EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000038122 (Gene tree)
Gene ID: 107197545
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 2 homolog
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 3536 bases
Position: chr1:16538593-16542128
Accession: 107197545
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000043527	zf-C2H2	PF00096.26	8.9e-43	1	5
ENSAMXP00000043527	zf-C2H2	PF00096.26	8.9e-43	2	5
ENSAMXP00000043527	zf-C2H2	PF00096.26	8.9e-43	3	5
ENSAMXP00000043527	zf-C2H2	PF00096.26	8.9e-43	4	5
ENSAMXP00000043527	zf-C2H2	PF00096.26	8.9e-43	5	5
ENSAMXP00000009330	zf-C2H2	PF00096.26	3.2e-42	1	5
ENSAMXP00000009330	zf-C2H2	PF00096.26	3.2e-42	2	5
ENSAMXP00000009330	zf-C2H2	PF00096.26	3.2e-42	3	5
ENSAMXP00000009330	zf-C2H2	PF00096.26	3.2e-42	4	5
ENSAMXP00000009330	zf-C2H2	PF00096.26	3.2e-42	5	5
ENSAMXP00000028178	zf-C2H2	PF00096.26	2.2e-15	1	2
ENSAMXP00000028178	zf-C2H2	PF00096.26	2.2e-15	2	2
ENSAMXP00000043527	zf-met	PF12874.7	4.1e-16	1	3
ENSAMXP00000043527	zf-met	PF12874.7	4.1e-16	2	3
ENSAMXP00000043527	zf-met	PF12874.7	4.1e-16	3	3
ENSAMXP00000009330	zf-met	PF12874.7	1.8e-15	1	3
ENSAMXP00000009330	zf-met	PF12874.7	1.8e-15	2	3
ENSAMXP00000009330	zf-met	PF12874.7	1.8e-15	3	3
ENSAMXP00000028178	zf-met	PF12874.7	7.1e-06	1	2
ENSAMXP00000028178	zf-met	PF12874.7	7.1e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000040212	-	2123	-	ENSAMXP00000043527	539 (aa)	-	-
ENSAMXT00000009330	-	1788	XM_015604962	ENSAMXP00000009330	595 (aa)	XP_015460448	W5KP18
ENSAMXT00000035072	-	285	-	ENSAMXP00000028178	94 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000038122's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038122's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000038122	-	77	52.778	ENSAMXG00000031900	-	89	52.778
ENSAMXG00000038122	-	84	56.962	ENSAMXG00000008613	-	96	56.962
ENSAMXG00000038122	-	94	55.128	ENSAMXG00000037717	-	95	55.128
ENSAMXG00000038122	-	94	51.282	ENSAMXG00000042191	zbtb47a	70	36.979
ENSAMXG00000038122	-	94	55.128	ENSAMXG00000031646	-	93	55.128
ENSAMXG00000038122	-	94	53.846	ENSAMXG00000034344	-	76	53.846
ENSAMXG00000038122	-	84	57.534	ENSAMXG00000043251	-	94	57.534
ENSAMXG00000038122	-	94	56.962	ENSAMXG00000036762	-	96	56.962
ENSAMXG00000038122	-	95	58.228	ENSAMXG00000009776	-	96	58.228
ENSAMXG00000038122	-	94	54.430	ENSAMXG00000039432	-	94	54.430
ENSAMXG00000038122	-	84	55.696	ENSAMXG00000041404	-	96	55.696
ENSAMXG00000038122	-	94	48.571	ENSAMXG00000006669	GFI1	56	38.690
