EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000038080 (Gene tree)
Gene ID: 103045096
Gene Symbol: rbm22
Alias: fb37a01|fc62e03|fe05c04|wu:fb37a01|wu:fc62e03|wu:fe05c04|zgc:77910
Full Name: RNA binding motif protein 22
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 12670 bases
Position: chr14:9876627-9889296
Accession: 103045096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000046926	RRM_1	PF00076.22	2.8e-10	1	1
ENSAMXP00000019752	RRM_1	PF00076.22	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000040364	-	5629	XM_022676161	ENSAMXP00000046926	482 (aa)	XP_022531882	-
ENSAMXT00000019752	-	1191	-	ENSAMXP00000019752	396 (aa)	-	W5LIU0

Gene Model

Click here to download ENSAMXG00000038080's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038080's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000038080	rbm22	99	77.176	ENSAMXG00000018529	-	99	85.412

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038080	rbm22	99	79.196	ENSG00000086589	RBM22	100	90.323	Homo_sapiens
ENSAMXG00000038080	rbm22	99	83.333	ENSAPOG00000010338	rbm22	99	86.417	Acanthochromis_polyacanthus
ENSAMXG00000038080	rbm22	99	79.196	ENSAMEG00000004544	RBM22	99	85.816	Ailuropoda_melanoleuca
ENSAMXG00000038080	rbm22	99	81.473	ENSACIG00000016372	rbm22	99	81.710	Amphilophus_citrinellus
ENSAMXG00000038080	rbm22	99	83.333	ENSAOCG00000007179	rbm22	99	86.417	Amphiprion_ocellaris
ENSAMXG00000038080	rbm22	99	82.090	ENSAPEG00000016689	rbm22	99	86.417	Amphiprion_percula
ENSAMXG00000038080	rbm22	99	83.824	ENSATEG00000008286	rbm22	99	86.885	Anabas_testudineus
ENSAMXG00000038080	rbm22	99	80.952	ENSAPLG00000016408	RBM22	98	83.493	Anas_platyrhynchos
ENSAMXG00000038080	rbm22	99	77.358	ENSACAG00000014750	RBM22	99	85.849	Anolis_carolinensis
ENSAMXG00000038080	rbm22	99	81.250	ENSANAG00000033743	-	99	85.579	Aotus_nancymaae
ENSAMXG00000038080	rbm22	95	78.684	ENSANAG00000019688	-	99	79.381	Aotus_nancymaae
ENSAMXG00000038080	rbm22	99	84.069	ENSACLG00000008863	rbm22	99	87.119	Astatotilapia_calliptera
ENSAMXG00000038080	rbm22	99	79.196	ENSBTAG00000030366	RBM22	99	85.816	Bos_taurus
ENSAMXG00000038080	rbm22	76	50.746	WBGene00011722	rbm-22	75	60.261	Caenorhabditis_elegans
ENSAMXG00000038080	rbm22	99	80.096	ENSCJAG00000020963	RBM22	99	85.579	Callithrix_jacchus
ENSAMXG00000038080	rbm22	85	78.630	ENSCJAG00000013247	-	87	85.484	Callithrix_jacchus
ENSAMXG00000038080	rbm22	99	78.824	ENSCAFG00000018082	RBM22	99	85.412	Canis_familiaris
ENSAMXG00000038080	rbm22	99	79.196	ENSCAFG00020023671	RBM22	99	85.816	Canis_lupus_dingo
ENSAMXG00000038080	rbm22	99	79.196	ENSCHIG00000015561	RBM22	99	85.816	Capra_hircus
ENSAMXG00000038080	rbm22	99	81.910	ENSTSYG00000003939	-	99	85.816	Carlito_syrichta
ENSAMXG00000038080	rbm22	94	75.067	ENSTSYG00000037586	-	99	74.663	Carlito_syrichta
ENSAMXG00000038080	rbm22	97	81.234	ENSCAPG00000002598	RBM22	95	82.653	Cavia_aperea
ENSAMXG00000038080	rbm22	99	79.196	ENSCPOG00000001946	RBM22	99	85.816	Cavia_porcellus
