EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000038259 (Gene tree)
Gene ID: 103026482
Gene Symbol: -
Alias: -
Full Name: SON DNA binding protein
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 32358 bases
Position: chr12:29589189-29621546
Accession: 103026482
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000034650	dsrm	PF00035.26	6e-11	1	1
ENSAMXP00000034650	DND1_DSRM	PF14709.7	2e-13	1	1
ENSAMXP00000034650	G-patch	PF01585.23	7.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000032599	-	5883	XM_022674968	ENSAMXP00000034650	1158 (aa)	XP_022530689	UPI000BBDD9D0

Gene Model

Click here to download ENSAMXG00000038259's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038259's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038259	-	69	67.263	ENSAPOG00000000559	-	57	67.084	Acanthochromis_polyacanthus
ENSAMXG00000038259	-	63	67.140	ENSAOCG00000004262	-	57	66.963	Amphiprion_ocellaris
ENSAMXG00000038259	-	63	67.140	ENSAPEG00000009136	-	57	67.494	Amphiprion_percula
ENSAMXG00000038259	-	64	64.947	ENSACLG00000007065	-	57	66.370	Astatotilapia_calliptera
ENSAMXG00000038259	-	64	66.014	ENSGAFG00000016463	-	57	65.302	Gambusia_affinis
ENSAMXG00000038259	-	65	65.836	ENSKMAG00000012003	-	56	65.480	Kryptolebias_marmoratus
ENSAMXG00000038259	-	64	64.947	ENSMZEG00005018999	-	57	66.370	Maylandia_zebra
ENSAMXG00000038259	-	64	65.364	ENSPLAG00000008338	-	57	65.009	Poecilia_latipinna
ENSAMXG00000038259	-	63	65.751	ENSPMEG00000017611	-	57	65.009	Poecilia_mexicana
ENSAMXG00000038259	-	64	65.542	ENSPREG00000017979	-	57	65.364	Poecilia_reticulata
ENSAMXG00000038259	-	70	83.537	ENSPNAG00000009991	-	71	81.655	Pygocentrus_nattereri
ENSAMXG00000038259	-	63	67.736	ENSSDUG00000018550	-	58	67.736	Seriola_dumerili
ENSAMXG00000038259	-	67	65.490	ENSSPAG00000014575	-	55	67.736	Stegastes_partitus
ENSAMXG00000038259	-	67	65.187	ENSXMAG00000025239	-	57	64.654	Xiphophorus_maculatus