EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000038169 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 4920 bases
Position: chrAPWO02000182.1:892613-897532
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000027660	RVT_1	PF00078.27	6.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000044431	-	4920	-	ENSAMXP00000027660	1248 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000038169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038169's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000038169	-	68	42.578	ENSAMXG00000034382	-	76	42.578
ENSAMXG00000038169	-	58	47.159	ENSAMXG00000037673	-	89	47.159
ENSAMXG00000038169	-	62	33.467	ENSAMXG00000030908	-	67	33.467
ENSAMXG00000038169	-	67	37.795	ENSAMXG00000041369	-	75	37.795
ENSAMXG00000038169	-	61	37.061	ENSAMXG00000043312	-	50	37.061
ENSAMXG00000038169	-	66	32.803	ENSAMXG00000036680	-	56	32.934
ENSAMXG00000038169	-	51	38.876	ENSAMXG00000037157	-	74	38.876
ENSAMXG00000038169	-	57	40.764	ENSAMXG00000038033	-	78	40.764
ENSAMXG00000038169	-	53	42.765	ENSAMXG00000035923	-	86	42.765
ENSAMXG00000038169	-	67	40.413	ENSAMXG00000038578	-	65	40.161
ENSAMXG00000038169	-	61	36.957	ENSAMXG00000030022	-	64	36.957
ENSAMXG00000038169	-	65	37.500	ENSAMXG00000044052	-	53	37.500
ENSAMXG00000038169	-	72	41.434	ENSAMXG00000032559	-	82	41.434
ENSAMXG00000038169	-	69	32.627	ENSAMXG00000040613	-	61	32.627
ENSAMXG00000038169	-	63	37.961	ENSAMXG00000039110	-	58	37.961
ENSAMXG00000038169	-	65	43.133	ENSAMXG00000039114	-	82	43.133
ENSAMXG00000038169	-	64	41.800	ENSAMXG00000038338	-	61	41.800
ENSAMXG00000038169	-	66	35.815	ENSAMXG00000035138	-	57	35.815
ENSAMXG00000038169	-	54	34.346	ENSAMXG00000042050	-	52	34.346
ENSAMXG00000038169	-	57	39.920	ENSAMXG00000043892	-	96	40.263
ENSAMXG00000038169	-	66	36.364	ENSAMXG00000039912	-	57	36.364
ENSAMXG00000038169	-	68	40.891	ENSAMXG00000033629	-	50	40.891
ENSAMXG00000038169	-	63	38.644	ENSAMXG00000030902	-	57	38.379
ENSAMXG00000038169	-	75	38.690	ENSAMXG00000040892	-	59	39.830
ENSAMXG00000038169	-	61	39.331	ENSAMXG00000032330	-	54	39.331
ENSAMXG00000038169	-	96	58.939	ENSAMXG00000030987	-	84	59.317
ENSAMXG00000038169	-	61	37.240	ENSAMXG00000036113	-	71	37.240
ENSAMXG00000038169	-	64	39.093	ENSAMXG00000033138	-	58	39.093
ENSAMXG00000038169	-	80	36.152	ENSAMXG00000031698	-	67	35.940
ENSAMXG00000038169	-	61	37.061	ENSAMXG00000038997	-	50	37.061
ENSAMXG00000038169	-	56	39.762	ENSAMXG00000031305	-	72	39.762
ENSAMXG00000038169	-	65	41.319	ENSAMXG00000040885	-	63	41.319
ENSAMXG00000038169	-	65	39.286	ENSAMXG00000040149	-	52	39.286
ENSAMXG00000038169	-	55	42.000	ENSAMXG00000038310	-	76	42.000
ENSAMXG00000038169	-	65	39.762	ENSAMXG00000042521	-	63	39.762
ENSAMXG00000038169	-	59	42.495	ENSAMXG00000035335	-	55	42.495