ENSAMXG00000038080	rbm22	99	78.960	ENSCCAG00000033546	RBM22	99	85.579	Cebus_capucinus
ENSAMXG00000038080	rbm22	99	79.196	ENSCATG00000042133	RBM22	99	85.816	Cercocebus_atys
ENSAMXG00000038080	rbm22	99	65.721	ENSCLAG00000007106	-	99	69.267	Chinchilla_lanigera
ENSAMXG00000038080	rbm22	99	58.353	ENSCLAG00000014221	-	95	61.717	Chinchilla_lanigera
ENSAMXG00000038080	rbm22	99	81.114	ENSCLAG00000010842	-	99	85.816	Chinchilla_lanigera
ENSAMXG00000038080	rbm22	93	79.648	ENSCSAG00000019006	-	93	88.767	Chlorocebus_sabaeus
ENSAMXG00000038080	rbm22	99	79.147	ENSCHOG00000001041	-	99	85.343	Choloepus_hoffmanni
ENSAMXG00000038080	rbm22	99	78.251	ENSCHOG00000013522	-	99	84.870	Choloepus_hoffmanni
ENSAMXG00000038080	rbm22	73	89.655	ENSCHOG00000004192	-	98	91.096	Choloepus_hoffmanni
ENSAMXG00000038080	rbm22	95	84.881	ENSCPBG00000010094	RBM22	99	86.052	Chrysemys_picta_bellii
ENSAMXG00000038080	rbm22	98	56.028	ENSCING00000005843	zf(c3h)-12	99	62.559	Ciona_intestinalis
ENSAMXG00000038080	rbm22	98	56.776	ENSCSAVG00000009145	-	99	62.028	Ciona_savignyi
ENSAMXG00000038080	rbm22	99	79.196	ENSCANG00000025232	RBM22	99	85.816	Colobus_angolensis_palliatus
ENSAMXG00000038080	rbm22	99	79.196	ENSCGRG00001015110	Rbm22	99	85.816	Cricetulus_griseus_chok1gshd
ENSAMXG00000038080	rbm22	99	79.648	ENSCGRG00000011751	Rbm22	99	80.952	Cricetulus_griseus_crigri
ENSAMXG00000038080	rbm22	99	82.836	ENSCSEG00000010790	rbm22	98	85.986	Cynoglossus_semilaevis
ENSAMXG00000038080	rbm22	99	81.728	ENSCVAG00000010670	rbm22	99	84.670	Cyprinodon_variegatus
ENSAMXG00000038080	rbm22	99	84.000	ENSDARG00000010238	rbm22	99	90.824	Danio_rerio
ENSAMXG00000038080	rbm22	99	79.196	ENSDNOG00000011166	RBM22	99	85.816	Dasypus_novemcinctus
ENSAMXG00000038080	rbm22	99	62.892	ENSDORG00000005329	Rbm22	99	65.957	Dipodomys_ordii
ENSAMXG00000038080	rbm22	90	52.956	FBgn0037220	CG14641	99	55.349	Drosophila_melanogaster
ENSAMXG00000038080	rbm22	81	87.234	ENSEBUG00000016742	-	99	87.234	Eptatretus_burgeri
ENSAMXG00000038080	rbm22	99	79.196	ENSEASG00005002681	RBM22	99	85.816	Equus_asinus_asinus
ENSAMXG00000038080	rbm22	99	70.236	ENSECAG00000014940	RBM22	84	88.767	Equus_caballus
ENSAMXG00000038080	rbm22	99	62.945	ENSEEUG00000009778	-	99	68.322	Erinaceus_europaeus
ENSAMXG00000038080	rbm22	99	77.069	ENSEEUG00000005638	-	99	83.924	Erinaceus_europaeus
ENSAMXG00000038080	rbm22	99	79.717	ENSELUG00000001106	rbm22	97	84.507	Esox_lucius
ENSAMXG00000038080	rbm22	99	79.196	ENSFCAG00000018845	RBM22	99	85.816	Felis_catus
ENSAMXG00000038080	rbm22	99	78.960	ENSFALG00000008051	RBM22	99	85.579	Ficedula_albicollis
ENSAMXG00000038080	rbm22	99	81.114	ENSFDAG00000020067	RBM22	99	85.816	Fukomys_damarensis
ENSAMXG00000038080	rbm22	99	82.512	ENSFHEG00000014032	rbm22	99	85.412	Fundulus_heteroclitus
ENSAMXG00000038080	rbm22	98	78.910	ENSGMOG00000010186	rbm22	100	86.493	Gadus_morhua
ENSAMXG00000038080	rbm22	99	85.063	ENSGALG00000004555	RBM22	99	86.052	Gallus_gallus
ENSAMXG00000038080	rbm22	99	81.773	ENSGAFG00000008621	rbm22	99	85.142	Gambusia_affinis
