EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000038120 (Gene tree)
Gene ID: 107196932
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 12744 bases
Position: chrAPWO02001009.1:200185-212928
Accession: 107196932
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000033765	RRM_1	PF00076.22	2.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000036675	-	1410	XM_022687131	ENSAMXP00000033765	234 (aa)	XP_022542852	UPI000BBDFA68

Gene Model

Click here to download ENSAMXG00000038120's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038120's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000038120	rbm38	63	68.874	ENSAMXG00000040572	rbm24a	97	56.828
ENSAMXG00000038120	rbm38	81	71.579	ENSAMXG00000015601	-	96	66.228

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038120	rbm38	76	64.324	ENSG00000132819	RBM38	89	82.569	Homo_sapiens
ENSAMXG00000038120	rbm38	82	71.574	ENSAPOG00000009939	-	96	65.812	Acanthochromis_polyacanthus
ENSAMXG00000038120	rbm38	96	56.540	ENSAPOG00000003301	rbm38	95	56.540	Acanthochromis_polyacanthus
ENSAMXG00000038120	rbm38	97	65.385	ENSACIG00000012502	-	93	83.486	Amphilophus_citrinellus
ENSAMXG00000038120	rbm38	96	55.882	ENSACIG00000000010	rbm38	95	55.882	Amphilophus_citrinellus
ENSAMXG00000038120	rbm38	96	56.540	ENSAOCG00000013497	-	95	56.540	Amphiprion_ocellaris
ENSAMXG00000038120	rbm38	97	61.966	ENSAOCG00000012559	RBM38	99	65.812	Amphiprion_ocellaris
ENSAMXG00000038120	rbm38	81	70.466	ENSAPEG00000023581	-	96	65.385	Amphiprion_percula
ENSAMXG00000038120	rbm38	96	56.540	ENSAPEG00000013137	rbm38	95	56.540	Amphiprion_percula
ENSAMXG00000038120	rbm38	81	72.539	ENSATEG00000016710	-	96	65.812	Anabas_testudineus
ENSAMXG00000038120	rbm38	94	57.522	ENSATEG00000016366	rbm38	94	57.522	Anabas_testudineus
ENSAMXG00000038120	rbm38	72	69.540	ENSACAG00000016238	RBM38	72	69.540	Anolis_carolinensis
ENSAMXG00000038120	rbm38	76	65.405	ENSANAG00000031959	RBM38	78	86.170	Aotus_nancymaae
ENSAMXG00000038120	rbm38	97	65.812	ENSACLG00000019514	-	96	65.812	Astatotilapia_calliptera
ENSAMXG00000038120	rbm38	92	57.207	ENSBTAG00000008105	RBM38	88	56.757	Bos_taurus
ENSAMXG00000038120	rbm38	57	63.910	WBGene00006321	sup-12	91	60.135	Caenorhabditis_elegans
ENSAMXG00000038120	rbm38	76	65.405	ENSCJAG00000019139	RBM38	78	86.170	Callithrix_jacchus
ENSAMXG00000038120	rbm38	92	58.559	ENSCAFG00020021943	RBM38	88	58.108	Canis_lupus_dingo
ENSAMXG00000038120	rbm38	92	56.757	ENSCHIG00000002609	RBM38	88	56.306	Capra_hircus
ENSAMXG00000038120	rbm38	91	56.889	ENSCPOG00000012781	RBM38	86	56.444	Cavia_porcellus
