EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000038245 (Gene tree)
Gene ID: 103029772
Gene Symbol: si:ch211-256m1.8
Alias: -
Full Name: uncharacterized LOC103029772
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 12621 bases
Position: chr23:3451083-3463703
Accession: 103029772
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000037224	tRNA-synt_2	PF00152.20	1.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000033495	-	7232	XM_007239025	ENSAMXP00000037224	1582 (aa)	XP_007239087	UPI000BBD54A4

Gene Model

Click here to download ENSAMXG00000038245's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex00250	Alanine, aspartate and glutamate metabolism	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038245's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038245	si:ch211-256m1.8	100	67.189	ENSAPOG00000007012	si:ch211-256m1.8	100	67.189	Acanthochromis_polyacanthus
ENSAMXG00000038245	si:ch211-256m1.8	100	67.314	ENSAOCG00000012258	si:ch211-256m1.8	100	67.314	Amphiprion_ocellaris
ENSAMXG00000038245	si:ch211-256m1.8	100	67.188	ENSAPEG00000002724	si:ch211-256m1.8	100	67.188	Amphiprion_percula
ENSAMXG00000038245	si:ch211-256m1.8	100	68.989	ENSATEG00000006278	si:ch211-256m1.8	100	68.989	Anabas_testudineus
ENSAMXG00000038245	si:ch211-256m1.8	100	67.356	ENSACLG00000011503	si:ch211-256m1.8	100	67.356	Astatotilapia_calliptera
ENSAMXG00000038245	si:ch211-256m1.8	100	67.544	ENSCSEG00000006255	si:ch211-256m1.8	100	67.544	Cynoglossus_semilaevis
ENSAMXG00000038245	si:ch211-256m1.8	100	66.646	ENSCVAG00000003376	si:ch211-256m1.8	100	66.646	Cyprinodon_variegatus
ENSAMXG00000038245	si:ch211-256m1.8	100	75.992	ENSDARG00000055172	si:ch211-256m1.8	100	75.992	Danio_rerio
ENSAMXG00000038245	si:ch211-256m1.8	100	70.990	ENSELUG00000010546	si:ch211-256m1.8	100	70.990	Esox_lucius
ENSAMXG00000038245	si:ch211-256m1.8	100	66.897	ENSFHEG00000005847	si:ch211-256m1.8	100	66.929	Fundulus_heteroclitus
ENSAMXG00000038245	si:ch211-256m1.8	100	67.461	ENSGAFG00000010269	si:ch211-256m1.8	100	67.461	Gambusia_affinis
ENSAMXG00000038245	si:ch211-256m1.8	100	67.481	ENSHBUG00000014407	si:ch211-256m1.8	100	67.481	Haplochromis_burtoni
ENSAMXG00000038245	si:ch211-256m1.8	100	64.765	ENSHCOG00000006884	si:ch211-256m1.8	100	65.764	Hippocampus_comes
ENSAMXG00000038245	si:ch211-256m1.8	100	80.468	ENSIPUG00000022659	si:ch211-256m1.8	100	80.468	Ictalurus_punctatus
ENSAMXG00000038245	si:ch211-256m1.8	100	67.544	ENSKMAG00000016377	si:ch211-256m1.8	100	67.544	Kryptolebias_marmoratus
ENSAMXG00000038245	si:ch211-256m1.8	100	69.091	ENSLBEG00000010639	si:ch211-256m1.8	100	69.091	Labrus_bergylta
ENSAMXG00000038245	si:ch211-256m1.8	100	61.385	ENSLOCG00000011127	si:ch211-256m1.8	100	61.385	Lepisosteus_oculatus
