EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000038155 (Gene tree)
Gene ID: 111191621
Gene Symbol: -
Alias: -
Full Name: eukaryotic translation initiation factor 4 gamma 1-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 8484 bases
Position: chrAPWO02000032.1:4972631-4981114
Accession: 111191621
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000042695	MIF4G	PF02854.19	2.7e-53	1	1
ENSAMXP00000048096	MIF4G	PF02854.19	2.8e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000055942	-	3197	XM_022667140	ENSAMXP00000048096	791 (aa)	XP_022522861	-
ENSAMXT00000030169	-	3134	XM_022667142	ENSAMXP00000042695	770 (aa)	XP_022522863	UPI000BBD6FB3

Gene Model

Click here to download ENSAMXG00000038155's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038155's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000038155	-	51	51.208	ENSAMXG00000035906	-	76	51.208

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038155	-	50	51.905	ENSPLAG00000022502	-	62	51.905	Poecilia_latipinna
ENSAMXG00000038155	-	50	51.429	ENSPMEG00000011740	-	62	51.429	Poecilia_mexicana