EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000037791 (Gene tree)
Gene ID: 103028553
Gene Symbol: yrdc
Alias: zgc:162301
Full Name: yrdC N6-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 7463 bases
Position: chr10:20056163-20063625
Accession: 103028553
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000043277	Sua5_yciO_yrdC	PF01300.18	4.4e-52	1	1
ENSAMXP00000032552	Sua5_yciO_yrdC	PF01300.18	5.9e-52	1	1
ENSAMXP00000041724	Sua5_yciO_yrdC	PF01300.18	6e-52	1	1
ENSAMXP00000049280	Sua5_yciO_yrdC	PF01300.18	6.2e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000037393	-	4915	-	ENSAMXP00000043277	242 (aa)	-	-
ENSAMXT00000052193	-	3603	-	ENSAMXP00000049280	276 (aa)	-	-
ENSAMXT00000034205	-	3795	-	ENSAMXP00000032552	274 (aa)	-	-
ENSAMXT00000032596	-	4290	XM_015605865	ENSAMXP00000041724	263 (aa)	XP_015461351	UPI000BBDD37A

Gene Model

Click here to download ENSAMXG00000037791's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000037791's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000037791	yrdc	86	58.621	ENSG00000196449	YRDC	83	58.621	Homo_sapiens
ENSAMXG00000037791	yrdc	89	76.068	ENSAPOG00000024293	yrdc	90	76.068	Acanthochromis_polyacanthus
ENSAMXG00000037791	yrdc	68	65.761	ENSAMEG00000001173	YRDC	98	65.761	Ailuropoda_melanoleuca
ENSAMXG00000037791	yrdc	97	71.795	ENSACIG00000017330	yrdc	94	71.260	Amphilophus_citrinellus
ENSAMXG00000037791	yrdc	89	76.496	ENSAOCG00000021647	yrdc	90	76.496	Amphiprion_ocellaris
ENSAMXG00000037791	yrdc	89	76.068	ENSAPEG00000006164	yrdc	90	76.068	Amphiprion_percula
ENSAMXG00000037791	yrdc	88	76.636	ENSATEG00000010086	yrdc	86	75.652	Anabas_testudineus
ENSAMXG00000037791	yrdc	72	61.798	ENSACAG00000017203	YRDC	93	61.421	Anolis_carolinensis
ENSAMXG00000037791	yrdc	78	62.019	ENSANAG00000028788	-	89	62.019	Aotus_nancymaae
ENSAMXG00000037791	yrdc	86	55.983	ENSANAG00000031052	-	85	55.983	Aotus_nancymaae
ENSAMXG00000037791	yrdc	88	74.648	ENSACLG00000027775	yrdc	87	73.820	Astatotilapia_calliptera
ENSAMXG00000037791	yrdc	85	59.524	ENSBTAG00000006510	YRDC	84	58.190	Bos_taurus
ENSAMXG00000037791	yrdc	75	38.693	WBGene00012997	Y48C3A.18	97	40.171	Caenorhabditis_elegans
ENSAMXG00000037791	yrdc	86	58.621	ENSCJAG00000002078	YRDC	64	58.621	Callithrix_jacchus
ENSAMXG00000037791	yrdc	86	58.621	ENSCAFG00000003253	YRDC	85	58.621	Canis_familiaris
ENSAMXG00000037791	yrdc	86	59.483	ENSCAFG00020007843	YRDC	85	59.483	Canis_lupus_dingo
ENSAMXG00000037791	yrdc	85	60.952	ENSCHIG00000007882	YRDC	84	59.483	Capra_hircus
ENSAMXG00000037791	yrdc	65	63.636	ENSTSYG00000005555	YRDC	63	63.636	Carlito_syrichta
ENSAMXG00000037791	yrdc	85	60.952	ENSCPOG00000036144	YRDC	83	59.483	Cavia_porcellus