ENSAMXG00000038122	-	98	56.944	ENSAMXG00000035920	-	89	56.944
ENSAMXG00000038122	-	85	57.143	ENSAMXG00000031009	-	81	57.143
ENSAMXG00000038122	-	93	58.025	ENSAMXG00000026144	-	90	46.209
ENSAMXG00000038122	-	94	55.172	ENSAMXG00000026143	-	93	55.172
ENSAMXG00000038122	-	99	56.164	ENSAMXG00000026142	-	86	56.164
ENSAMXG00000038122	-	94	45.714	ENSAMXG00000019757	si:dkey-7l6.3	98	45.588
ENSAMXG00000038122	-	93	54.430	ENSAMXG00000036849	-	90	45.255
ENSAMXG00000038122	-	89	52.381	ENSAMXG00000035683	-	91	52.381
ENSAMXG00000038122	-	95	53.165	ENSAMXG00000042746	-	86	53.165
ENSAMXG00000038122	-	95	50.000	ENSAMXG00000041864	prdm5	92	31.714
ENSAMXG00000038122	-	97	47.887	ENSAMXG00000037382	-	91	40.777
ENSAMXG00000038122	-	93	61.644	ENSAMXG00000030911	-	58	61.644
ENSAMXG00000038122	-	94	53.425	ENSAMXG00000012589	-	97	41.328
ENSAMXG00000038122	-	84	46.154	ENSAMXG00000015228	-	51	42.593
ENSAMXG00000038122	-	98	50.633	ENSAMXG00000042174	-	90	50.633
ENSAMXG00000038122	-	95	53.165	ENSAMXG00000038536	-	86	53.165
ENSAMXG00000038122	-	95	56.410	ENSAMXG00000033201	-	94	56.410
ENSAMXG00000038122	-	94	55.682	ENSAMXG00000036233	-	78	55.682
ENSAMXG00000038122	-	96	55.405	ENSAMXG00000031307	-	58	55.405
ENSAMXG00000038122	-	84	54.430	ENSAMXG00000031496	-	87	54.430
ENSAMXG00000038122	-	53	35.075	ENSAMXG00000042624	SCRT1	59	35.075
ENSAMXG00000038122	-	97	53.165	ENSAMXG00000012604	-	96	53.165
ENSAMXG00000038122	-	94	54.667	ENSAMXG00000041865	-	97	54.667
ENSAMXG00000038122	-	93	58.904	ENSAMXG00000041861	-	84	58.904
ENSAMXG00000038122	-	95	51.220	ENSAMXG00000041862	-	95	51.220
ENSAMXG00000038122	-	96	54.430	ENSAMXG00000032212	-	86	54.430
ENSAMXG00000038122	-	97	56.962	ENSAMXG00000010930	-	81	56.962
ENSAMXG00000038122	-	93	57.812	ENSAMXG00000030530	-	97	56.164
ENSAMXG00000038122	-	84	56.579	ENSAMXG00000037703	-	81	56.579
ENSAMXG00000038122	-	93	56.061	ENSAMXG00000037709	-	81	56.061
ENSAMXG00000038122	-	93	53.571	ENSAMXG00000039752	-	88	53.571
ENSAMXG00000038122	-	53	46.875	ENSAMXG00000038085	scrt1a	59	46.875
ENSAMXG00000038122	-	85	53.165	ENSAMXG00000037326	-	91	53.165
ENSAMXG00000038122	-	84	64.865	ENSAMXG00000041128	-	87	64.865
ENSAMXG00000038122	-	95	58.228	ENSAMXG00000010078	-	86	58.228
ENSAMXG00000038122	-	94	60.274	ENSAMXG00000035127	-	89	60.274
ENSAMXG00000038122	-	84	56.410	ENSAMXG00000007092	-	98	56.410
ENSAMXG00000038122	-	85	55.696	ENSAMXG00000039879	-	98	55.696
ENSAMXG00000038122	-	95	54.054	ENSAMXG00000007973	-	99	39.860