ENSAMXG00000038120	rbm38	76	65.405	ENSCCAG00000036872	RBM38	78	86.170	Cebus_capucinus
ENSAMXG00000038120	rbm38	81	61.421	ENSCATG00000032133	RBM38	78	86.170	Cercocebus_atys
ENSAMXG00000038120	rbm38	76	64.865	ENSCLAG00000005906	RBM38	80	64.324	Chinchilla_lanigera
ENSAMXG00000038120	rbm38	81	61.421	ENSCSAG00000015503	RBM38	83	60.914	Chlorocebus_sabaeus
ENSAMXG00000038120	rbm38	92	59.545	ENSCPBG00000024059	RBM38	97	59.091	Chrysemys_picta_bellii
ENSAMXG00000038120	rbm38	64	57.764	ENSCING00000025102	-	99	46.281	Ciona_intestinalis
ENSAMXG00000038120	rbm38	64	61.935	ENSCSAVG00000001132	-	57	62.500	Ciona_savignyi
ENSAMXG00000038120	rbm38	81	47.938	ENSCANG00000030105	-	72	47.938	Colobus_angolensis_palliatus
ENSAMXG00000038120	rbm38	71	68.235	ENSCGRG00001012928	Rbm38	78	64.865	Cricetulus_griseus_chok1gshd
ENSAMXG00000038120	rbm38	67	64.151	ENSCSEG00000020943	rbm38	58	62.069	Cynoglossus_semilaevis
ENSAMXG00000038120	rbm38	92	66.972	ENSCSEG00000004701	-	98	63.900	Cynoglossus_semilaevis
ENSAMXG00000038120	rbm38	97	63.248	ENSCVAG00000005472	-	96	64.530	Cyprinodon_variegatus
ENSAMXG00000038120	rbm38	82	60.302	ENSCVAG00000015952	rbm38	94	54.701	Cyprinodon_variegatus
ENSAMXG00000038120	rbm38	99	67.373	ENSDARG00000058818	rbm38	99	67.373	Danio_rerio
ENSAMXG00000038120	rbm38	76	65.027	ENSDNOG00000032004	RBM38	88	64.481	Dasypus_novemcinctus
ENSAMXG00000038120	rbm38	92	58.108	ENSECAG00000007700	RBM38	88	57.658	Equus_caballus
ENSAMXG00000038120	rbm38	68	67.485	ENSEEUG00000013489	RBM38	80	61.979	Erinaceus_europaeus
ENSAMXG00000038120	rbm38	98	61.633	ENSELUG00000005849	-	96	63.404	Esox_lucius
ENSAMXG00000038120	rbm38	91	57.848	ENSELUG00000000585	-	98	57.848	Esox_lucius
ENSAMXG00000038120	rbm38	76	64.865	ENSFCAG00000042916	RBM38	76	86.957	Felis_catus
ENSAMXG00000038120	rbm38	71	69.643	ENSFALG00000010805	RBM38	87	69.643	Ficedula_albicollis
ENSAMXG00000038120	rbm38	97	64.348	ENSFHEG00000006160	-	96	64.348	Fundulus_heteroclitus
ENSAMXG00000038120	rbm38	96	56.067	ENSFHEG00000017748	rbm38	95	56.067	Fundulus_heteroclitus
ENSAMXG00000038120	rbm38	73	72.159	ENSGMOG00000016655	-	95	72.727	Gadus_morhua
ENSAMXG00000038120	rbm38	71	69.412	ENSGALG00000026081	RBM38	97	60.455	Gallus_gallus
ENSAMXG00000038120	rbm38	89	69.194	ENSGACG00000009873	-	93	69.194	Gasterosteus_aculeatus
ENSAMXG00000038120	rbm38	92	59.535	ENSGACG00000015224	rbm38	98	59.535	Gasterosteus_aculeatus
ENSAMXG00000038120	rbm38	92	59.545	ENSGAGG00000001187	RBM38	97	59.091	Gopherus_agassizii
ENSAMXG00000038120	rbm38	96	55.882	ENSHBUG00000012058	rbm38	95	55.882	Haplochromis_burtoni