ENSAMXG00000037791	yrdc	86	58.621	ENSCCAG00000028891	YRDC	83	58.621	Cebus_capucinus
ENSAMXG00000037791	yrdc	86	56.897	ENSCATG00000036928	YRDC	83	58.190	Cercocebus_atys
ENSAMXG00000037791	yrdc	85	60.476	ENSCLAG00000015012	YRDC	83	59.052	Chinchilla_lanigera
ENSAMXG00000037791	yrdc	86	56.897	ENSCSAG00000001116	YRDC	83	58.190	Chlorocebus_sabaeus
ENSAMXG00000037791	yrdc	67	57.407	ENSCHOG00000005500	YRDC	78	57.407	Choloepus_hoffmanni
ENSAMXG00000037791	yrdc	77	66.184	ENSCPBG00000018446	YRDC	88	66.184	Chrysemys_picta_bellii
ENSAMXG00000037791	yrdc	76	49.528	ENSCING00000007564	-	97	49.528	Ciona_intestinalis
ENSAMXG00000037791	yrdc	76	47.368	ENSCSAVG00000009982	-	97	47.368	Ciona_savignyi
ENSAMXG00000037791	yrdc	86	57.328	ENSCANG00000031111	YRDC	83	58.621	Colobus_angolensis_palliatus
ENSAMXG00000037791	yrdc	86	53.017	ENSCGRG00001000829	-	64	53.017	Cricetulus_griseus_chok1gshd
ENSAMXG00000037791	yrdc	86	58.190	ENSCGRG00001014496	-	83	58.190	Cricetulus_griseus_chok1gshd
ENSAMXG00000037791	yrdc	94	63.100	ENSCSEG00000019075	yrdc	96	63.100	Cynoglossus_semilaevis
ENSAMXG00000037791	yrdc	88	72.430	ENSCVAG00000017355	yrdc	87	72.174	Cyprinodon_variegatus
ENSAMXG00000037791	yrdc	89	75.745	ENSDARG00000041428	yrdc	98	75.745	Danio_rerio
ENSAMXG00000037791	yrdc	85	59.242	ENSDNOG00000038789	-	82	59.242	Dasypus_novemcinctus
ENSAMXG00000037791	yrdc	72	48.718	ENSDNOG00000036198	-	94	48.718	Dasypus_novemcinctus
ENSAMXG00000037791	yrdc	79	59.722	ENSDORG00000008788	Yrdc	96	59.722	Dipodomys_ordii
ENSAMXG00000037791	yrdc	73	52.198	FBgn0061361	CG33786	80	50.000	Drosophila_melanogaster
ENSAMXG00000037791	yrdc	85	43.556	ENSETEG00000003442	YRDC	86	44.215	Echinops_telfairi
ENSAMXG00000037791	yrdc	87	52.113	ENSEBUG00000014080	yrdc	97	51.293	Eptatretus_burgeri
ENSAMXG00000037791	yrdc	78	63.942	ENSEASG00005012253	YRDC	74	63.942	Equus_asinus_asinus
ENSAMXG00000037791	yrdc	85	60.952	ENSECAG00000022522	YRDC	83	59.914	Equus_caballus
ENSAMXG00000037791	yrdc	90	75.566	ENSELUG00000018071	yrdc	84	71.595	Esox_lucius
ENSAMXG00000037791	yrdc	86	59.052	ENSFCAG00000011018	YRDC	83	59.052	Felis_catus
ENSAMXG00000037791	yrdc	72	67.526	ENSFALG00000000964	YRDC	90	67.005	Ficedula_albicollis
ENSAMXG00000037791	yrdc	93	67.699	ENSFHEG00000001029	yrdc	90	67.841	Fundulus_heteroclitus
ENSAMXG00000037791	yrdc	77	79.144	ENSGMOG00000015635	yrdc	99	78.049	Gadus_morhua
ENSAMXG00000037791	yrdc	86	61.905	ENSGALG00000029001	YRDC	86	61.905	Gallus_gallus
ENSAMXG00000037791	yrdc	89	70.085	ENSGAFG00000008396	yrdc	88	70.085	Gambusia_affinis
ENSAMXG00000037791	yrdc	88	72.936	ENSGACG00000013878	yrdc	99	70.833	Gasterosteus_aculeatus
ENSAMXG00000037791	yrdc	77	65.700	ENSGAGG00000014968	YRDC	90	65.700	Gopherus_agassizii