ENSAMXG00000038080	rbm22	99	79.343	ENSGACG00000018027	rbm22	99	86.854	Gasterosteus_aculeatus
ENSAMXG00000038080	rbm22	99	79.669	ENSGAGG00000024305	RBM22	99	86.288	Gopherus_agassizii
ENSAMXG00000038080	rbm22	99	79.196	ENSGGOG00000012947	RBM22	99	85.816	Gorilla_gorilla
ENSAMXG00000038080	rbm22	99	80.094	ENSHBUG00000002941	rbm22	99	87.119	Haplochromis_burtoni
ENSAMXG00000038080	rbm22	99	79.196	ENSHGLG00000008488	RBM22	99	85.816	Heterocephalus_glaber_female
ENSAMXG00000038080	rbm22	97	79.036	ENSHGLG00100006872	RBM22	98	85.783	Heterocephalus_glaber_male
ENSAMXG00000038080	rbm22	84	79.063	ENSHCOG00000016334	rbm22	92	86.575	Hippocampus_comes
ENSAMXG00000038080	rbm22	100	89.461	ENSIPUG00000019751	rbm22	100	92.723	Ictalurus_punctatus
ENSAMXG00000038080	rbm22	99	64.941	ENSSTOG00000027197	RBM22	99	70.213	Ictidomys_tridecemlineatus
ENSAMXG00000038080	rbm22	99	72.127	ENSSTOG00000029346	-	97	74.468	Ictidomys_tridecemlineatus
ENSAMXG00000038080	rbm22	99	79.952	ENSJJAG00000009565	Rbm22	99	85.816	Jaculus_jaculus
ENSAMXG00000038080	rbm22	99	78.860	ENSKMAG00000004354	rbm22	98	85.986	Kryptolebias_marmoratus
ENSAMXG00000038080	rbm22	98	80.000	ENSLBEG00000027750	rbm22	88	87.173	Labrus_bergylta
ENSAMXG00000038080	rbm22	100	80.282	ENSLOCG00000010989	rbm22	100	87.324	Lepisosteus_oculatus
ENSAMXG00000038080	rbm22	99	79.196	ENSLAFG00000006638	RBM22	99	85.816	Loxodonta_africana
ENSAMXG00000038080	rbm22	99	79.196	ENSMFAG00000004034	RBM22	99	85.816	Macaca_fascicularis
ENSAMXG00000038080	rbm22	99	79.196	ENSMMUG00000020683	RBM22	99	85.816	Macaca_mulatta
ENSAMXG00000038080	rbm22	99	79.196	ENSMNEG00000035500	RBM22	99	85.816	Macaca_nemestrina
ENSAMXG00000038080	rbm22	99	79.196	ENSMLEG00000034825	RBM22	99	85.816	Mandrillus_leucophaeus
ENSAMXG00000038080	rbm22	99	83.333	ENSMAMG00000007370	rbm22	99	86.417	Mastacembelus_armatus
ENSAMXG00000038080	rbm22	95	85.564	ENSMZEG00005013001	rbm22	99	87.119	Maylandia_zebra
ENSAMXG00000038080	rbm22	99	79.433	ENSMGAG00000006298	RBM22	99	86.052	Meleagris_gallopavo
ENSAMXG00000038080	rbm22	99	79.196	ENSMAUG00000001133	Rbm22	99	85.816	Mesocricetus_auratus
ENSAMXG00000038080	rbm22	99	80.336	ENSMICG00000033712	RBM22	99	85.816	Microcebus_murinus
ENSAMXG00000038080	rbm22	99	73.286	ENSMOCG00000018311	Rbm22	99	79.905	Microtus_ochrogaster
ENSAMXG00000038080	rbm22	99	79.108	ENSMMOG00000003192	rbm22	99	85.948	Mola_mola
ENSAMXG00000038080	rbm22	99	79.196	ENSMODG00000009574	-	99	85.343	Monodelphis_domestica
ENSAMXG00000038080	rbm22	100	72.196	ENSMODG00000006398	-	100	78.505	Monodelphis_domestica
ENSAMXG00000038080	rbm22	99	78.689	ENSMALG00000013964	rbm22	99	85.714	Monopterus_albus
ENSAMXG00000038080	rbm22	99	79.196	MGP_CAROLIEiJ_G0022307	Rbm22	99	85.816	Mus_caroli
ENSAMXG00000038080	rbm22	99	79.196	ENSMUSG00000024604	Rbm22	99	85.816	Mus_musculus
ENSAMXG00000038080	rbm22	99	79.196	MGP_PahariEiJ_G0019037	Rbm22	99	85.816	Mus_pahari
ENSAMXG00000038080	rbm22	99	79.196	MGP_SPRETEiJ_G0023219	Rbm22	99	85.816	Mus_spretus