ENSAMXG00000038120	rbm38	97	65.812	ENSHBUG00000011778	-	96	65.812	Haplochromis_burtoni
ENSAMXG00000038120	rbm38	68	66.667	ENSHGLG00000015077	RBM38	77	63.784	Heterocephalus_glaber_female
ENSAMXG00000038120	rbm38	84	52.261	ENSHCOG00000019040	rbm38	80	52.261	Hippocampus_comes
ENSAMXG00000038120	rbm38	81	67.876	ENSHCOG00000005622	-	56	68.912	Hippocampus_comes
ENSAMXG00000038120	rbm38	97	62.719	ENSIPUG00000019349	-	96	60.526	Ictalurus_punctatus
ENSAMXG00000038120	rbm38	79	56.500	ENSKMAG00000012402	rbm38	86	56.500	Kryptolebias_marmoratus
ENSAMXG00000038120	rbm38	97	63.755	ENSLBEG00000016163	RBM38	96	64.629	Labrus_bergylta
ENSAMXG00000038120	rbm38	96	55.882	ENSLBEG00000018878	rbm38	95	55.882	Labrus_bergylta
ENSAMXG00000038120	rbm38	99	65.236	ENSLOCG00000003456	rbm38	99	65.236	Lepisosteus_oculatus
ENSAMXG00000038120	rbm38	81	61.421	ENSMFAG00000043808	RBM38	76	88.043	Macaca_fascicularis
ENSAMXG00000038120	rbm38	81	61.421	ENSMMUG00000031391	RBM38	78	86.170	Macaca_mulatta
ENSAMXG00000038120	rbm38	81	61.421	ENSMNEG00000034683	RBM38	78	86.170	Macaca_nemestrina
ENSAMXG00000038120	rbm38	99	61.826	ENSMAMG00000020499	RBM38	99	63.071	Mastacembelus_armatus
ENSAMXG00000038120	rbm38	96	56.303	ENSMAMG00000024135	rbm38	95	56.303	Mastacembelus_armatus
ENSAMXG00000038120	rbm38	96	55.882	ENSMZEG00005026036	rbm38	95	55.882	Maylandia_zebra
ENSAMXG00000038120	rbm38	97	65.812	ENSMZEG00005000849	-	96	65.812	Maylandia_zebra
ENSAMXG00000038120	rbm38	73	68.786	ENSMAUG00000021211	Rbm38	78	65.405	Mesocricetus_auratus
ENSAMXG00000038120	rbm38	76	65.946	ENSMICG00000038011	RBM38	86	65.405	Microcebus_murinus
ENSAMXG00000038120	rbm38	73	68.208	ENSMOCG00000008715	Rbm38	78	64.865	Microtus_ochrogaster
ENSAMXG00000038120	rbm38	97	63.248	ENSMMOG00000020051	-	96	65.385	Mola_mola
ENSAMXG00000038120	rbm38	71	68.235	ENSMODG00000016458	RBM38	89	58.182	Monodelphis_domestica
ENSAMXG00000038120	rbm38	73	76.437	ENSMALG00000004680	RBM38	66	76.437	Monopterus_albus
ENSAMXG00000038120	rbm38	71	65.680	ENSMALG00000022327	rbm38	72	66.467	Monopterus_albus
ENSAMXG00000038120	rbm38	70	67.683	MGP_CAROLIEiJ_G0024745	Rbm38	78	63.784	Mus_caroli
ENSAMXG00000038120	rbm38	70	67.683	ENSMUSG00000027510	Rbm38	78	63.784	Mus_musculus
ENSAMXG00000038120	rbm38	70	67.683	MGP_PahariEiJ_G0026186	Rbm38	78	63.784	Mus_pahari
ENSAMXG00000038120	rbm38	70	67.683	MGP_SPRETEiJ_G0025665	Rbm38	78	63.784	Mus_spretus
ENSAMXG00000038120	rbm38	74	65.746	ENSMPUG00000006518	RBM38	94	62.632	Mustela_putorius_furo
ENSAMXG00000038120	rbm38	76	62.162	ENSMLUG00000011140	RBM38	86	61.622	Myotis_lucifugus
