60.886
ENSAMXG00000037709	-	89	52.963	ENSAMXG00000038325	-	99	58.333
ENSAMXG00000037709	-	86	63.052	ENSAMXG00000039162	-	97	63.052
ENSAMXG00000037709	-	81	66.270	ENSAMXG00000043251	-	96	66.270
ENSAMXG00000037709	-	86	60.714	ENSAMXG00000039752	-	92	60.714
ENSAMXG00000037709	-	86	65.873	ENSAMXG00000031501	-	89	65.873
ENSAMXG00000037709	-	82	64.615	ENSAMXG00000029161	-	82	64.615
ENSAMXG00000037709	-	95	67.327	ENSAMXG00000041725	-	99	67.327
ENSAMXG00000037709	-	86	66.270	ENSAMXG00000035809	-	99	66.270
ENSAMXG00000037709	-	82	58.506	ENSAMXG00000037326	-	92	58.506
ENSAMXG00000037709	-	94	58.590	ENSAMXG00000035875	-	99	58.590
ENSAMXG00000037709	-	90	62.222	ENSAMXG00000032841	-	85	62.222
ENSAMXG00000037709	-	79	40.152	ENSAMXG00000038085	scrt1a	52	40.152
ENSAMXG00000037709	-	88	62.085	ENSAMXG00000031646	-	99	62.085
ENSAMXG00000037709	-	86	63.095	ENSAMXG00000025452	-	99	63.095
ENSAMXG00000037709	-	86	64.751	ENSAMXG00000025455	-	99	64.751
ENSAMXG00000037709	-	86	69.000	ENSAMXG00000008613	-	97	69.000
ENSAMXG00000037709	-	81	60.773	ENSAMXG00000043019	-	92	60.773
ENSAMXG00000037709	-	85	65.789	ENSAMXG00000042167	-	98	65.789
ENSAMXG00000037709	-	79	46.667	ENSAMXG00000044096	-	83	46.667
ENSAMXG00000037709	-	89	63.052	ENSAMXG00000034402	-	93	63.052
ENSAMXG00000037709	-	94	47.577	ENSAMXG00000035127	-	89	48.485
ENSAMXG00000037709	-	81	55.484	ENSAMXG00000043302	-	76	55.484
ENSAMXG00000037709	-	81	64.394	ENSAMXG00000042774	-	94	64.394
ENSAMXG00000037709	-	82	60.959	ENSAMXG00000039432	-	94	60.959
ENSAMXG00000037709	-	94	55.556	ENSAMXG00000035286	si:ch1073-224n8.1	86	53.000
ENSAMXG00000037709	-	86	61.207	ENSAMXG00000038453	-	85	61.207
ENSAMXG00000037709	-	92	55.823	ENSAMXG00000039408	-	96	55.823
ENSAMXG00000037709	-	89	59.067	ENSAMXG00000041861	-	94	59.067
ENSAMXG00000037709	-	86	65.476	ENSAMXG00000032457	-	93	65.476
ENSAMXG00000037709	-	94	42.975	ENSAMXG00000033299	-	74	42.975
ENSAMXG00000037709	-	88	59.289	ENSAMXG00000026143	-	98	59.289
ENSAMXG00000037709	-	94	62.302	ENSAMXG00000026142	-	97	62.302
ENSAMXG00000037709	-	81	56.872	ENSAMXG00000044107	-	85	56.627
ENSAMXG00000037709	-	85	48.864	ENSAMXG00000007973	-	97	48.864
ENSAMXG00000037709	-	79	59.459	ENSAMXG00000019489	-	93	59.459
ENSAMXG00000037709	-	88	63.095	ENSAMXG00000042593	-	98	63.095
ENSAMXG00000037709	-	94	62.209	ENSAMXG00000031307	-	67	62.209
ENSAMXG00000037709	-	86	57.371	ENSAMXG00000037143	-	94	65.517
ENSAMXG00000037709	-	90	58.874	ENSAMXG00000012873	-	96	57.872
ENSAMXG00000037709	-	86	40.496	ENSAMXG00000033001	-	60	40.496
ENSAMXG00000037709	-	89	60.274	ENSAMXG00000031794	-	100	60.274
ENSAMXG00000037709	-	89	60.000	ENSAMXG00000039700	-	93	60.000
ENSAMXG00000037709	-	91	65.351	ENSAMXG00000037703	-	96	65.351
