EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000037893 (Gene tree)
Gene ID: -
Gene Symbol: rrs1
Alias: fj66c04|wu:fj66c04|zgc:66358
Full Name: RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 3667 bases
Position: chr3:20912007-20915673
Accession: ZDB-GENE-030131-9345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000033390	RRS1	PF04939.12	4.1e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000034241	-	2467	-	ENSAMXP00000033390	384 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000037893's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000037893's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000037893	rrs1	79	65.246	ENSG00000179041	RRS1	84	65.246	Homo_sapiens
ENSAMXG00000037893	rrs1	85	70.245	ENSATEG00000011743	rrs1	93	70.642	Anabas_testudineus
ENSAMXG00000037893	rrs1	86	63.855	ENSANAG00000018116	RRS1	84	65.902	Aotus_nancymaae
ENSAMXG00000037893	rrs1	86	63.554	ENSBTAG00000016716	RRS1	84	65.902	Bos_taurus
ENSAMXG00000037893	rrs1	83	41.369	WBGene00007617	rrbs-1	99	41.369	Caenorhabditis_elegans
ENSAMXG00000037893	rrs1	86	64.048	ENSCJAG00000022034	RRS1	84	66.557	Callithrix_jacchus
ENSAMXG00000037893	rrs1	79	66.230	ENSCAFG00000007313	RRS1	84	66.230	Canis_familiaris
ENSAMXG00000037893	rrs1	79	66.230	ENSCAFG00020020365	-	84	66.230	Canis_lupus_dingo
ENSAMXG00000037893	rrs1	79	66.230	ENSCAFG00020016049	-	84	66.230	Canis_lupus_dingo
ENSAMXG00000037893	rrs1	79	65.902	ENSCHIG00000009141	RRS1	84	65.902	Capra_hircus
ENSAMXG00000037893	rrs1	86	63.444	ENSCPOG00000000647	RRS1	87	65.064	Cavia_porcellus
ENSAMXG00000037893	rrs1	86	63.855	ENSCCAG00000032186	RRS1	84	65.902	Cebus_capucinus
ENSAMXG00000037893	rrs1	79	66.230	ENSCATG00000016944	RRS1	84	66.230	Cercocebus_atys
ENSAMXG00000037893	rrs1	91	60.331	ENSCSAG00000018552	RRS1	84	65.902	Chlorocebus_sabaeus
ENSAMXG00000037893	rrs1	79	66.230	ENSCHOG00000002455	RRS1	84	66.230	Choloepus_hoffmanni
ENSAMXG00000037893	rrs1	82	58.154	ENSCPBG00000021374	RRS1	91	57.812	Chrysemys_picta_bellii
ENSAMXG00000037893	rrs1	82	49.211	ENSCING00000002177	-	90	51.379	Ciona_intestinalis
ENSAMXG00000037893	rrs1	82	48.265	ENSCSAVG00000011819	-	90	50.690	Ciona_savignyi
ENSAMXG00000037893	rrs1	86	63.855	ENSCANG00000012718	RRS1	84	66.230	Colobus_angolensis_palliatus
ENSAMXG00000037893	rrs1	91	60.331	ENSCGRG00001002391	-	84	65.147	Cricetulus_griseus_chok1gshd
ENSAMXG00000037893	rrs1	86	63.174	ENSCGRG00001015575	-	88	64.821	Cricetulus_griseus_chok1gshd
ENSAMXG00000037893	rrs1	78	58.863	ENSCSEG00000014750	rrs1	85	58.521	Cynoglossus_semilaevis
ENSAMXG00000037893	rrs1	79	61.842	ENSCVAG00000017878	rrs1	87	62.092	Cyprinodon_variegatus
ENSAMXG00000037893	rrs1	78	76.333	ENSDARG00000003941	rrs1	100	72.159	Danio_rerio
ENSAMXG00000037893	rrs1	80	65.595	ENSDNOG00000017900	RRS1	84	65.595	Dasypus_novemcinctus
ENSAMXG00000037893	rrs1	57	66.364	ENSDORG00000026331	Rrs1	79	67.943	Dipodomys_ordii
ENSAMXG00000037893	rrs1	86	45.058	FBgn0052409	CG32409	91	45.794	Drosophila_melanogaster
ENSAMXG00000037893	rrs1	51	65.152	ENSETEG00000000935	-	54	65.152	Echinops_telfairi
