EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000038175 (Gene tree)
Gene ID: 103044522
Gene Symbol: pop5
Alias: fc69d03|wu:fc69d03|wu:fy24c05|zgc:110616
Full Name: POP5 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 4540 bases
Position: chr6:31827186-31831725
Accession: 103044522
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000036850	RNase_P_Rpp14	PF01900.19	5.2e-26	1	1
ENSAMXP00000042173	RNase_P_Rpp14	PF01900.19	6.4e-26	1	1
ENSAMXP00000037802	RNase_P_Rpp14	PF01900.19	7.5e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000032848	-	2056	XM_007229335	ENSAMXP00000042173	172 (aa)	XP_007229397	UPI000440E715
ENSAMXT00000047345	-	2148	-	ENSAMXP00000037802	182 (aa)	-	-
ENSAMXT00000049858	-	3283	-	ENSAMXP00000036850	163 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000038175's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03008	Ribosome biogenesis in eukaryotes	KEGG
amex03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038175's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038175	pop5	85	53.691	ENSG00000167272	POP5	92	52.980	Homo_sapiens
ENSAMXG00000038175	pop5	85	60.544	ENSAPOG00000023686	POP5	88	60.544	Acanthochromis_polyacanthus
ENSAMXG00000038175	pop5	91	50.314	ENSAMEG00000008503	POP5	88	52.288	Ailuropoda_melanoleuca
ENSAMXG00000038175	pop5	85	68.027	ENSACIG00000018362	pop5	89	68.027	Amphilophus_citrinellus
ENSAMXG00000038175	pop5	85	62.585	ENSAOCG00000001930	pop5	89	61.745	Amphiprion_ocellaris
ENSAMXG00000038175	pop5	85	63.265	ENSAPEG00000006795	pop5	89	62.416	Amphiprion_percula
ENSAMXG00000038175	pop5	91	61.538	ENSATEG00000016792	pop5	89	63.087	Anabas_testudineus
ENSAMXG00000038175	pop5	55	56.842	ENSAPLG00000015761	POP5	89	56.250	Anas_platyrhynchos
ENSAMXG00000038175	pop5	94	44.720	ENSACAG00000003091	POP5	89	47.619	Anolis_carolinensis
ENSAMXG00000038175	pop5	85	54.362	ENSANAG00000023744	POP5	92	53.642	Aotus_nancymaae
ENSAMXG00000038175	pop5	88	65.132	ENSACLG00000021131	-	90	65.132	Astatotilapia_calliptera
ENSAMXG00000038175	pop5	92	48.750	ENSBTAG00000005385	POP5	84	52.817	Bos_taurus
ENSAMXG00000038175	pop5	85	53.691	ENSCJAG00000001309	POP5	92	52.980	Callithrix_jacchus
ENSAMXG00000038175	pop5	91	50.955	ENSCAFG00000010389	POP5	88	52.980	Canis_familiaris
ENSAMXG00000038175	pop5	91	50.955	ENSCAFG00020020663	POP5	88	52.980	Canis_lupus_dingo
ENSAMXG00000038175	pop5	92	48.750	ENSCHIG00000016402	POP5	88	51.333	Capra_hircus
ENSAMXG00000038175	pop5	83	53.846	ENSTSYG00000027616	POP5	89	52.980	Carlito_syrichta
ENSAMXG00000038175	pop5	62	51.402	ENSCAPG00000016873	POP5	77	59.770	Cavia_aperea
ENSAMXG00000038175	pop5	94	48.466	ENSCPOG00000012337	POP5	85	53.147	Cavia_porcellus
