EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000037730 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 2598 bases
Position: chr24:13999011-14001608
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000033833	RRM_1	PF00076.22	6.7e-35	1	2
ENSAMXP00000033833	RRM_1	PF00076.22	6.7e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000047970	-	1023	-	ENSAMXP00000033833	340 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000037730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000037730's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000037730	-	64	36.239	ENSAMXG00000032796	msi2a	60	36.145
ENSAMXG00000037730	-	83	32.042	ENSAMXG00000001495	hnrnpdl	55	34.706
ENSAMXG00000037730	-	63	36.321	ENSAMXG00000039814	hnrnpabb	55	35.165
ENSAMXG00000037730	-	58	36.041	ENSAMXG00000001477	hnrnpd	54	35.260
ENSAMXG00000037730	-	88	32.343	ENSAMXG00000010474	msi2b	55	38.235
ENSAMXG00000037730	-	53	60.000	ENSAMXG00000006296	hnrnpa1a	52	57.949
ENSAMXG00000037730	-	64	31.278	ENSAMXG00000002560	hnrnpaba	52	35.294
ENSAMXG00000037730	-	56	32.692	ENSAMXG00000030795	tardbpl	55	35.897

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000037730	-	56	63.351	ENSAPOG00000019369	-	55	63.277	Acanthochromis_polyacanthus
ENSAMXG00000037730	-	52	71.910	ENSACIG00000021815	-	86	72.571	Amphilophus_citrinellus
ENSAMXG00000037730	-	56	63.351	ENSAOCG00000005289	-	54	63.277	Amphiprion_ocellaris
ENSAMXG00000037730	-	56	63.351	ENSAPEG00000004179	-	54	63.277	Amphiprion_percula
ENSAMXG00000037730	-	56	62.632	ENSATEG00000022918	hnrnpa1a	85	63.277	Anabas_testudineus
ENSAMXG00000037730	-	51	81.761	ENSATEG00000003423	-	75	81.761	Anabas_testudineus
ENSAMXG00000037730	-	63	58.796	ENSACLG00000006940	-	54	63.277	Astatotilapia_calliptera
ENSAMXG00000037730	-	54	71.271	ENSCSEG00000014051	-	71	72.989	Cynoglossus_semilaevis
ENSAMXG00000037730	-	63	57.014	ENSCSEG00000007589	hnrnpa1a	67	61.017	Cynoglossus_semilaevis
ENSAMXG00000037730	-	64	57.407	ENSCVAG00000012637	hnrnpa1a	54	63.842	Cyprinodon_variegatus
ENSAMXG00000037730	-	66	80.337	ENSGMOG00000020353	-	93	80.571	Gadus_morhua
ENSAMXG00000037730	-	64	58.824	ENSGAFG00000007751	-	53	63.842	Gambusia_affinis
ENSAMXG00000037730	-	52	72.727	ENSGAFG00000016803	-	53	72.727	Gambusia_affinis
ENSAMXG00000037730	-	63	58.796	ENSHBUG00000005647	hnrnpa1a	54	63.277	Haplochromis_burtoni
ENSAMXG00000037730	-	55	56.989	ENSIPUG00000022440	-	70	59.146	Ictalurus_punctatus
ENSAMXG00000037730	-	57	56.186	ENSIPUG00000002023	hnrnpa1a	76	60.000	Ictalurus_punctatus
ENSAMXG00000037730	-	54	84.270	ENSIPUG00000001991	-	75	84.659	Ictalurus_punctatus
ENSAMXG00000037730	-	53	62.011	ENSKMAG00000020859	-	54	62.712	Kryptolebias_marmoratus
ENSAMXG00000037730	-	56	61.905	ENSLBEG00000010010	hnrnpa1a	53	63.842	Labrus_bergylta