ENSAMXG00000037893	rrs1	78	56.333	ENSEBUG00000013506	rrs1	96	57.394	Eptatretus_burgeri
ENSAMXG00000037893	rrs1	79	66.230	ENSEASG00005001691	RRS1	84	66.230	Equus_asinus_asinus
ENSAMXG00000037893	rrs1	86	63.772	ENSECAG00000004492	RRS1	91	66.230	Equus_caballus
ENSAMXG00000037893	rrs1	82	64.669	ENSEEUG00000013719	RRS1	84	65.574	Erinaceus_europaeus
ENSAMXG00000037893	rrs1	79	65.359	ENSFCAG00000014332	RRS1	84	65.359	Felis_catus
ENSAMXG00000037893	rrs1	76	59.801	ENSGALG00000030890	RRS1	90	58.075	Gallus_gallus
ENSAMXG00000037893	rrs1	78	73.244	ENSGACG00000002969	rrs1	87	72.669	Gasterosteus_aculeatus
ENSAMXG00000037893	rrs1	82	57.716	ENSGAGG00000023718	RRS1	92	56.627	Gopherus_agassizii
ENSAMXG00000037893	rrs1	79	66.230	ENSGGOG00000026663	RRS1	84	66.230	Gorilla_gorilla
ENSAMXG00000037893	rrs1	86	63.142	ENSHGLG00000021423	RRS1	84	65.574	Heterocephalus_glaber_female
ENSAMXG00000037893	rrs1	86	63.142	ENSHGLG00100020640	RRS1	84	65.574	Heterocephalus_glaber_male
ENSAMXG00000037893	rrs1	90	66.282	ENSHCOG00000015358	rrs1	88	68.889	Hippocampus_comes
ENSAMXG00000037893	rrs1	91	69.602	ENSIPUG00000014412	rrs1	100	71.307	Ictalurus_punctatus
ENSAMXG00000037893	rrs1	91	60.989	ENSSTOG00000026310	RRS1	84	66.557	Ictidomys_tridecemlineatus
ENSAMXG00000037893	rrs1	79	65.246	ENSJJAG00000011507	-	83	65.246	Jaculus_jaculus
ENSAMXG00000037893	rrs1	72	58.633	ENSJJAG00000020395	-	81	58.633	Jaculus_jaculus
ENSAMXG00000037893	rrs1	84	68.519	ENSKMAG00000008238	rrs1	92	70.607	Kryptolebias_marmoratus
ENSAMXG00000037893	rrs1	80	70.874	ENSLACG00000004058	RRS1	95	70.288	Latimeria_chalumnae
ENSAMXG00000037893	rrs1	91	70.455	ENSLOCG00000017812	rrs1	100	70.455	Lepisosteus_oculatus
ENSAMXG00000037893	rrs1	79	65.359	ENSLAFG00000015405	RRS1	83	65.359	Loxodonta_africana
ENSAMXG00000037893	rrs1	91	61.157	ENSMFAG00000042747	RRS1	92	63.690	Macaca_fascicularis
ENSAMXG00000037893	rrs1	91	61.157	ENSMMUG00000000886	RRS1	92	63.690	Macaca_mulatta
ENSAMXG00000037893	rrs1	91	61.157	ENSMNEG00000011696	RRS1	92	63.690	Macaca_nemestrina
ENSAMXG00000037893	rrs1	79	66.230	ENSMLEG00000004794	RRS1	84	66.230	Mandrillus_leucophaeus
ENSAMXG00000037893	rrs1	77	73.154	ENSMZEG00005004349	RRS1	87	72.026	Maylandia_zebra
ENSAMXG00000037893	rrs1	90	62.465	ENSMAUG00000005392	Rrs1	84	66.775	Mesocricetus_auratus
ENSAMXG00000037893	rrs1	86	62.757	ENSMOCG00000015862	Rrs1	80	65.798	Microtus_ochrogaster
ENSAMXG00000037893	rrs1	82	63.043	ENSMODG00000024952	RRS1	87	63.407	Monodelphis_domestica
ENSAMXG00000037893	rrs1	91	60.833	MGP_CAROLIEiJ_G0013936	Rrs1	84	65.902	Mus_caroli
ENSAMXG00000037893	rrs1	91	60.606	ENSMUSG00000061024	Rrs1	84	65.902	Mus_musculus
ENSAMXG00000037893	rrs1	85	62.424	MGP_PahariEiJ_G0023883	Rrs1	84	65.359	Mus_pahari
ENSAMXG00000037893	rrs1	91	60.606	MGP_SPRETEiJ_G0014739	Rrs1	84	65.902	Mus_spretus
ENSAMXG00000037893	rrs1	89	63.265	ENSMPUG00000018626	RRS1	83	65.472	Mustela_putorius_furo
ENSAMXG00000037893	rrs1	86	63.855	ENSNGAG00000012904	Rrs1	84	66.557	Nannospalax_galili