ENSAMXG00000037709	-	86	63.830	ENSAMXG00000029518	-	54	63.830
ENSAMXG00000037709	-	88	60.317	ENSAMXG00000017959	-	98	60.317
ENSAMXG00000037709	-	86	47.674	ENSAMXG00000037382	-	60	42.308
ENSAMXG00000037709	-	86	61.423	ENSAMXG00000032619	-	99	61.423
ENSAMXG00000037709	-	87	59.036	ENSAMXG00000003002	-	96	59.036
ENSAMXG00000037709	-	81	60.000	ENSAMXG00000029109	-	86	60.000
ENSAMXG00000037709	-	90	60.455	ENSAMXG00000043291	-	78	60.455
ENSAMXG00000037709	-	84	64.435	ENSAMXG00000038636	-	98	64.435
ENSAMXG00000037709	-	86	60.714	ENSAMXG00000038536	-	89	60.714
ENSAMXG00000037709	-	86	39.394	ENSAMXG00000034158	scrt2	52	39.394
ENSAMXG00000037709	-	89	62.302	ENSAMXG00000010078	-	90	62.302
ENSAMXG00000037709	-	92	63.964	ENSAMXG00000035949	-	82	63.964
ENSAMXG00000037709	-	94	45.775	ENSAMXG00000035246	-	74	45.775
ENSAMXG00000037709	-	90	61.508	ENSAMXG00000034958	-	95	61.508
ENSAMXG00000037709	-	95	39.033	ENSAMXG00000041864	prdm5	88	39.033
ENSAMXG00000037709	-	81	56.306	ENSAMXG00000009563	-	95	56.306
ENSAMXG00000037709	-	88	56.250	ENSAMXG00000033124	-	63	56.250
ENSAMXG00000037709	-	96	61.905	ENSAMXG00000037760	-	100	61.905
ENSAMXG00000037709	-	86	62.656	ENSAMXG00000039004	-	88	62.656
ENSAMXG00000037709	-	86	67.333	ENSAMXG00000025965	-	94	67.333
ENSAMXG00000037709	-	81	58.228	ENSAMXG00000043978	-	86	58.228
ENSAMXG00000037709	-	86	61.261	ENSAMXG00000029828	-	97	61.261
ENSAMXG00000037709	-	90	37.743	ENSAMXG00000039622	zbtb41	58	37.743
ENSAMXG00000037709	-	99	47.857	ENSAMXG00000013492	-	98	48.756
ENSAMXG00000037709	-	86	61.905	ENSAMXG00000031489	-	93	61.905
ENSAMXG00000037709	-	90	45.775	ENSAMXG00000034934	-	86	45.775
ENSAMXG00000037709	-	82	56.790	ENSAMXG00000042784	-	97	56.790
ENSAMXG00000037709	-	84	66.304	ENSAMXG00000029178	-	96	66.304
ENSAMXG00000037709	-	93	65.502	ENSAMXG00000041975	-	90	65.502
ENSAMXG00000037709	-	82	60.714	ENSAMXG00000039016	-	83	60.714
ENSAMXG00000037709	-	89	61.905	ENSAMXG00000034847	-	92	61.905
ENSAMXG00000037709	-	90	65.079	ENSAMXG00000036567	-	80	65.079
ENSAMXG00000037709	-	86	62.343	ENSAMXG00000010930	-	76	62.343
ENSAMXG00000037709	-	79	38.519	ENSAMXG00000038235	snai2	54	38.519
ENSAMXG00000037709	-	90	67.619	ENSAMXG00000030911	-	68	67.619
ENSAMXG00000037709	-	88	57.588	ENSAMXG00000026144	-	93	57.588
ENSAMXG00000037709	-	90	38.636	ENSAMXG00000007441	-	67	37.696
ENSAMXG00000037709	-	87	60.317	ENSAMXG00000010805	-	99	60.317
ENSAMXG00000037709	-	82	60.938	ENSAMXG00000036915	-	96	60.938
ENSAMXG00000037709	-	81	56.061	ENSAMXG00000038122	-	93	56.061
ENSAMXG00000037709	-	97	43.750	ENSAMXG00000015228	-	59	43.750
ENSAMXG00000037709	-	94	64.659	ENSAMXG00000043423	-	82	64.659
ENSAMXG00000037709	-	86	56.596	ENSAMXG00000032212	-	87	56.596