ENSAMXG00000038122	-	83	55.128	ENSAMXG00000041721	-	70	55.128
ENSAMXG00000038122	-	95	55.696	ENSAMXG00000041725	-	88	55.696
ENSAMXG00000038122	-	84	55.128	ENSAMXG00000035690	-	75	47.692
ENSAMXG00000038122	-	93	56.757	ENSAMXG00000041975	-	81	56.757
ENSAMXG00000038122	-	84	56.962	ENSAMXG00000000353	-	93	56.962
ENSAMXG00000038122	-	94	60.256	ENSAMXG00000032237	-	89	60.256
ENSAMXG00000038122	-	84	53.425	ENSAMXG00000041650	-	85	53.425
ENSAMXG00000038122	-	94	51.190	ENSAMXG00000042938	-	89	51.190
ENSAMXG00000038122	-	94	54.545	ENSAMXG00000042167	-	82	48.889
ENSAMXG00000038122	-	93	53.846	ENSAMXG00000038905	-	89	53.846
ENSAMXG00000038122	-	93	55.172	ENSAMXG00000040212	-	83	55.172
ENSAMXG00000038122	-	93	52.564	ENSAMXG00000043541	-	80	52.564
ENSAMXG00000038122	-	94	58.108	ENSAMXG00000039004	-	88	58.108
ENSAMXG00000038122	-	97	58.228	ENSAMXG00000040630	-	98	58.228
ENSAMXG00000038122	-	93	57.692	ENSAMXG00000043019	-	88	57.692
ENSAMXG00000038122	-	95	53.165	ENSAMXG00000043978	-	85	53.165
ENSAMXG00000038122	-	94	52.055	ENSAMXG00000042784	-	91	50.000
ENSAMXG00000038122	-	100	52.703	ENSAMXG00000009563	-	92	52.703
ENSAMXG00000038122	-	93	64.103	ENSAMXG00000029783	-	87	64.103
ENSAMXG00000038122	-	94	56.757	ENSAMXG00000017959	-	94	56.757
ENSAMXG00000038122	-	93	57.534	ENSAMXG00000039744	-	99	57.534
ENSAMXG00000038122	-	93	54.762	ENSAMXG00000035875	-	99	54.762
ENSAMXG00000038122	-	94	55.696	ENSAMXG00000037923	-	99	55.696
ENSAMXG00000038122	-	94	53.448	ENSAMXG00000017609	-	72	53.448
ENSAMXG00000038122	-	84	56.962	ENSAMXG00000024978	-	96	56.962
ENSAMXG00000038122	-	68	46.875	ENSAMXG00000034158	scrt2	51	46.875
ENSAMXG00000038122	-	94	54.217	ENSAMXG00000040806	-	90	54.217
ENSAMXG00000038122	-	97	55.696	ENSAMXG00000019489	-	85	55.696
ENSAMXG00000038122	-	93	57.534	ENSAMXG00000010805	-	94	57.534
ENSAMXG00000038122	-	89	51.899	ENSAMXG00000033252	-	95	45.455
ENSAMXG00000038122	-	93	55.696	ENSAMXG00000003002	-	87	55.696
ENSAMXG00000038122	-	96	55.696	ENSAMXG00000039408	-	91	55.696
ENSAMXG00000038122	-	90	47.500	ENSAMXG00000034934	-	85	39.610
ENSAMXG00000038122	-	98	53.750	ENSAMXG00000044028	-	95	53.750
ENSAMXG00000038122	-	94	57.895	ENSAMXG00000039016	-	81	57.895
ENSAMXG00000038122	-	95	53.846	ENSAMXG00000035286	si:ch1073-224n8.1	77	53.846
ENSAMXG00000038122	-	94	47.500	ENSAMXG00000035246	-	61	47.500
ENSAMXG00000038122	-	95	53.165	ENSAMXG00000036257	-	91	53.165
ENSAMXG00000038122	-	97	50.000	ENSAMXG00000013492	-	97	43.750