ENSAMXG00000038120	rbm38	96	56.303	ENSNBRG00000022685	rbm38	95	56.303	Neolamprologus_brichardi
ENSAMXG00000038120	rbm38	97	65.812	ENSNBRG00000022545	-	96	65.812	Neolamprologus_brichardi
ENSAMXG00000038120	rbm38	55	64.179	ENSMEUG00000005475	-	100	64.179	Notamacropus_eugenii
ENSAMXG00000038120	rbm38	76	64.865	ENSODEG00000007980	RBM38	77	64.324	Octodon_degus
ENSAMXG00000038120	rbm38	97	65.812	ENSONIG00000020324	-	96	65.812	Oreochromis_niloticus
ENSAMXG00000038120	rbm38	96	55.882	ENSONIG00000017073	rbm38	97	55.882	Oreochromis_niloticus
ENSAMXG00000038120	rbm38	75	68.156	ENSOANG00000009259	RBM38	84	57.328	Ornithorhynchus_anatinus
ENSAMXG00000038120	rbm38	81	68.557	ENSORLG00000027180	-	96	63.136	Oryzias_latipes
ENSAMXG00000038120	rbm38	76	63.736	ENSORLG00000012154	rbm38	94	54.894	Oryzias_latipes
ENSAMXG00000038120	rbm38	81	68.557	ENSORLG00020020751	-	96	63.136	Oryzias_latipes_hni
ENSAMXG00000038120	rbm38	94	54.894	ENSORLG00020017871	rbm38	94	54.894	Oryzias_latipes_hni
ENSAMXG00000038120	rbm38	94	55.319	ENSORLG00015012606	rbm38	94	55.319	Oryzias_latipes_hsok
ENSAMXG00000038120	rbm38	82	68.020	ENSORLG00015017040	-	96	64.255	Oryzias_latipes_hsok
ENSAMXG00000038120	rbm38	82	67.513	ENSOMEG00000023912	-	96	64.103	Oryzias_melastigma
ENSAMXG00000038120	rbm38	94	55.319	ENSOMEG00000006805	rbm38	94	55.319	Oryzias_melastigma
ENSAMXG00000038120	rbm38	76	64.324	ENSOGAG00000029136	RBM38	77	63.784	Otolemur_garnettii
ENSAMXG00000038120	rbm38	76	64.865	ENSPPRG00000009507	RBM38	76	86.957	Panthera_pardus
ENSAMXG00000038120	rbm38	50	78.814	ENSPTRG00000045845	-	65	78.814	Pan_troglodytes
ENSAMXG00000038120	rbm38	76	64.324	ENSPTRG00000013661	RBM38	76	88.043	Pan_troglodytes
ENSAMXG00000038120	rbm38	81	61.421	ENSPANG00000020919	-	78	86.170	Papio_anubis
ENSAMXG00000038120	rbm38	82	51.759	ENSPANG00000033127	-	84	50.761	Papio_anubis
ENSAMXG00000038120	rbm38	81	67.010	ENSPKIG00000025417	rbm38	81	67.010	Paramormyrops_kingsleyae
ENSAMXG00000038120	rbm38	99	59.916	ENSPKIG00000018122	-	93	84.404	Paramormyrops_kingsleyae
ENSAMXG00000038120	rbm38	92	59.545	ENSPSIG00000011649	RBM38	90	59.091	Pelodiscus_sinensis
ENSAMXG00000038120	rbm38	96	56.557	ENSPMGG00000011343	rbm38	98	56.735	Periophthalmus_magnuspinnatus
ENSAMXG00000038120	rbm38	79	68.421	ENSPMGG00000017094	-	96	61.181	Periophthalmus_magnuspinnatus
ENSAMXG00000038120	rbm38	83	62.814	ENSPCIG00000013648	RBM38	85	61.307	Phascolarctos_cinereus
ENSAMXG00000038120	rbm38	79	61.458	ENSPFOG00000011658	rbm38	95	54.545	Poecilia_formosa
