EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000038047 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 3981 bases
Position: chr12:30100297-30104277
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000048785	RVT_1	PF00078.27	8.1e-23	1	1
ENSAMXP00000048785	RNase_H	PF00075.24	8.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000034735	-	3981	-	ENSAMXP00000048785	1326 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000038047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038047's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000038047	-	98	99.538	ENSAMXG00000040932	-	99	99.538
ENSAMXG00000038047	-	72	48.889	ENSAMXG00000038483	-	94	48.889
ENSAMXG00000038047	-	79	36.150	ENSAMXG00000033455	-	86	36.150
ENSAMXG00000038047	-	79	36.312	ENSAMXG00000033060	-	87	36.174
ENSAMXG00000038047	-	51	30.769	ENSAMXG00000032571	-	51	30.769
ENSAMXG00000038047	-	90	36.198	ENSAMXG00000040526	-	99	36.760

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038047	-	65	46.154	ENSATEG00000004659	-	87	46.154	Anabas_testudineus
ENSAMXG00000038047	-	84	36.042	ENSCSEG00000008943	-	97	36.042	Cynoglossus_semilaevis
ENSAMXG00000038047	-	59	43.561	ENSMAMG00000005691	-	97	43.561	Mastacembelus_armatus