ENSAMXG00000037709	-	90	53.285	ENSAMXG00000038905	-	95	53.285
ENSAMXG00000037709	-	81	45.133	ENSAMXG00000041862	-	95	59.091
ENSAMXG00000037709	-	94	59.921	ENSAMXG00000033201	-	98	59.921
ENSAMXG00000037709	-	94	62.400	ENSAMXG00000036849	-	91	62.400
ENSAMXG00000037709	-	82	59.009	ENSAMXG00000030530	-	98	59.009
ENSAMXG00000037709	-	89	55.253	ENSAMXG00000030659	-	85	55.253
ENSAMXG00000037709	-	83	63.889	ENSAMXG00000031900	-	95	63.889
ENSAMXG00000037709	-	81	38.247	ENSAMXG00000024907	znf319b	85	35.862
ENSAMXG00000037709	-	88	43.284	ENSAMXG00000006669	GFI1	60	43.284
ENSAMXG00000037709	-	89	61.628	ENSAMXG00000039977	-	96	61.628
ENSAMXG00000037709	-	90	60.563	ENSAMXG00000041721	-	78	60.563
ENSAMXG00000037709	-	91	61.658	ENSAMXG00000041609	-	99	59.127
ENSAMXG00000037709	-	82	61.053	ENSAMXG00000035683	-	96	60.526
ENSAMXG00000037709	-	90	59.108	ENSAMXG00000036241	-	92	59.108
ENSAMXG00000037709	-	86	63.306	ENSAMXG00000000353	-	99	63.306
ENSAMXG00000037709	-	82	32.812	ENSAMXG00000035525	znf646	83	33.594
ENSAMXG00000037709	-	93	57.055	ENSAMXG00000034096	-	93	57.055
ENSAMXG00000037709	-	86	59.259	ENSAMXG00000042633	-	96	59.259
ENSAMXG00000037709	-	81	60.145	ENSAMXG00000033013	-	81	60.145
ENSAMXG00000037709	-	97	63.889	ENSAMXG00000031009	-	84	63.889
ENSAMXG00000037709	-	86	66.265	ENSAMXG00000024978	-	96	66.265
ENSAMXG00000037709	-	86	56.757	ENSAMXG00000036257	-	93	56.757
ENSAMXG00000037709	-	78	37.895	ENSAMXG00000029059	-	63	37.500
ENSAMXG00000037709	-	88	63.200	ENSAMXG00000040630	-	99	63.200
ENSAMXG00000037709	-	94	56.627	ENSAMXG00000029783	-	97	56.627
ENSAMXG00000037709	-	94	62.551	ENSAMXG00000017609	-	82	62.551
ENSAMXG00000037709	-	87	58.289	ENSAMXG00000030963	-	74	58.289
ENSAMXG00000037709	-	82	65.873	ENSAMXG00000039744	-	99	65.873
ENSAMXG00000037709	-	86	65.041	ENSAMXG00000007092	-	98	65.041
ENSAMXG00000037709	-	81	63.000	ENSAMXG00000004610	-	96	63.000
ENSAMXG00000037709	-	91	61.739	ENSAMXG00000031496	-	90	61.739
ENSAMXG00000037709	-	89	56.800	ENSAMXG00000039770	-	92	56.800
ENSAMXG00000037709	-	86	55.705	ENSAMXG00000039182	-	79	60.669
ENSAMXG00000037709	-	86	65.068	ENSAMXG00000041865	-	98	65.068
ENSAMXG00000037709	-	93	60.317	ENSAMXG00000035437	-	100	60.317
ENSAMXG00000037709	-	83	55.000	ENSAMXG00000034344	-	79	55.000
ENSAMXG00000037709	-	90	61.472	ENSAMXG00000042275	-	97	61.472
ENSAMXG00000037709	-	86	39.286	ENSAMXG00000044034	-	84	39.286
ENSAMXG00000037709	-	88	59.155	ENSAMXG00000031844	-	96	59.155
ENSAMXG00000037709	-	89	63.492	ENSAMXG00000035690	-	75	63.492
ENSAMXG00000037709	-	91	52.525	ENSAMXG00000038280	-	89	55.952
ENSAMXG00000037709	-	86	65.873	ENSAMXG00000039879	-	98	65.873
ENSAMXG00000037709	-	91	60.870	ENSAMXG00000037717	-	96	60.870