ENSAMXG00000038175	pop5	85	53.691	ENSCCAG00000023154	POP5	92	52.980	Cebus_capucinus
ENSAMXG00000038175	pop5	85	53.691	ENSCATG00000036825	POP5	92	52.980	Cercocebus_atys
ENSAMXG00000038175	pop5	94	47.531	ENSCLAG00000007808	POP5	89	50.667	Chinchilla_lanigera
ENSAMXG00000038175	pop5	85	53.691	ENSCSAG00000002246	POP5	92	52.980	Chlorocebus_sabaeus
ENSAMXG00000038175	pop5	83	47.552	ENSCHOG00000013969	POP5	86	47.297	Choloepus_hoffmanni
ENSAMXG00000038175	pop5	98	48.521	ENSCPBG00000011331	POP5	90	51.316	Chrysemys_picta_bellii
ENSAMXG00000038175	pop5	85	53.691	ENSCANG00000028001	POP5	92	52.980	Colobus_angolensis_palliatus
ENSAMXG00000038175	pop5	94	50.920	ENSCGRG00001017974	Pop5	89	54.305	Cricetulus_griseus_chok1gshd
ENSAMXG00000038175	pop5	94	50.920	ENSCGRG00000010102	Pop5	89	54.305	Cricetulus_griseus_crigri
ENSAMXG00000038175	pop5	85	59.864	ENSCSEG00000008332	-	88	59.864	Cynoglossus_semilaevis
ENSAMXG00000038175	pop5	79	58.824	ENSCSEG00000011103	pop5	91	58.824	Cynoglossus_semilaevis
ENSAMXG00000038175	pop5	98	38.012	ENSCVAG00000009152	-	87	40.000	Cyprinodon_variegatus
ENSAMXG00000038175	pop5	89	65.161	ENSDARG00000053452	pop5	91	66.013	Danio_rerio
ENSAMXG00000038175	pop5	83	53.846	ENSDNOG00000045952	-	86	53.378	Dasypus_novemcinctus
ENSAMXG00000038175	pop5	83	53.103	ENSDNOG00000012668	-	78	52.667	Dasypus_novemcinctus
ENSAMXG00000038175	pop5	83	54.545	ENSDORG00000029401	Pop5	89	53.642	Dipodomys_ordii
ENSAMXG00000038175	pop5	94	49.080	ENSETEG00000009283	POP5	90	50.649	Echinops_telfairi
ENSAMXG00000038175	pop5	96	43.030	ENSEBUG00000016369	pop5	88	45.833	Eptatretus_burgeri
ENSAMXG00000038175	pop5	83	55.245	ENSEASG00005004714	POP5	88	54.305	Equus_asinus_asinus
ENSAMXG00000038175	pop5	83	55.245	ENSECAG00000010012	POP5	88	54.305	Equus_caballus
ENSAMXG00000038175	pop5	98	57.988	ENSELUG00000023394	pop5	91	63.265	Esox_lucius
ENSAMXG00000038175	pop5	97	48.214	ENSFCAG00000042614	POP5	88	53.642	Felis_catus
ENSAMXG00000038175	pop5	87	51.678	ENSFALG00000007537	POP5	89	51.678	Ficedula_albicollis
ENSAMXG00000038175	pop5	94	46.584	ENSFDAG00000009972	POP5	89	50.000	Fukomys_damarensis
ENSAMXG00000038175	pop5	97	56.886	ENSFHEG00000022341	pop5	89	61.905	Fundulus_heteroclitus
ENSAMXG00000038175	pop5	77	59.200	ENSGMOG00000001073	pop5	99	59.542	Gadus_morhua
ENSAMXG00000038175	pop5	83	48.951	ENSGALG00000007124	POP5	51	48.951	Gallus_gallus
ENSAMXG00000038175	pop5	86	61.486	ENSGAFG00000005937	-	88	61.905	Gambusia_affinis
ENSAMXG00000038175	pop5	94	57.764	ENSGACG00000012710	-	91	60.403	Gasterosteus_aculeatus
ENSAMXG00000038175	pop5	98	47.929	ENSGAGG00000016005	POP5	90	50.658	Gopherus_agassizii