ENSAMXG00000038080	rbm22	99	79.196	ENSMPUG00000013760	RBM22	99	85.816	Mustela_putorius_furo
ENSAMXG00000038080	rbm22	99	76.000	ENSMLUG00000003461	-	99	82.979	Myotis_lucifugus
ENSAMXG00000038080	rbm22	99	79.196	ENSMLUG00000009040	RBM22	99	85.816	Myotis_lucifugus
ENSAMXG00000038080	rbm22	99	80.964	ENSNGAG00000018233	Rbm22	99	85.816	Nannospalax_galili
ENSAMXG00000038080	rbm22	95	85.302	ENSNBRG00000010458	rbm22	95	85.838	Neolamprologus_brichardi
ENSAMXG00000038080	rbm22	99	81.910	ENSNLEG00000010397	-	99	85.816	Nomascus_leucogenys
ENSAMXG00000038080	rbm22	80	66.667	ENSMEUG00000001573	-	78	83.333	Notamacropus_eugenii
ENSAMXG00000038080	rbm22	99	73.786	ENSMEUG00000009348	-	99	75.238	Notamacropus_eugenii
ENSAMXG00000038080	rbm22	99	66.019	ENSOPRG00000016612	-	99	67.376	Ochotona_princeps
ENSAMXG00000038080	rbm22	99	79.433	ENSOPRG00000008481	-	99	86.052	Ochotona_princeps
ENSAMXG00000038080	rbm22	99	78.251	ENSODEG00000005016	RBM22	99	84.870	Octodon_degus
ENSAMXG00000038080	rbm22	99	80.516	ENSONIG00000013049	rbm22	99	86.854	Oreochromis_niloticus
ENSAMXG00000038080	rbm22	99	77.934	ENSOANG00000002314	RBM22	99	84.507	Ornithorhynchus_anatinus
ENSAMXG00000038080	rbm22	99	79.196	ENSOCUG00000011532	RBM22	99	85.816	Oryctolagus_cuniculus
ENSAMXG00000038080	rbm22	99	77.594	ENSORLG00000004975	rbm22	99	84.434	Oryzias_latipes
ENSAMXG00000038080	rbm22	99	81.281	ENSORLG00020012969	rbm22	99	84.434	Oryzias_latipes_hni
ENSAMXG00000038080	rbm22	99	77.594	ENSORLG00015022508	rbm22	99	84.434	Oryzias_latipes_hsok
ENSAMXG00000038080	rbm22	99	81.034	ENSOMEG00000004904	rbm22	99	84.670	Oryzias_melastigma
ENSAMXG00000038080	rbm22	99	74.413	ENSOGAG00000011086	RBM22	99	81.176	Otolemur_garnettii
ENSAMXG00000038080	rbm22	99	77.412	ENSOARG00000007633	RBM22	99	84.000	Ovis_aries
ENSAMXG00000038080	rbm22	99	79.196	ENSPPAG00000034432	RBM22	99	85.816	Pan_paniscus
ENSAMXG00000038080	rbm22	99	79.196	ENSPPRG00000011577	RBM22	99	85.816	Panthera_pardus
ENSAMXG00000038080	rbm22	99	79.196	ENSPTIG00000004453	RBM22	99	85.816	Panthera_tigris_altaica
ENSAMXG00000038080	rbm22	99	79.196	ENSPTRG00000017423	RBM22	99	85.816	Pan_troglodytes
ENSAMXG00000038080	rbm22	99	79.196	ENSPANG00000011297	RBM22	99	85.816	Papio_anubis
ENSAMXG00000038080	rbm22	100	80.047	ENSPKIG00000010315	rbm22	100	86.854	Paramormyrops_kingsleyae
ENSAMXG00000038080	rbm22	76	85.989	ENSPKIG00000019326	rbm22	83	88.219	Paramormyrops_kingsleyae
ENSAMXG00000038080	rbm22	99	79.669	ENSPSIG00000012818	RBM22	99	86.288	Pelodiscus_sinensis
ENSAMXG00000038080	rbm22	98	78.520	ENSPMGG00000017638	rbm22	100	85.238	Periophthalmus_magnuspinnatus
ENSAMXG00000038080	rbm22	99	80.723	ENSPEMG00000001753	Rbm22	99	85.579	Peromyscus_maniculatus_bairdii
ENSAMXG00000038080	rbm22	84	64.553	ENSPMAG00000007317	-	99	66.087	Petromyzon_marinus
ENSAMXG00000038080	rbm22	99	69.031	ENSPCIG00000015088	RBM22	99	73.050	Phascolarctos_cinereus
ENSAMXG00000038080	rbm22	99	78.066	ENSPFOG00000005625	rbm22	99	84.906	Poecilia_formosa