ENSAMXG00000037709	-	86	66.376	ENSAMXG00000036762	-	98	66.376
ENSAMXG00000037709	-	80	40.930	ENSAMXG00000042191	zbtb47a	75	40.930
ENSAMXG00000037709	-	97	59.859	ENSAMXG00000042938	-	95	59.859
ENSAMXG00000037709	-	87	54.331	ENSAMXG00000034857	-	68	54.331
ENSAMXG00000037709	-	90	58.421	ENSAMXG00000041650	-	98	58.421
ENSAMXG00000037709	-	86	63.755	ENSAMXG00000009776	-	98	63.755
ENSAMXG00000037709	-	90	63.043	ENSAMXG00000040212	-	92	63.043
ENSAMXG00000037709	-	85	59.848	ENSAMXG00000036233	-	81	59.848
ENSAMXG00000037709	-	94	58.031	ENSAMXG00000037981	-	78	58.031
ENSAMXG00000037709	-	95	59.921	ENSAMXG00000040677	-	94	59.921
ENSAMXG00000037709	-	85	65.863	ENSAMXG00000011804	-	86	65.863
ENSAMXG00000037709	-	81	66.225	ENSAMXG00000041128	-	89	66.225
ENSAMXG00000037709	-	90	58.824	ENSAMXG00000040806	-	94	58.824
ENSAMXG00000037709	-	94	47.253	ENSAMXG00000014745	-	83	45.366
ENSAMXG00000037709	-	81	61.574	ENSAMXG00000001626	-	89	61.574
ENSAMXG00000037709	-	81	61.224	ENSAMXG00000044028	-	95	60.338
ENSAMXG00000037709	-	89	73.256	ENSAMXG00000009558	-	93	73.256
ENSAMXG00000037709	-	82	56.195	ENSAMXG00000036633	-	62	58.333
ENSAMXG00000037709	-	95	53.261	ENSAMXG00000042174	-	93	55.159
ENSAMXG00000037709	-	86	62.025	ENSAMXG00000038284	-	93	62.025
ENSAMXG00000037709	-	89	60.241	ENSAMXG00000032237	-	97	60.241
ENSAMXG00000037709	-	85	41.667	ENSAMXG00000034873	-	80	43.023
ENSAMXG00000037709	-	86	48.500	ENSAMXG00000043178	-	75	48.500
ENSAMXG00000037709	-	90	65.476	ENSAMXG00000018161	-	96	65.476
ENSAMXG00000037709	-	87	59.921	ENSAMXG00000042746	-	89	59.921

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000037709	-	94	42.449	ENSAPEG00000021575	-	66	42.449	Amphiprion_percula
ENSAMXG00000037709	-	86	47.273	ENSACLG00000017925	-	69	40.741	Astatotilapia_calliptera
ENSAMXG00000037709	-	87	54.762	ENSCSAVG00000007918	-	100	54.762	Ciona_savignyi
ENSAMXG00000037709	-	83	47.552	ENSHBUG00000012007	-	71	47.552	Haplochromis_burtoni
ENSAMXG00000037709	-	82	50.331	ENSHBUG00000002307	-	81	50.331	Haplochromis_burtoni
ENSAMXG00000037709	-	86	47.273	ENSMZEG00005024424	-	69	40.741	Maylandia_zebra
ENSAMXG00000037709	-	94	43.750	ENSOANG00000005971	-	68	41.199	Ornithorhynchus_anatinus
ENSAMXG00000037709	-	93	43.243	ENSPMEG00000014701	-	68	42.958	Poecilia_mexicana
ENSAMXG00000037709	-	85	44.286	ENSSDUG00000002174	-	68	44.286	Seriola_dumerili
ENSAMXG00000037709	-	94	44.286	ENSSLDG00000002776	-	73	44.286	Seriola_lalandi_dorsalis
ENSAMXG00000037709	-	88	51.282	ENSSLDG00000010390	-	87	51.282	Seriola_lalandi_dorsalis
ENSAMXG00000037709	-	86	43.571	ENSSPAG00000008958	-	92	42.128	Stegastes_partitus
ENSAMXG00000037709	-	90	51.220	ENSTGUG00000015090	-	100	51.220	Taeniopygia_guttata