ENSAMXG00000038175	pop5	85	53.691	ENSGGOG00000013505	POP5	92	52.980	Gorilla_gorilla
ENSAMXG00000038175	pop5	88	64.474	ENSHBUG00000011718	-	90	64.474	Haplochromis_burtoni
ENSAMXG00000038175	pop5	94	47.531	ENSHGLG00000011786	POP5	89	51.007	Heterocephalus_glaber_female
ENSAMXG00000038175	pop5	94	47.531	ENSHGLG00100014284	POP5	89	51.007	Heterocephalus_glaber_male
ENSAMXG00000038175	pop5	87	59.060	ENSHCOG00000011809	pop5	91	59.060	Hippocampus_comes
ENSAMXG00000038175	pop5	87	79.333	ENSIPUG00000003437	pop5	90	79.333	Ictalurus_punctatus
ENSAMXG00000038175	pop5	94	49.693	ENSSTOG00000012577	POP5	89	52.980	Ictidomys_tridecemlineatus
ENSAMXG00000038175	pop5	83	55.944	ENSJJAG00000001080	Pop5	86	55.405	Jaculus_jaculus
ENSAMXG00000038175	pop5	85	63.946	ENSKMAG00000011158	-	86	63.946	Kryptolebias_marmoratus
ENSAMXG00000038175	pop5	92	59.494	ENSLBEG00000008652	pop5	81	63.087	Labrus_bergylta
ENSAMXG00000038175	pop5	93	49.375	ENSLACG00000018188	POP5	94	50.658	Latimeria_chalumnae
ENSAMXG00000038175	pop5	86	56.757	ENSLOCG00000002924	pop5	90	55.921	Lepisosteus_oculatus
ENSAMXG00000038175	pop5	94	50.303	ENSLAFG00000014545	POP5	89	53.595	Loxodonta_africana
ENSAMXG00000038175	pop5	85	53.691	ENSMFAG00000045933	POP5	96	52.980	Macaca_fascicularis
ENSAMXG00000038175	pop5	85	53.691	ENSMMUG00000040120	POP5	92	52.980	Macaca_mulatta
ENSAMXG00000038175	pop5	85	53.691	ENSMNEG00000041716	POP5	92	52.980	Macaca_nemestrina
ENSAMXG00000038175	pop5	85	53.020	ENSMLEG00000029377	POP5	92	52.318	Mandrillus_leucophaeus
ENSAMXG00000038175	pop5	89	61.438	ENSMAMG00000002108	pop5	89	62.416	Mastacembelus_armatus
ENSAMXG00000038175	pop5	88	65.132	ENSMZEG00005000069	-	90	65.132	Maylandia_zebra
ENSAMXG00000038175	pop5	94	50.307	ENSMAUG00000019670	Pop5	89	53.642	Mesocricetus_auratus
ENSAMXG00000038175	pop5	92	45.509	ENSMICG00000008692	POP5	88	52.980	Microcebus_murinus
ENSAMXG00000038175	pop5	98	47.647	ENSMOCG00000013322	Pop5	83	54.225	Microtus_ochrogaster
ENSAMXG00000038175	pop5	82	61.702	ENSMMOG00000010471	pop5	86	61.702	Mola_mola
ENSAMXG00000038175	pop5	97	50.898	ENSMODG00000003066	POP5	61	55.034	Monodelphis_domestica
ENSAMXG00000038175	pop5	86	61.486	ENSMALG00000017797	-	88	61.905	Monopterus_albus
ENSAMXG00000038175	pop5	94	50.307	MGP_CAROLIEiJ_G0027618	Pop5	89	53.642	Mus_caroli
ENSAMXG00000038175	pop5	94	50.307	ENSMUSG00000060152	Pop5	89	53.642	Mus_musculus
ENSAMXG00000038175	pop5	94	49.693	MGP_PahariEiJ_G0024198	Pop5	89	52.980	Mus_pahari
ENSAMXG00000038175	pop5	94	49.693	MGP_SPRETEiJ_G0028616	Pop5	89	52.980	Mus_spretus
ENSAMXG00000038175	pop5	87	52.980	ENSMPUG00000003221	POP5	89	52.980	Mustela_putorius_furo