ENSAMXG00000038080	rbm22	99	81.773	ENSPLAG00000006344	rbm22	99	85.142	Poecilia_latipinna
ENSAMXG00000038080	rbm22	99	81.773	ENSPMEG00000007992	rbm22	99	84.319	Poecilia_mexicana
ENSAMXG00000038080	rbm22	99	81.527	ENSPREG00000003546	rbm22	99	84.906	Poecilia_reticulata
ENSAMXG00000038080	rbm22	99	79.196	ENSPPYG00000015955	RBM22	99	85.816	Pongo_abelii
ENSAMXG00000038080	rbm22	69	85.401	ENSPCAG00000015091	RBM22	97	73.973	Procavia_capensis
ENSAMXG00000038080	rbm22	99	79.196	ENSPVAG00000014231	RBM22	99	85.816	Pteropus_vampyrus
ENSAMXG00000038080	rbm22	85	86.127	ENSPNYG00000000380	rbm22	95	86.127	Pundamilia_nyererei
ENSAMXG00000038080	rbm22	99	88.915	ENSPNAG00000002687	rbm22	99	95.991	Pygocentrus_nattereri
ENSAMXG00000038080	rbm22	99	78.824	ENSPNAG00000010001	-	99	88.235	Pygocentrus_nattereri
ENSAMXG00000038080	rbm22	99	78.723	ENSRNOG00000019235	Rbm22	99	85.343	Rattus_norvegicus
ENSAMXG00000038080	rbm22	99	79.196	ENSRBIG00000041683	RBM22	99	85.816	Rhinopithecus_bieti
ENSAMXG00000038080	rbm22	99	79.196	ENSRROG00000041637	RBM22	99	85.816	Rhinopithecus_roxellana
ENSAMXG00000038080	rbm22	99	79.856	ENSSBOG00000035400	-	99	85.343	Saimiri_boliviensis_boliviensis
ENSAMXG00000038080	rbm22	99	79.196	ENSSHAG00000017734	-	99	85.106	Sarcophilus_harrisii
ENSAMXG00000038080	rbm22	100	79.024	ENSSFOG00015022259	rbm22	100	84.038	Scleropages_formosus
ENSAMXG00000038080	rbm22	100	81.863	ENSSFOG00015014955	rbm22	100	88.028	Scleropages_formosus
ENSAMXG00000038080	rbm22	99	84.069	ENSSMAG00000002921	rbm22	99	87.119	Scophthalmus_maximus
ENSAMXG00000038080	rbm22	99	82.338	ENSSDUG00000003846	rbm22	99	86.651	Seriola_dumerili
ENSAMXG00000038080	rbm22	99	80.235	ENSSLDG00000003804	rbm22	99	86.651	Seriola_lalandi_dorsalis
ENSAMXG00000038080	rbm22	56	89.256	ENSSARG00000003205	-	52	98.148	Sorex_araneus
ENSAMXG00000038080	rbm22	99	77.594	ENSSPUG00000003986	RBM22	99	86.085	Sphenodon_punctatus
ENSAMXG00000038080	rbm22	99	83.578	ENSSPAG00000000383	rbm22	99	86.651	Stegastes_partitus
ENSAMXG00000038080	rbm22	99	82.759	ENSSSCG00000023231	RBM22	99	85.377	Sus_scrofa
ENSAMXG00000038080	rbm22	99	78.960	ENSTGUG00000000850	RBM22	99	85.579	Taeniopygia_guttata
ENSAMXG00000038080	rbm22	99	81.034	ENSTRUG00000004724	rbm22	99	84.670	Takifugu_rubripes
ENSAMXG00000038080	rbm22	99	67.925	ENSTBEG00000005617	RBM22	99	73.286	Tupaia_belangeri
ENSAMXG00000038080	rbm22	99	79.196	ENSTTRG00000012778	RBM22	99	85.816	Tursiops_truncatus
ENSAMXG00000038080	rbm22	99	79.196	ENSUAMG00000025133	RBM22	99	85.816	Ursus_americanus
ENSAMXG00000038080	rbm22	99	79.196	ENSUMAG00000003651	RBM22	99	85.816	Ursus_maritimus
ENSAMXG00000038080	rbm22	99	79.196	ENSVVUG00000007193	RBM22	99	85.816	Vulpes_vulpes
ENSAMXG00000038080	rbm22	99	75.118	ENSXETG00000020435	rbm22	99	82.227	Xenopus_tropicalis
ENSAMXG00000038080	rbm22	99	77.882	ENSXCOG00000003316	rbm22	99	80.706	Xiphophorus_couchianus
ENSAMXG00000038080	rbm22	99	78.118	ENSXMAG00000008681	rbm22	99	84.941	Xiphophorus_maculatus