ENSAMXG00000037791	yrdc	86	58.621	ENSGGOG00000007619	YRDC	83	58.621	Gorilla_gorilla
ENSAMXG00000037791	yrdc	88	75.587	ENSHBUG00000009298	yrdc	87	74.249	Haplochromis_burtoni
ENSAMXG00000037791	yrdc	86	59.483	ENSHGLG00000014075	YRDC	83	59.483	Heterocephalus_glaber_female
ENSAMXG00000037791	yrdc	78	63.462	ENSHGLG00100002734	YRDC	75	63.462	Heterocephalus_glaber_male
ENSAMXG00000037791	yrdc	88	73.832	ENSHCOG00000006598	yrdc	90	73.478	Hippocampus_comes
ENSAMXG00000037791	yrdc	91	80.417	ENSIPUG00000014985	yrdc	99	80.417	Ictalurus_punctatus
ENSAMXG00000037791	yrdc	86	59.483	ENSSTOG00000001643	YRDC	83	59.483	Ictidomys_tridecemlineatus
ENSAMXG00000037791	yrdc	89	73.504	ENSKMAG00000013468	yrdc	88	73.504	Kryptolebias_marmoratus
ENSAMXG00000037791	yrdc	98	69.492	ENSLBEG00000027501	yrdc	95	69.922	Labrus_bergylta
ENSAMXG00000037791	yrdc	99	56.349	ENSLACG00000010689	YRDC	94	65.854	Latimeria_chalumnae
ENSAMXG00000037791	yrdc	77	32.093	ENSLACG00000017624	si:ch211-153b23.3	64	32.093	Latimeria_chalumnae
ENSAMXG00000037791	yrdc	88	69.231	ENSLOCG00000003321	yrdc	97	68.908	Lepisosteus_oculatus
ENSAMXG00000037791	yrdc	85	60.000	ENSLAFG00000017556	YRDC	81	59.912	Loxodonta_africana
ENSAMXG00000037791	yrdc	78	60.577	ENSMFAG00000003487	YRDC	98	62.019	Macaca_fascicularis
ENSAMXG00000037791	yrdc	86	56.897	ENSMMUG00000005372	YRDC	62	58.190	Macaca_mulatta
ENSAMXG00000037791	yrdc	86	56.897	ENSMNEG00000029348	YRDC	83	58.190	Macaca_nemestrina
ENSAMXG00000037791	yrdc	55	63.087	ENSMLEG00000041122	YRDC	99	65.101	Mandrillus_leucophaeus
ENSAMXG00000037791	yrdc	88	75.576	ENSMAMG00000007315	yrdc	87	75.107	Mastacembelus_armatus
ENSAMXG00000037791	yrdc	88	74.648	ENSMZEG00005006948	yrdc	87	73.820	Maylandia_zebra
ENSAMXG00000037791	yrdc	76	66.341	ENSMGAG00000002833	YRDC	100	66.341	Meleagris_gallopavo
ENSAMXG00000037791	yrdc	86	58.621	ENSMICG00000031688	YRDC	83	58.621	Microcebus_murinus
ENSAMXG00000037791	yrdc	86	49.123	ENSMOCG00000000164	-	82	49.123	Microtus_ochrogaster
ENSAMXG00000037791	yrdc	89	72.650	ENSMMOG00000002119	yrdc	88	72.650	Mola_mola
ENSAMXG00000037791	yrdc	75	65.591	ENSMODG00000017750	YRDC	72	64.532	Monodelphis_domestica
ENSAMXG00000037791	yrdc	89	75.349	ENSMALG00000012471	yrdc	87	74.892	Monopterus_albus
ENSAMXG00000037791	yrdc	85	59.524	MGP_CAROLIEiJ_G0026453	Yrdc	98	67.961	Mus_caroli
ENSAMXG00000037791	yrdc	85	60.000	ENSMUSG00000028889	Yrdc	100	68.571	Mus_musculus
ENSAMXG00000037791	yrdc	88	58.723	MGP_PahariEiJ_G0028784	Yrdc	100	68.571	Mus_pahari
ENSAMXG00000037791	yrdc	85	59.524	MGP_SPRETEiJ_G0027432	Yrdc	83	58.190	Mus_spretus
ENSAMXG00000037791	yrdc	76	64.039	ENSMPUG00000014542	YRDC	81	64.039	Mustela_putorius_furo
ENSAMXG00000037791	yrdc	72	60.104	ENSMLUG00000024310	-	95	60.104	Myotis_lucifugus