ENSAMXG00000038122	-	94	54.430	ENSAMXG00000042774	-	92	54.430
ENSAMXG00000038122	-	93	55.172	ENSAMXG00000039162	-	94	55.172
ENSAMXG00000038122	-	95	54.795	ENSAMXG00000037981	-	74	54.795
ENSAMXG00000038122	-	94	55.696	ENSAMXG00000036567	-	74	55.696
ENSAMXG00000038122	-	94	53.846	ENSAMXG00000042633	-	90	53.846
ENSAMXG00000038122	-	96	61.538	ENSAMXG00000030659	-	78	61.538
ENSAMXG00000038122	-	94	56.962	ENSAMXG00000037760	-	95	56.962
ENSAMXG00000038122	-	93	53.165	ENSAMXG00000039770	-	79	53.165
ENSAMXG00000038122	-	96	45.122	ENSAMXG00000032642	znf408	58	36.264
ENSAMXG00000038122	-	93	57.692	ENSAMXG00000043291	-	62	57.692
ENSAMXG00000038122	-	84	58.904	ENSAMXG00000035809	-	99	58.904
ENSAMXG00000038122	-	94	53.165	ENSAMXG00000032457	-	90	53.165
ENSAMXG00000038122	-	96	57.143	ENSAMXG00000034857	-	64	57.143
ENSAMXG00000038122	-	95	53.571	ENSAMXG00000034958	-	90	53.571
ENSAMXG00000038122	-	94	53.448	ENSAMXG00000029161	-	80	53.846
ENSAMXG00000038122	-	95	56.962	ENSAMXG00000029828	-	95	56.962
ENSAMXG00000038122	-	94	52.632	ENSAMXG00000012873	-	90	52.564
ENSAMXG00000038122	-	93	56.944	ENSAMXG00000037143	-	93	56.944
ENSAMXG00000038122	-	94	52.000	ENSAMXG00000036915	-	91	52.000
ENSAMXG00000038122	-	68	31.419	ENSAMXG00000039622	zbtb41	55	31.419
ENSAMXG00000038122	-	96	58.974	ENSAMXG00000025452	-	94	58.974
ENSAMXG00000038122	-	84	56.000	ENSAMXG00000025455	-	98	56.000
ENSAMXG00000038122	-	94	54.430	ENSAMXG00000039700	-	81	54.430
ENSAMXG00000038122	-	98	57.534	ENSAMXG00000032619	-	96	57.534
ENSAMXG00000038122	-	93	54.839	ENSAMXG00000033124	-	62	50.000
ENSAMXG00000038122	-	93	54.430	ENSAMXG00000040677	-	80	54.430
ENSAMXG00000038122	-	93	56.410	ENSAMXG00000039182	-	64	56.410
ENSAMXG00000038122	-	84	54.430	ENSAMXG00000038636	-	93	54.430
ENSAMXG00000038122	-	85	46.250	ENSAMXG00000039849	snai1b	56	38.356
ENSAMXG00000038122	-	94	46.341	ENSAMXG00000044034	-	94	34.320
ENSAMXG00000038122	-	93	58.108	ENSAMXG00000029878	-	90	58.108
ENSAMXG00000038122	-	89	56.962	ENSAMXG00000035949	-	76	56.962
ENSAMXG00000038122	-	93	52.874	ENSAMXG00000034096	-	88	43.396
ENSAMXG00000038122	-	95	51.613	ENSAMXG00000037544	GFI1B	50	38.750
ENSAMXG00000038122	-	98	53.165	ENSAMXG00000036633	-	61	53.165
ENSAMXG00000038122	-	93	52.500	ENSAMXG00000036241	-	82	51.899
ENSAMXG00000038122	-	95	49.367	ENSAMXG00000032841	-	76	49.367
ENSAMXG00000038122	-	95	48.529	ENSAMXG00000007441	-	57	48.529
ENSAMXG00000038122	-	94	53.750	ENSAMXG00000013274	-	89	53.750