ENSAMXG00000038169	-	67	39.815	ENSAMXG00000043385	-	66	39.815
ENSAMXG00000038169	-	66	37.719	ENSAMXG00000032783	-	62	37.719
ENSAMXG00000038169	-	54	42.529	ENSAMXG00000037864	-	60	42.529
ENSAMXG00000038169	-	54	38.546	ENSAMXG00000039473	-	62	38.546
ENSAMXG00000038169	-	60	42.380	ENSAMXG00000030479	-	56	42.380
ENSAMXG00000038169	-	65	38.955	ENSAMXG00000040695	-	56	38.955
ENSAMXG00000038169	-	68	42.659	ENSAMXG00000033912	-	70	42.157
ENSAMXG00000038169	-	65	42.333	ENSAMXG00000029230	-	55	42.333
ENSAMXG00000038169	-	64	40.460	ENSAMXG00000032571	-	59	40.460
ENSAMXG00000038169	-	63	33.333	ENSAMXG00000041082	-	58	33.333
ENSAMXG00000038169	-	68	40.463	ENSAMXG00000038531	-	63	40.463

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038169	-	83	45.379	ENSAPOG00000012135	-	94	45.379	Acanthochromis_polyacanthus
ENSAMXG00000038169	-	72	50.055	ENSAPOG00000008045	-	95	50.055	Acanthochromis_polyacanthus
ENSAMXG00000038169	-	76	42.928	ENSACLG00000010042	-	80	42.928	Astatotilapia_calliptera
ENSAMXG00000038169	-	73	39.372	ENSACLG00000013572	-	59	39.267	Astatotilapia_calliptera
ENSAMXG00000038169	-	95	46.086	ENSACLG00000014619	-	84	46.247	Astatotilapia_calliptera
ENSAMXG00000038169	-	95	46.086	ENSACLG00000019876	-	83	46.086	Astatotilapia_calliptera
ENSAMXG00000038169	-	76	39.474	ENSACLG00000001563	-	100	39.474	Astatotilapia_calliptera
ENSAMXG00000038169	-	95	41.352	ENSACLG00000026879	-	83	41.352	Astatotilapia_calliptera
ENSAMXG00000038169	-	54	38.408	ENSACLG00000015735	-	86	38.408	Astatotilapia_calliptera
ENSAMXG00000038169	-	83	48.628	ENSACLG00000027730	-	93	48.628	Astatotilapia_calliptera
ENSAMXG00000038169	-	83	35.861	ENSACLG00000017808	-	70	35.504	Astatotilapia_calliptera
ENSAMXG00000038169	-	62	50.063	ENSACLG00000007343	-	95	50.258	Astatotilapia_calliptera
ENSAMXG00000038169	-	67	39.408	ENSACLG00000027291	-	55	38.838	Astatotilapia_calliptera
ENSAMXG00000038169	-	95	40.753	ENSACLG00000025719	-	82	40.753	Astatotilapia_calliptera
ENSAMXG00000038169	-	83	35.861	ENSACLG00000014870	-	70	35.504	Astatotilapia_calliptera
ENSAMXG00000038169	-	95	40.512	ENSACLG00000024091	-	82	40.512	Astatotilapia_calliptera
ENSAMXG00000038169	-	67	40.321	ENSACLG00000018181	-	92	39.863	Astatotilapia_calliptera
ENSAMXG00000038169	-	83	35.950	ENSACLG00000000499	-	70	35.593	Astatotilapia_calliptera
ENSAMXG00000038169	-	58	56.772	ENSACLG00000008862	-	100	56.772	Astatotilapia_calliptera
ENSAMXG00000038169	-	80	38.496	ENSACLG00000018060	-	68	38.496	Astatotilapia_calliptera
ENSAMXG00000038169	-	66	40.736	ENSACLG00000002180	-	57	40.621	Astatotilapia_calliptera
ENSAMXG00000038169	-	95	41.242	ENSACLG00000017161	-	82	41.355	Astatotilapia_calliptera
ENSAMXG00000038169	-	68	46.313	ENSACLG00000000367	-	93	46.682	Astatotilapia_calliptera