ENSAMXG00000038175	pop5	83	53.793	ENSMLUG00000014657	POP5	91	52.941	Myotis_lucifugus
ENSAMXG00000038175	pop5	83	53.846	ENSNGAG00000002594	Pop5	88	52.980	Nannospalax_galili
ENSAMXG00000038175	pop5	65	59.821	ENSNBRG00000001020	-	83	59.821	Neolamprologus_brichardi
ENSAMXG00000038175	pop5	85	53.691	ENSNLEG00000015839	POP5	91	52.980	Nomascus_leucogenys
ENSAMXG00000038175	pop5	93	50.000	ENSMEUG00000015288	POP5	92	53.020	Notamacropus_eugenii
ENSAMXG00000038175	pop5	83	52.113	ENSOPRG00000004327	POP5	83	52.113	Ochotona_princeps
ENSAMXG00000038175	pop5	81	49.286	ENSODEG00000010351	-	88	49.286	Octodon_degus
ENSAMXG00000038175	pop5	83	51.408	ENSODEG00000006549	-	89	50.667	Octodon_degus
ENSAMXG00000038175	pop5	88	65.789	ENSONIG00000011172	pop5	90	65.789	Oreochromis_niloticus
ENSAMXG00000038175	pop5	55	58.947	ENSOANG00000001792	-	87	58.586	Ornithorhynchus_anatinus
ENSAMXG00000038175	pop5	83	51.408	ENSOCUG00000006537	POP5	88	50.667	Oryctolagus_cuniculus
ENSAMXG00000038175	pop5	97	53.293	ENSORLG00000014745	pop5	87	60.000	Oryzias_latipes
ENSAMXG00000038175	pop5	84	60.690	ENSORLG00020001168	pop5	87	60.690	Oryzias_latipes_hni
ENSAMXG00000038175	pop5	84	58.503	ENSORLG00015013535	pop5	87	58.503	Oryzias_latipes_hsok
ENSAMXG00000038175	pop5	97	54.491	ENSOMEG00000017643	pop5	88	60.544	Oryzias_melastigma
ENSAMXG00000038175	pop5	85	52.703	ENSOGAG00000008528	POP5	90	52.703	Otolemur_garnettii
ENSAMXG00000038175	pop5	92	48.148	ENSOARG00000012764	POP5	88	50.658	Ovis_aries
ENSAMXG00000038175	pop5	85	53.691	ENSPPAG00000043719	POP5	92	52.980	Pan_paniscus
ENSAMXG00000038175	pop5	97	48.214	ENSPPRG00000006474	POP5	88	53.642	Panthera_pardus
ENSAMXG00000038175	pop5	97	48.214	ENSPTIG00000012194	POP5	88	53.642	Panthera_tigris_altaica
ENSAMXG00000038175	pop5	85	53.691	ENSPTRG00000005543	POP5	92	52.980	Pan_troglodytes
ENSAMXG00000038175	pop5	85	53.691	ENSPANG00000014166	POP5	92	52.980	Papio_anubis
ENSAMXG00000038175	pop5	88	63.816	ENSPKIG00000025154	pop5	92	63.816	Paramormyrops_kingsleyae
ENSAMXG00000038175	pop5	63	53.704	ENSPSIG00000013154	POP5	80	56.566	Pelodiscus_sinensis
ENSAMXG00000038175	pop5	96	52.121	ENSPMGG00000000812	-	90	56.376	Periophthalmus_magnuspinnatus
ENSAMXG00000038175	pop5	92	51.250	ENSPEMG00000017493	Pop5	89	53.642	Peromyscus_maniculatus_bairdii
ENSAMXG00000038175	pop5	86	57.718	ENSPFOG00000013000	pop5	97	54.286	Poecilia_formosa
ENSAMXG00000038175	pop5	86	58.108	ENSPLAG00000014070	pop5	88	58.503	Poecilia_latipinna
ENSAMXG00000038175	pop5	86	58.108	ENSPMEG00000024039	pop5	88	58.503	Poecilia_mexicana
ENSAMXG00000038175	pop5	86	58.108	ENSPMEG00000012863	POP5	88	58.503	Poecilia_mexicana
ENSAMXG00000038175	pop5	86	61.486	ENSPREG00000020151	pop5	88	61.905	Poecilia_reticulata