ENSAMXG00000038122	-	89	54.762	ENSAMXG00000041609	-	92	54.762
ENSAMXG00000038122	-	94	59.375	ENSAMXG00000033500	-	93	59.375
ENSAMXG00000038122	-	94	54.878	ENSAMXG00000029960	-	94	54.878
ENSAMXG00000038122	-	70	32.407	ENSAMXG00000035525	znf646	72	32.407
ENSAMXG00000038122	-	89	39.773	ENSAMXG00000033001	-	62	38.129
ENSAMXG00000038122	-	94	54.430	ENSAMXG00000038453	-	82	54.430
ENSAMXG00000038122	-	84	54.795	ENSAMXG00000004610	-	96	54.795
ENSAMXG00000038122	-	93	56.410	ENSAMXG00000029518	-	55	52.174
ENSAMXG00000038122	-	95	59.494	ENSAMXG00000034847	-	84	59.494
ENSAMXG00000038122	-	94	46.835	ENSAMXG00000024907	znf319b	84	38.835
ENSAMXG00000038122	-	94	52.564	ENSAMXG00000044110	-	88	52.564
ENSAMXG00000038122	-	84	58.228	ENSAMXG00000011804	-	86	58.228
ENSAMXG00000038122	-	84	55.072	ENSAMXG00000030963	-	52	55.072
ENSAMXG00000038122	-	84	57.576	ENSAMXG00000029178	-	96	57.576
ENSAMXG00000038122	-	93	55.952	ENSAMXG00000034402	-	91	55.952
ENSAMXG00000038122	-	94	55.696	ENSAMXG00000025965	-	94	55.696
ENSAMXG00000038122	-	83	57.692	ENSAMXG00000018161	-	95	57.692
ENSAMXG00000038122	-	100	50.000	ENSAMXG00000014745	-	83	49.275
ENSAMXG00000038122	-	94	49.398	ENSAMXG00000044096	-	73	49.398
ENSAMXG00000038122	-	96	50.588	ENSAMXG00000034333	-	90	50.526
ENSAMXG00000038122	-	93	44.872	ENSAMXG00000033405	zbtb14	53	38.750
ENSAMXG00000038122	-	95	48.864	ENSAMXG00000033299	-	92	31.057
ENSAMXG00000038122	-	94	56.164	ENSAMXG00000035437	-	97	56.164
ENSAMXG00000038122	-	84	46.835	ENSAMXG00000038235	snai2	64	40.152
ENSAMXG00000038122	-	93	56.164	ENSAMXG00000035145	-	59	56.164
ENSAMXG00000038122	-	94	52.778	ENSAMXG00000042593	-	90	52.778
ENSAMXG00000038122	-	94	54.430	ENSAMXG00000001626	-	89	54.430
ENSAMXG00000038122	-	99	53.488	ENSAMXG00000033013	-	81	53.488
ENSAMXG00000038122	-	94	54.430	ENSAMXG00000030742	-	98	54.430
ENSAMXG00000038122	-	94	54.023	ENSAMXG00000038284	-	91	54.023
ENSAMXG00000038122	-	94	56.962	ENSAMXG00000038280	-	87	56.962
ENSAMXG00000038122	-	94	58.228	ENSAMXG00000042275	-	90	58.228
ENSAMXG00000038122	-	96	51.250	ENSAMXG00000029660	-	74	37.755
ENSAMXG00000038122	-	99	64.557	ENSAMXG00000031844	-	90	64.557
ENSAMXG00000038122	-	94	44.578	ENSAMXG00000029059	-	62	44.578
ENSAMXG00000038122	-	99	58.904	ENSAMXG00000009558	-	93	58.904
ENSAMXG00000038122	-	93	56.962	ENSAMXG00000031501	-	88	42.541
ENSAMXG00000038122	-	96	53.846	ENSAMXG00000043302	-	76	53.846
ENSAMXG00000038122	-	97	60.000	ENSAMXG00000035349	-	58	42.105
ENSAMXG00000038122	-	94	45.570	ENSAMXG00000025761	-	89	32.601