ENSAMXG00000037893	rrs1	72	60.490	ENSNLEG00000027730	RRS1	75	67.544	Nomascus_leucogenys
ENSAMXG00000037893	rrs1	84	70.154	ENSONIG00000014187	rrs1	90	71.704	Oreochromis_niloticus
ENSAMXG00000037893	rrs1	86	62.763	ENSOANG00000012348	RRS1	84	64.444	Ornithorhynchus_anatinus
ENSAMXG00000037893	rrs1	79	65.902	ENSOCUG00000013490	RRS1	83	65.902	Oryctolagus_cuniculus
ENSAMXG00000037893	rrs1	81	60.129	ENSOMEG00000008525	rrs1	88	60.129	Oryzias_melastigma
ENSAMXG00000037893	rrs1	83	64.596	ENSOGAG00000001085	RRS1	84	66.340	Otolemur_garnettii
ENSAMXG00000037893	rrs1	79	61.111	ENSOARG00000017417	RRS1	82	60.912	Ovis_aries
ENSAMXG00000037893	rrs1	79	65.902	ENSPPAG00000024378	RRS1	84	65.902	Pan_paniscus
ENSAMXG00000037893	rrs1	79	65.246	ENSPPRG00000021408	RRS1	84	65.246	Panthera_pardus
ENSAMXG00000037893	rrs1	79	65.574	ENSPTRG00000030988	RRS1	84	65.574	Pan_troglodytes
ENSAMXG00000037893	rrs1	89	46.328	ENSPANG00000035974	RRS1	80	50.165	Papio_anubis
ENSAMXG00000037893	rrs1	77	73.401	ENSPKIG00000007953	rrs1	90	73.139	Paramormyrops_kingsleyae
ENSAMXG00000037893	rrs1	85	63.222	ENSPEMG00000014427	Rrs1	84	66.124	Peromyscus_maniculatus_bairdii
ENSAMXG00000037893	rrs1	80	59.740	ENSPMAG00000006513	rrs1	84	59.306	Petromyzon_marinus
ENSAMXG00000037893	rrs1	79	63.192	ENSPCIG00000026695	RRS1	87	62.420	Phascolarctos_cinereus
ENSAMXG00000037893	rrs1	77	76.846	ENSPFOG00000020722	rrs1	96	75.884	Poecilia_formosa
ENSAMXG00000037893	rrs1	78	62.583	ENSPREG00000019960	rrs1	94	58.405	Poecilia_reticulata
ENSAMXG00000037893	rrs1	77	66.330	ENSPPYG00000018637	RRS1	100	66.330	Pongo_abelii
ENSAMXG00000037893	rrs1	84	64.417	ENSPCAG00000009115	RRS1	84	66.230	Procavia_capensis
ENSAMXG00000037893	rrs1	76	86.897	ENSPNAG00000021707	rrs1	100	82.621	Pygocentrus_nattereri
ENSAMXG00000037893	rrs1	79	66.230	ENSRNOG00000007240	Rrs1	86	65.397	Rattus_norvegicus
ENSAMXG00000037893	rrs1	79	65.902	ENSRBIG00000009132	RRS1	84	65.902	Rhinopithecus_bieti
ENSAMXG00000037893	rrs1	79	65.902	ENSRROG00000013472	RRS1	84	65.902	Rhinopithecus_roxellana
ENSAMXG00000037893	rrs1	79	65.461	ENSSBOG00000012639	-	88	65.273	Saimiri_boliviensis_boliviensis
ENSAMXG00000037893	rrs1	79	65.574	ENSSBOG00000011006	-	86	65.574	Saimiri_boliviensis_boliviensis
ENSAMXG00000037893	rrs1	75	59.516	ENSSFOG00015015772	rrs1	85	58.746	Scleropages_formosus
ENSAMXG00000037893	rrs1	77	71.525	ENSSMAG00000015226	rrs1	84	71.711	Scophthalmus_maximus
ENSAMXG00000037893	rrs1	62	63.025	ENSSARG00000006976	RRS1	65	62.500	Sorex_araneus
ENSAMXG00000037893	rrs1	91	61.433	ENSSSCG00000006214	RRS1	84	66.557	Sus_scrofa
ENSAMXG00000037893	rrs1	80	70.227	ENSTRUG00000008796	rrs1	91	70.805	Takifugu_rubripes
ENSAMXG00000037893	rrs1	83	72.414	ENSTNIG00000004026	rrs1	93	72.414	Tetraodon_nigroviridis
ENSAMXG00000037893	rrs1	79	65.902	ENSTBEG00000014752	RRS1	84	65.902	Tupaia_belangeri
ENSAMXG00000037893	rrs1	91	61.983	ENSUAMG00000008502	RRS1	84	65.902	Ursus_americanus
ENSAMXG00000037893	rrs1	79	66.230	ENSVVUG00000018452	RRS1	84	66.230	Vulpes_vulpes
ENSAMXG00000037893	rrs1	77	75.168	ENSXCOG00000009809	rrs1	95	68.661	Xiphophorus_couchianus