ENSAMXG00000037730	-	56	62.500	ENSMAMG00000007606	-	53	63.842	Mastacembelus_armatus
ENSAMXG00000037730	-	63	58.796	ENSMZEG00005027173	hnrnpa1a	54	63.277	Maylandia_zebra
ENSAMXG00000037730	-	54	62.637	ENSMMOG00000008251	hnrnpa1a	75	63.277	Mola_mola
ENSAMXG00000037730	-	86	53.618	ENSMALG00000014091	hnrnpa1a	53	63.277	Monopterus_albus
ENSAMXG00000037730	-	52	73.295	ENSMALG00000008886	-	86	72.881	Monopterus_albus
ENSAMXG00000037730	-	53	81.818	ENSNBRG00000014469	-	82	81.818	Neolamprologus_brichardi
ENSAMXG00000037730	-	63	58.796	ENSNBRG00000018441	-	55	63.277	Neolamprologus_brichardi
ENSAMXG00000037730	-	85	54.795	ENSORLG00000008001	-	55	63.277	Oryzias_latipes
ENSAMXG00000037730	-	64	57.407	ENSORLG00000029240	-	94	60.452	Oryzias_latipes
ENSAMXG00000037730	-	64	56.481	ENSORLG00020022498	-	80	61.017	Oryzias_latipes_hni
ENSAMXG00000037730	-	93	50.470	ENSORLG00020006043	-	63	61.081	Oryzias_latipes_hni
ENSAMXG00000037730	-	85	54.795	ENSORLG00020006582	hnrnpa1a	82	63.636	Oryzias_latipes_hni
ENSAMXG00000037730	-	85	54.795	ENSORLG00015022294	-	55	63.277	Oryzias_latipes_hsok
ENSAMXG00000037730	-	86	54.082	ENSOMEG00000015959	-	55	63.277	Oryzias_melastigma
ENSAMXG00000037730	-	53	62.222	ENSPMGG00000011804	hnrnpa1a	73	62.712	Periophthalmus_magnuspinnatus
ENSAMXG00000037730	-	56	73.118	ENSPMGG00000016392	-	93	77.457	Periophthalmus_magnuspinnatus
ENSAMXG00000037730	-	56	63.351	ENSPFOG00000001825	-	54	63.842	Poecilia_formosa
ENSAMXG00000037730	-	56	63.351	ENSPMEG00000002425	-	54	63.842	Poecilia_mexicana
ENSAMXG00000037730	-	53	81.818	ENSPNYG00000020729	-	90	81.818	Pundamilia_nyererei
ENSAMXG00000037730	-	55	60.638	ENSPNAG00000021630	-	55	61.582	Pygocentrus_nattereri
ENSAMXG00000037730	-	54	58.696	ENSPNAG00000007752	hnrnpa1a	74	58.378	Pygocentrus_nattereri
ENSAMXG00000037730	-	52	78.313	ENSSMAG00000010279	-	93	78.313	Scophthalmus_maximus
ENSAMXG00000037730	-	51	72.989	ENSSMAG00000010246	-	78	72.571	Scophthalmus_maximus
ENSAMXG00000037730	-	53	61.453	ENSSMAG00000004641	hnrnpa1a	70	61.582	Scophthalmus_maximus
ENSAMXG00000037730	-	85	51.034	ENSSDUG00000013908	hnrnpa1a	82	63.842	Seriola_dumerili
ENSAMXG00000037730	-	53	79.191	ENSSDUG00000002431	-	82	79.191	Seriola_dumerili
ENSAMXG00000037730	-	66	54.978	ENSSLDG00000003718	hnrnpa1a	91	57.522	Seriola_lalandi_dorsalis
ENSAMXG00000037730	-	86	53.898	ENSSPAG00000018518	-	55	63.277	Stegastes_partitus
ENSAMXG00000037730	-	63	56.808	ENSTRUG00000020491	-	55	61.582	Takifugu_rubripes
ENSAMXG00000037730	-	69	68.534	ENSTNIG00000007398	-	69	80.226	Tetraodon_nigroviridis
ENSAMXG00000037730	-	53	62.778	ENSXCOG00000009001	-	78	63.277	Xiphophorus_couchianus
ENSAMXG00000037730	-	56	62.827	ENSXMAG00000008076	-	53	63.277	Xiphophorus_maculatus