ENSAMXG00000038169	-	58	53.197	ENSACLG00000004062	-	99	53.197	Astatotilapia_calliptera
ENSAMXG00000038169	-	95	40.448	ENSACLG00000009628	-	82	40.448	Astatotilapia_calliptera
ENSAMXG00000038169	-	64	43.643	ENSCPBG00000011626	-	98	43.643	Chrysemys_picta_bellii
ENSAMXG00000038169	-	62	38.923	ENSCVAG00000009912	-	98	38.930	Cyprinodon_variegatus
ENSAMXG00000038169	-	72	37.474	ENSELUG00000000948	-	80	36.820	Esox_lucius
ENSAMXG00000038169	-	67	35.281	ENSFHEG00000000971	-	78	35.281	Fundulus_heteroclitus
ENSAMXG00000038169	-	58	50.543	ENSGAFG00000009062	-	98	50.340	Gambusia_affinis
ENSAMXG00000038169	-	63	41.800	ENSGAGG00000025282	-	70	41.800	Gopherus_agassizii
ENSAMXG00000038169	-	74	43.954	ENSGAGG00000022240	-	60	43.954	Gopherus_agassizii
ENSAMXG00000038169	-	69	47.232	ENSGAGG00000014450	-	80	47.232	Gopherus_agassizii
ENSAMXG00000038169	-	64	46.437	ENSGAGG00000012039	-	99	46.437	Gopherus_agassizii
ENSAMXG00000038169	-	64	46.437	ENSGAGG00000020521	-	99	46.437	Gopherus_agassizii
ENSAMXG00000038169	-	67	69.870	ENSIPUG00000000601	-	95	69.870	Ictalurus_punctatus
ENSAMXG00000038169	-	76	34.660	ENSMAMG00000018393	-	95	34.236	Mastacembelus_armatus
ENSAMXG00000038169	-	80	37.581	ENSMZEG00005000633	-	99	37.116	Maylandia_zebra
ENSAMXG00000038169	-	52	47.820	ENSMALG00000019305	-	100	47.820	Monopterus_albus
ENSAMXG00000038169	-	65	40.860	ENSORLG00000028632	-	79	40.640	Oryzias_latipes
ENSAMXG00000038169	-	95	41.686	ENSORLG00000030265	-	82	41.570	Oryzias_latipes
ENSAMXG00000038169	-	75	38.525	ENSORLG00000026629	-	62	38.525	Oryzias_latipes
ENSAMXG00000038169	-	59	50.732	ENSORLG00000025478	-	98	50.732	Oryzias_latipes
ENSAMXG00000038169	-	95	42.419	ENSORLG00000028795	-	83	42.419	Oryzias_latipes
ENSAMXG00000038169	-	95	42.581	ENSORLG00000030542	-	83	42.581	Oryzias_latipes
ENSAMXG00000038169	-	95	41.764	ENSORLG00000025739	-	82	41.764	Oryzias_latipes
ENSAMXG00000038169	-	95	42.419	ENSORLG00000028609	-	83	42.419	Oryzias_latipes
ENSAMXG00000038169	-	95	41.713	ENSORLG00000024904	-	83	41.713	Oryzias_latipes
ENSAMXG00000038169	-	95	40.971	ENSORLG00000026665	-	83	40.971	Oryzias_latipes
ENSAMXG00000038169	-	95	42.076	ENSORLG00000024220	-	82	42.076	Oryzias_latipes
ENSAMXG00000038169	-	77	37.290	ENSORLG00000029675	-	63	36.795	Oryzias_latipes
ENSAMXG00000038169	-	95	41.686	ENSORLG00000027568	-	82	41.570	Oryzias_latipes
ENSAMXG00000038169	-	75	38.525	ENSORLG00000023181	-	62	38.525	Oryzias_latipes
ENSAMXG00000038169	-	75	38.627	ENSORLG00000026676	-	99	38.627	Oryzias_latipes
ENSAMXG00000038169	-	95	40.125	ENSORLG00000027831	-	85	40.125	Oryzias_latipes
ENSAMXG00000038169	-	95	40.491	ENSORLG00000024233	-	83	40.571	Oryzias_latipes
ENSAMXG00000038169	-	87	41.865	ENSORLG00000022369	-	80	41.865	Oryzias_latipes
ENSAMXG00000038169	-	95	40.571	ENSORLG00000026546	-	83	40.571	Oryzias_latipes