ENSAMXG00000037791	yrdc	77	51.942	ENSMLUG00000028796	-	73	51.942	Myotis_lucifugus
ENSAMXG00000037791	yrdc	85	59.048	ENSMLUG00000000955	-	81	58.590	Myotis_lucifugus
ENSAMXG00000037791	yrdc	78	61.538	ENSNGAG00000019099	Yrdc	74	61.538	Nannospalax_galili
ENSAMXG00000037791	yrdc	89	74.678	ENSNBRG00000009475	yrdc	88	74.678	Neolamprologus_brichardi
ENSAMXG00000037791	yrdc	86	58.621	ENSNLEG00000011665	YRDC	83	58.621	Nomascus_leucogenys
ENSAMXG00000037791	yrdc	78	62.981	ENSMEUG00000005068	YRDC	97	62.981	Notamacropus_eugenii
ENSAMXG00000037791	yrdc	85	60.000	ENSODEG00000007401	YRDC	100	67.619	Octodon_degus
ENSAMXG00000037791	yrdc	88	75.234	ENSONIG00000016213	yrdc	98	73.932	Oreochromis_niloticus
ENSAMXG00000037791	yrdc	85	60.000	ENSOCUG00000005384	YRDC	77	59.735	Oryctolagus_cuniculus
ENSAMXG00000037791	yrdc	89	70.042	ENSORLG00000014393	yrdc	89	70.042	Oryzias_latipes
ENSAMXG00000037791	yrdc	89	69.658	ENSORLG00020019663	yrdc	89	69.658	Oryzias_latipes_hni
ENSAMXG00000037791	yrdc	89	69.658	ENSORLG00015004625	yrdc	89	69.658	Oryzias_latipes_hsok
ENSAMXG00000037791	yrdc	92	69.820	ENSOMEG00000018550	yrdc	92	69.295	Oryzias_melastigma
ENSAMXG00000037791	yrdc	85	59.524	ENSOGAG00000030474	YRDC	83	59.031	Otolemur_garnettii
ENSAMXG00000037791	yrdc	85	60.952	ENSOARG00000019873	YRDC	83	59.483	Ovis_aries
ENSAMXG00000037791	yrdc	54	65.986	ENSPPAG00000039722	-	99	65.986	Pan_paniscus
ENSAMXG00000037791	yrdc	86	59.052	ENSPPRG00000007752	YRDC	83	59.052	Panthera_pardus
ENSAMXG00000037791	yrdc	75	51.852	ENSPTIG00000019821	YRDC	91	51.852	Panthera_tigris_altaica
ENSAMXG00000037791	yrdc	86	58.621	ENSPTRG00000000557	YRDC	83	58.621	Pan_troglodytes
ENSAMXG00000037791	yrdc	86	56.897	ENSPANG00000006487	YRDC	63	58.190	Papio_anubis
ENSAMXG00000037791	yrdc	99	63.636	ENSPKIG00000004574	yrdc	95	63.320	Paramormyrops_kingsleyae
ENSAMXG00000037791	yrdc	78	67.943	ENSPSIG00000006483	YRDC	74	67.943	Pelodiscus_sinensis
ENSAMXG00000037791	yrdc	93	69.264	ENSPMGG00000004184	yrdc	98	68.127	Periophthalmus_magnuspinnatus
ENSAMXG00000037791	yrdc	66	62.360	ENSPEMG00000016985	Yrdc	78	62.360	Peromyscus_maniculatus_bairdii
ENSAMXG00000037791	yrdc	71	57.627	ENSPMAG00000002905	yrdc	96	57.627	Petromyzon_marinus
ENSAMXG00000037791	yrdc	76	63.547	ENSPCIG00000025731	YRDC	73	63.547	Phascolarctos_cinereus
ENSAMXG00000037791	yrdc	89	69.658	ENSPFOG00000023097	yrdc	88	69.658	Poecilia_formosa
ENSAMXG00000037791	yrdc	89	69.231	ENSPLAG00000020882	yrdc	88	69.231	Poecilia_latipinna
ENSAMXG00000037791	yrdc	89	69.658	ENSPMEG00000013237	yrdc	88	69.658	Poecilia_mexicana
ENSAMXG00000037791	yrdc	92	68.033	ENSPREG00000005285	yrdc	91	68.033	Poecilia_reticulata
