EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000038043 (Gene tree)
Gene ID: 103034067
Gene Symbol: -
Alias: -
Full Name: zinc finger E-box-binding homeobox 2-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 53384 bases
Position: chr13:28593104-28646487
Accession: 103034067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000036910	zf-C2H2	PF00096.26	9.5e-16	1	3
ENSAMXP00000036910	zf-C2H2	PF00096.26	9.5e-16	2	3
ENSAMXP00000036910	zf-C2H2	PF00096.26	9.5e-16	3	3
ENSAMXP00000048172	zf-C2H2	PF00096.26	1.8e-15	1	3
ENSAMXP00000048172	zf-C2H2	PF00096.26	1.8e-15	2	3
ENSAMXP00000048172	zf-C2H2	PF00096.26	1.8e-15	3	3
ENSAMXP00000036910	zf-met	PF12874.7	1.3e-05	1	1
ENSAMXP00000048172	zf-met	PF12874.7	2.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000047017	-	7280	XM_007253434	ENSAMXP00000048172	1014 (aa)	XP_007253496	-
ENSAMXT00000057984	-	7572	XM_022675638	ENSAMXP00000036910	941 (aa)	XP_022531359	UPI000BBDDDC7

Gene Model

Click here to download ENSAMXG00000038043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038043's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000038043	-	73	44.792	ENSAMXG00000008022	zeb2b	75	44.660

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038043	-	90	46.179	ENSLBEG00000013336	-	90	46.843	Labrus_bergylta
ENSAMXG00000038043	-	90	44.921	ENSPKIG00000003002	-	92	45.426	Paramormyrops_kingsleyae