ENSAMXG00000038169	-	77	37.488	ENSORLG00000029874	-	63	36.993	Oryzias_latipes
ENSAMXG00000038169	-	75	38.627	ENSORLG00000026873	-	62	38.627	Oryzias_latipes
ENSAMXG00000038169	-	95	41.764	ENSORLG00020008293	-	82	41.764	Oryzias_latipes_hni
ENSAMXG00000038169	-	95	42.038	ENSORLG00020001422	-	82	42.038	Oryzias_latipes_hni
ENSAMXG00000038169	-	93	41.432	ENSORLG00020020268	-	82	41.432	Oryzias_latipes_hni
ENSAMXG00000038169	-	95	41.634	ENSORLG00020003869	-	82	41.634	Oryzias_latipes_hni
ENSAMXG00000038169	-	95	41.475	ENSORLG00020014203	-	82	41.475	Oryzias_latipes_hni
ENSAMXG00000038169	-	95	42.661	ENSORLG00015018878	-	83	42.661	Oryzias_latipes_hsok
ENSAMXG00000038169	-	95	42.524	ENSORLG00015017778	-	83	42.524	Oryzias_latipes_hsok
ENSAMXG00000038169	-	83	35.587	ENSOMEG00000009987	-	72	35.116	Oryzias_melastigma
ENSAMXG00000038169	-	95	41.368	ENSOMEG00000003712	-	83	41.368	Oryzias_melastigma
ENSAMXG00000038169	-	52	38.179	ENSOMEG00000006705	-	93	37.885	Oryzias_melastigma
ENSAMXG00000038169	-	51	40.916	ENSPKIG00000000391	-	99	40.473	Paramormyrops_kingsleyae
ENSAMXG00000038169	-	59	61.404	ENSPSIG00000013781	-	100	61.404	Pelodiscus_sinensis
ENSAMXG00000038169	-	64	55.283	ENSPSIG00000001658	-	94	55.283	Pelodiscus_sinensis
ENSAMXG00000038169	-	93	45.033	ENSPSIG00000000994	-	87	45.277	Pelodiscus_sinensis
ENSAMXG00000038169	-	84	48.962	ENSPSIG00000000489	-	84	45.315	Pelodiscus_sinensis
ENSAMXG00000038169	-	94	45.125	ENSPSIG00000000767	-	90	45.125	Pelodiscus_sinensis
ENSAMXG00000038169	-	84	49.486	ENSPSIG00000000353	-	91	49.486	Pelodiscus_sinensis
ENSAMXG00000038169	-	61	50.509	ENSPMEG00000019585	-	99	50.641	Poecilia_mexicana
ENSAMXG00000038169	-	83	42.908	ENSPMEG00000016355	-	89	42.908	Poecilia_mexicana
ENSAMXG00000038169	-	67	39.071	ENSPREG00000004954	-	58	38.618	Poecilia_reticulata
ENSAMXG00000038169	-	69	38.386	ENSPREG00000000390	-	58	38.059	Poecilia_reticulata
ENSAMXG00000038169	-	83	44.066	ENSSDUG00000002460	-	99	40.556	Seriola_dumerili
ENSAMXG00000038169	-	84	34.951	ENSXMAG00000026594	-	73	34.501	Xiphophorus_maculatus
ENSAMXG00000038169	-	78	36.081	ENSXMAG00000030089	-	97	35.597	Xiphophorus_maculatus
ENSAMXG00000038169	-	67	38.063	ENSXMAG00000023319	-	55	37.810	Xiphophorus_maculatus
ENSAMXG00000038169	-	83	34.091	ENSXMAG00000023503	-	71	33.607	Xiphophorus_maculatus
ENSAMXG00000038169	-	84	34.802	ENSXMAG00000021213	-	73	34.353	Xiphophorus_maculatus
ENSAMXG00000038169	-	83	34.091	ENSXMAG00000023079	-	71	33.607	Xiphophorus_maculatus
ENSAMXG00000038169	-	88	40.905	ENSXMAG00000030100	-	83	41.161	Xiphophorus_maculatus
ENSAMXG00000038169	-	95	41.833	ENSXMAG00000026031	-	83	42.072	Xiphophorus_maculatus
ENSAMXG00000038169	-	67	37.950	ENSXMAG00000021298	-	55	37.698	Xiphophorus_maculatus