ENSAMXG00000038175	pop5	85	54.362	ENSPPYG00000005036	POP5	78	53.642	Pongo_abelii
ENSAMXG00000038175	pop5	60	55.238	ENSPCAG00000004788	POP5	100	55.238	Procavia_capensis
ENSAMXG00000038175	pop5	83	53.147	ENSPCOG00000017618	POP5	88	52.318	Propithecus_coquereli
ENSAMXG00000038175	pop5	83	53.846	ENSPVAG00000002233	POP5	88	52.980	Pteropus_vampyrus
ENSAMXG00000038175	pop5	88	65.789	ENSPNYG00000002679	pop5	90	65.789	Pundamilia_nyererei
ENSAMXG00000038175	pop5	85	79.452	ENSPNAG00000012662	pop5	82	79.452	Pygocentrus_nattereri
ENSAMXG00000038175	pop5	92	50.000	ENSRNOG00000001199	Pop5	89	52.318	Rattus_norvegicus
ENSAMXG00000038175	pop5	83	53.147	ENSRBIG00000043505	POP5	96	52.318	Rhinopithecus_bieti
ENSAMXG00000038175	pop5	83	53.147	ENSRROG00000045063	POP5	96	52.318	Rhinopithecus_roxellana
ENSAMXG00000038175	pop5	85	53.691	ENSSBOG00000032691	POP5	100	54.015	Saimiri_boliviensis_boliviensis
ENSAMXG00000038175	pop5	88	65.789	ENSSFOG00015005630	pop5	90	65.789	Scleropages_formosus
ENSAMXG00000038175	pop5	85	63.087	ENSSMAG00000018868	pop5	88	63.087	Scophthalmus_maximus
ENSAMXG00000038175	pop5	97	58.084	ENSSDUG00000001282	-	89	63.758	Seriola_dumerili
ENSAMXG00000038175	pop5	97	58.683	ENSSLDG00000017031	pop5	89	63.758	Seriola_lalandi_dorsalis
ENSAMXG00000038175	pop5	97	58.683	ENSSLDG00000003801	-	89	63.758	Seriola_lalandi_dorsalis
ENSAMXG00000038175	pop5	60	53.333	ENSSARG00000005564	POP5	64	53.333	Sorex_araneus
ENSAMXG00000038175	pop5	85	54.422	ENSSPUG00000015531	POP5	91	53.289	Sphenodon_punctatus
ENSAMXG00000038175	pop5	85	61.224	ENSSPAG00000015306	pop5	88	61.224	Stegastes_partitus
ENSAMXG00000038175	pop5	92	51.553	ENSSSCG00000009912	POP5	88	54.305	Sus_scrofa
ENSAMXG00000038175	pop5	94	49.068	ENSTGUG00000009602	POP5	91	51.007	Taeniopygia_guttata
ENSAMXG00000038175	pop5	94	56.522	ENSTRUG00000016214	pop5	89	61.905	Takifugu_rubripes
ENSAMXG00000038175	pop5	98	51.479	ENSTNIG00000011465	pop5	85	58.451	Tetraodon_nigroviridis
ENSAMXG00000038175	pop5	83	55.944	ENSTBEG00000010131	POP5	89	54.967	Tupaia_belangeri
ENSAMXG00000038175	pop5	92	49.689	ENSTTRG00000000153	POP5	88	52.318	Tursiops_truncatus
ENSAMXG00000038175	pop5	90	49.677	ENSUAMG00000015541	POP5	69	51.678	Ursus_americanus
ENSAMXG00000038175	pop5	91	50.955	ENSUMAG00000006137	POP5	88	52.980	Ursus_maritimus
ENSAMXG00000038175	pop5	92	51.553	ENSVPAG00000010365	POP5	88	54.305	Vicugna_pacos
ENSAMXG00000038175	pop5	91	50.955	ENSVVUG00000021154	POP5	88	52.980	Vulpes_vulpes
ENSAMXG00000038175	pop5	59	56.436	ENSXETG00000031793	POP5	87	57.576	Xenopus_tropicalis
ENSAMXG00000038175	pop5	86	60.811	ENSXMAG00000003508	-	77	61.224	Xiphophorus_maculatus