ENSAMXG00000038120	rbm38	97	63.983	ENSPLAG00000002500	-	96	63.983	Poecilia_latipinna
ENSAMXG00000038120	rbm38	79	60.938	ENSPLAG00000005218	rbm38	95	54.545	Poecilia_latipinna
ENSAMXG00000038120	rbm38	79	61.458	ENSPMEG00000015770	rbm38	95	54.545	Poecilia_mexicana
ENSAMXG00000038120	rbm38	96	54.959	ENSPREG00000007398	rbm38	95	54.545	Poecilia_reticulata
ENSAMXG00000038120	rbm38	88	59.906	ENSPCOG00000026201	RBM38	77	86.170	Propithecus_coquereli
ENSAMXG00000038120	rbm38	73	39.326	ENSPVAG00000006457	RBM38	88	36.036	Pteropus_vampyrus
ENSAMXG00000038120	rbm38	96	55.462	ENSPNYG00000021373	rbm38	95	55.462	Pundamilia_nyererei
ENSAMXG00000038120	rbm38	97	65.812	ENSPNYG00000019727	-	93	83.486	Pundamilia_nyererei
ENSAMXG00000038120	rbm38	97	65.948	ENSPNAG00000015123	-	86	80.180	Pygocentrus_nattereri
ENSAMXG00000038120	rbm38	99	73.276	ENSPNAG00000010596	rbm38	99	73.276	Pygocentrus_nattereri
ENSAMXG00000038120	rbm38	79	62.694	ENSRNOG00000006420	Rbm38	81	62.176	Rattus_norvegicus
ENSAMXG00000038120	rbm38	81	53.093	ENSRROG00000036388	-	81	53.093	Rhinopithecus_roxellana
ENSAMXG00000038120	rbm38	76	65.405	ENSSBOG00000031053	RBM38	86	88.043	Saimiri_boliviensis_boliviensis
ENSAMXG00000038120	rbm38	96	59.307	ENSSFOG00015004453	rbm38	96	61.039	Scleropages_formosus
ENSAMXG00000038120	rbm38	97	62.821	ENSSDUG00000021082	RBM38	96	65.385	Seriola_dumerili
ENSAMXG00000038120	rbm38	96	57.983	ENSSDUG00000022611	rbm38	95	57.983	Seriola_dumerili
ENSAMXG00000038120	rbm38	96	57.983	ENSSLDG00000010845	rbm38	95	57.983	Seriola_lalandi_dorsalis
ENSAMXG00000038120	rbm38	97	63.248	ENSSLDG00000011778	RBM38	96	65.812	Seriola_lalandi_dorsalis
ENSAMXG00000038120	rbm38	96	56.303	ENSSPAG00000011113	rbm38	95	56.303	Stegastes_partitus
ENSAMXG00000038120	rbm38	97	63.675	ENSSPAG00000020989	RBM38	100	64.957	Stegastes_partitus
ENSAMXG00000038120	rbm38	92	57.658	ENSSSCG00000007504	RBM38	88	57.207	Sus_scrofa
ENSAMXG00000038120	rbm38	97	62.553	ENSTRUG00000019869	-	96	62.553	Takifugu_rubripes
ENSAMXG00000038120	rbm38	94	57.391	ENSTRUG00000024954	rbm38	93	57.391	Takifugu_rubripes
ENSAMXG00000038120	rbm38	89	68.246	ENSTNIG00000007093	-	93	68.246	Tetraodon_nigroviridis
ENSAMXG00000038120	rbm38	76	64.865	ENSUAMG00000019780	RBM38	77	64.324	Ursus_americanus
ENSAMXG00000038120	rbm38	92	58.559	ENSVVUG00000017246	RBM38	88	58.108	Vulpes_vulpes
ENSAMXG00000038120	rbm38	71	66.471	ENSXETG00000011268	rbm38	96	57.466	Xenopus_tropicalis
ENSAMXG00000038120	rbm38	64	67.308	ENSXCOG00000017324	-	68	67.308	Xiphophorus_couchianus
ENSAMXG00000038120	rbm38	79	62.234	ENSXMAG00000023662	rbm38	95	55.462	Xiphophorus_maculatus