ENSAMXG00000038122	-	93	57.333	ENSAMXG00000038324	-	71	57.333
ENSAMXG00000038122	-	93	55.128	ENSAMXG00000038325	-	90	55.128
ENSAMXG00000038122	-	93	54.430	ENSAMXG00000031794	-	95	54.430
ENSAMXG00000038122	-	93	56.962	ENSAMXG00000037885	-	97	56.962
ENSAMXG00000038122	-	96	61.905	ENSAMXG00000034873	-	80	60.000
ENSAMXG00000038122	-	94	50.602	ENSAMXG00000043178	-	64	50.602
ENSAMXG00000038122	-	93	55.128	ENSAMXG00000031489	-	94	55.128
ENSAMXG00000038122	-	93	55.696	ENSAMXG00000039977	-	95	48.951
ENSAMXG00000038122	-	94	53.165	ENSAMXG00000044107	-	87	53.165
ENSAMXG00000038122	-	94	55.128	ENSAMXG00000029109	-	86	55.128
ENSAMXG00000038122	-	93	55.696	ENSAMXG00000043423	-	74	55.696

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038122	-	94	57.692	ENSACAG00000026906	-	99	57.692	Anolis_carolinensis
ENSAMXG00000038122	-	68	43.116	ENSACAG00000026916	-	79	53.846	Anolis_carolinensis
ENSAMXG00000038122	-	95	60.256	ENSACAG00000027001	-	97	60.256	Anolis_carolinensis
ENSAMXG00000038122	-	94	53.012	ENSDARG00000096614	si:dkey-182i3.10	99	37.500	Danio_rerio
ENSAMXG00000038122	-	95	55.696	ENSELUG00000011838	-	64	55.696	Esox_lucius
ENSAMXG00000038122	-	99	56.061	ENSELUG00000018970	-	77	55.224	Esox_lucius
ENSAMXG00000038122	-	95	52.308	ENSELUG00000013806	-	71	41.935	Esox_lucius
ENSAMXG00000038122	-	97	51.351	ENSELUG00000021525	-	85	41.837	Esox_lucius
ENSAMXG00000038122	-	97	54.762	ENSELUG00000000485	-	87	54.762	Esox_lucius
ENSAMXG00000038122	-	94	51.220	ENSGACG00000001523	-	97	51.220	Gasterosteus_aculeatus
ENSAMXG00000038122	-	86	50.000	ENSHBUG00000016384	-	77	50.000	Haplochromis_burtoni
ENSAMXG00000038122	-	95	46.835	ENSHCOG00000001629	-	62	46.835	Hippocampus_comes
ENSAMXG00000038122	-	98	47.500	ENSHCOG00000017456	-	86	47.500	Hippocampus_comes
ENSAMXG00000038122	-	93	51.250	ENSLBEG00000013235	-	74	51.250	Labrus_bergylta
ENSAMXG00000038122	-	94	50.000	ENSMGAG00000016603	-	100	30.744	Meleagris_gallopavo
ENSAMXG00000038122	-	94	55.682	ENSPNAG00000009176	-	85	55.682	Pygocentrus_nattereri
ENSAMXG00000038122	-	98	51.899	ENSPNAG00000009184	-	83	51.899	Pygocentrus_nattereri
ENSAMXG00000038122	-	94	50.000	ENSSFOG00015020993	-	82	42.857	Scleropages_formosus
ENSAMXG00000038122	-	95	49.398	ENSTNIG00000002343	-	83	49.398	Tetraodon_nigroviridis
ENSAMXG00000038122	-	94	43.939	ENSTNIG00000000528	-	93	43.939	Tetraodon_nigroviridis
ENSAMXG00000038122	-	100	55.294	ENSXMAG00000020042	-	65	55.294	Xiphophorus_maculatus