ENSAMXG00000037791	yrdc	76	63.547	ENSPPYG00000001523	-	83	63.547	Pongo_abelii
ENSAMXG00000037791	yrdc	86	60.000	ENSPCAG00000016850	YRDC	82	60.000	Procavia_capensis
ENSAMXG00000037791	yrdc	86	59.052	ENSPCOG00000013214	YRDC	83	59.052	Propithecus_coquereli
ENSAMXG00000037791	yrdc	85	58.571	ENSPVAG00000010147	YRDC	81	58.590	Pteropus_vampyrus
ENSAMXG00000037791	yrdc	88	75.117	ENSPNYG00000013956	yrdc	87	73.820	Pundamilia_nyererei
ENSAMXG00000037791	yrdc	100	81.818	ENSPNAG00000015625	yrdc	100	81.818	Pygocentrus_nattereri
ENSAMXG00000037791	yrdc	78	63.462	ENSRNOG00000025424	Yrdc	83	59.052	Rattus_norvegicus
ENSAMXG00000037791	yrdc	86	57.576	ENSRBIG00000032289	YRDC	83	58.190	Rhinopithecus_bieti
ENSAMXG00000037791	yrdc	78	60.577	ENSRROG00000039370	YRDC	71	62.019	Rhinopithecus_roxellana
ENSAMXG00000037791	yrdc	77	62.621	ENSSBOG00000018937	YRDC	88	62.621	Saimiri_boliviensis_boliviensis
ENSAMXG00000037791	yrdc	54	67.586	ENSSHAG00000013957	-	98	67.586	Sarcophilus_harrisii
ENSAMXG00000037791	yrdc	81	75.253	ENSSFOG00015006128	yrdc	93	72.146	Scleropages_formosus
ENSAMXG00000037791	yrdc	89	72.222	ENSSMAG00000005195	yrdc	89	72.222	Scophthalmus_maximus
ENSAMXG00000037791	yrdc	58	33.333	ENSSDUG00000006736	-	77	33.333	Seriola_dumerili
ENSAMXG00000037791	yrdc	89	76.068	ENSSDUG00000009775	yrdc	88	76.068	Seriola_dumerili
ENSAMXG00000037791	yrdc	53	32.353	ENSSDUG00000006631	-	64	31.538	Seriola_dumerili
ENSAMXG00000037791	yrdc	92	75.225	ENSSLDG00000003196	yrdc	97	70.656	Seriola_lalandi_dorsalis
ENSAMXG00000037791	yrdc	53	31.538	ENSSLDG00000008694	-	63	31.538	Seriola_lalandi_dorsalis
ENSAMXG00000037791	yrdc	78	67.143	ENSSPUG00000003946	YRDC	81	67.143	Sphenodon_punctatus
ENSAMXG00000037791	yrdc	89	74.786	ENSSPAG00000012559	yrdc	88	74.786	Stegastes_partitus
ENSAMXG00000037791	yrdc	85	61.905	ENSSSCG00000040425	YRDC	83	59.914	Sus_scrofa
ENSAMXG00000037791	yrdc	54	69.388	ENSTGUG00000001507	YRDC	100	69.388	Taeniopygia_guttata
ENSAMXG00000037791	yrdc	99	61.508	ENSTRUG00000005923	yrdc	99	61.029	Takifugu_rubripes
ENSAMXG00000037791	yrdc	60	66.000	ENSTBEG00000008863	YRDC	96	66.000	Tupaia_belangeri
ENSAMXG00000037791	yrdc	52	68.310	ENSTTRG00000013538	-	95	68.310	Tursiops_truncatus
ENSAMXG00000037791	yrdc	74	66.667	ENSUAMG00000006150	YRDC	99	66.000	Ursus_americanus
ENSAMXG00000037791	yrdc	85	48.571	ENSVPAG00000006642	YRDC	97	48.899	Vicugna_pacos
ENSAMXG00000037791	yrdc	56	64.667	ENSVVUG00000023132	-	50	64.667	Vulpes_vulpes
ENSAMXG00000037791	yrdc	78	66.346	ENSXETG00000014420	yrdc	87	66.346	Xenopus_tropicalis
ENSAMXG00000037791	yrdc	89	68.376	ENSXCOG00000000829	yrdc	98	68.376	Xiphophorus_couchianus
ENSAMXG00000037791	yrdc	89	70.085	ENSXMAG00000014606	yrdc	83	70.085	Xiphophorus_maculatus