ENSAMXG00000038245	si:ch211-256m1.8	99	67.610	ENSMAMG00000005651	si:ch211-256m1.8	99	67.610	Mastacembelus_armatus
ENSAMXG00000038245	si:ch211-256m1.8	100	67.419	ENSMZEG00005006924	si:ch211-256m1.8	100	67.419	Maylandia_zebra
ENSAMXG00000038245	si:ch211-256m1.8	100	64.846	ENSMMOG00000001736	si:ch211-256m1.8	100	64.846	Mola_mola
ENSAMXG00000038245	si:ch211-256m1.8	100	67.293	ENSNBRG00000005143	si:ch211-256m1.8	100	67.293	Neolamprologus_brichardi
ENSAMXG00000038245	si:ch211-256m1.8	100	65.725	ENSORLG00000022248	si:ch211-256m1.8	100	65.725	Oryzias_latipes
ENSAMXG00000038245	si:ch211-256m1.8	100	65.160	ENSORLG00020000214	si:ch211-256m1.8	100	65.078	Oryzias_latipes_hni
ENSAMXG00000038245	si:ch211-256m1.8	100	65.138	ENSORLG00015020297	si:ch211-256m1.8	100	65.354	Oryzias_latipes_hsok
ENSAMXG00000038245	si:ch211-256m1.8	100	65.307	ENSOMEG00000004519	si:ch211-256m1.8	100	65.547	Oryzias_melastigma
ENSAMXG00000038245	si:ch211-256m1.8	96	68.481	ENSPKIG00000007399	si:ch211-256m1.8	99	68.481	Paramormyrops_kingsleyae
ENSAMXG00000038245	si:ch211-256m1.8	100	61.737	ENSPMGG00000007698	si:ch211-256m1.8	100	61.737	Periophthalmus_magnuspinnatus
ENSAMXG00000038245	si:ch211-256m1.8	100	67.817	ENSPFOG00000005178	si:ch211-256m1.8	100	67.817	Poecilia_formosa
ENSAMXG00000038245	si:ch211-256m1.8	100	67.712	ENSPLAG00000006872	si:ch211-256m1.8	100	67.712	Poecilia_latipinna
ENSAMXG00000038245	si:ch211-256m1.8	100	67.629	ENSPMEG00000021815	si:ch211-256m1.8	100	67.629	Poecilia_mexicana
ENSAMXG00000038245	si:ch211-256m1.8	100	67.837	ENSPREG00000018669	si:ch211-256m1.8	100	67.837	Poecilia_reticulata
ENSAMXG00000038245	si:ch211-256m1.8	100	67.168	ENSPNYG00000018038	si:ch211-256m1.8	100	67.168	Pundamilia_nyererei
ENSAMXG00000038245	si:ch211-256m1.8	99	86.013	ENSPNAG00000003552	si:ch211-256m1.8	99	86.013	Pygocentrus_nattereri
ENSAMXG00000038245	si:ch211-256m1.8	99	84.177	ENSPNAG00000018965	-	99	84.177	Pygocentrus_nattereri
ENSAMXG00000038245	si:ch211-256m1.8	100	67.376	ENSSFOG00015008344	si:ch211-256m1.8	100	67.376	Scleropages_formosus
ENSAMXG00000038245	si:ch211-256m1.8	100	68.550	ENSSMAG00000007562	si:ch211-256m1.8	100	68.550	Scophthalmus_maximus
ENSAMXG00000038245	si:ch211-256m1.8	100	70.326	ENSSDUG00000018180	si:ch211-256m1.8	100	70.326	Seriola_dumerili
ENSAMXG00000038245	si:ch211-256m1.8	100	70.263	ENSSLDG00000020310	si:ch211-256m1.8	100	70.263	Seriola_lalandi_dorsalis
ENSAMXG00000038245	si:ch211-256m1.8	100	67.334	ENSSPAG00000013419	si:ch211-256m1.8	100	67.334	Stegastes_partitus
ENSAMXG00000038245	si:ch211-256m1.8	100	61.337	ENSTRUG00000023803	si:ch211-256m1.8	100	61.337	Takifugu_rubripes
ENSAMXG00000038245	si:ch211-256m1.8	100	67.712	ENSXCOG00000017726	si:ch211-256m1.8	100	67.712	Xiphophorus_couchianus
ENSAMXG00000038245	si:ch211-256m1.8	100	67.649	ENSXMAG00000026576	si:ch211-256m1.8	100	67.649	Xiphophorus_maculatus