EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000038308 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 6577 bases
Position: chrAPWO02000950.1:2596-9172
Accession: 103036527
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000030986	RNase_Zc3h12a	PF11977.8	2.8e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000052030	-	2241	XM_022686964	ENSAMXP00000030986	746 (aa)	XP_022542685	-

Gene Model

Click here to download ENSAMXG00000038308's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038308's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000038308	-	86	44.034	ENSAMXG00000011328	zc3h12b	79	43.304
ENSAMXG00000038308	-	100	89.975	ENSAMXG00000005320	-	100	89.975

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038308	-	94	44.245	ENSG00000102053	ZC3H12B	97	42.944	Homo_sapiens
ENSAMXG00000038308	-	69	47.157	ENSAMEG00000006955	ZC3H12B	92	45.983	Ailuropoda_melanoleuca
ENSAMXG00000038308	-	100	47.696	ENSACIG00000005689	-	99	47.362	Amphilophus_citrinellus
ENSAMXG00000038308	-	86	45.700	ENSAOCG00000010094	zc3h12b	94	44.444	Amphiprion_ocellaris
ENSAMXG00000038308	-	86	46.797	ENSACAG00000013582	ZC3H12B	90	45.889	Anolis_carolinensis
ENSAMXG00000038308	-	94	43.885	ENSANAG00000010296	ZC3H12B	97	42.701	Aotus_nancymaae
ENSAMXG00000038308	-	86	45.607	ENSACLG00000007669	zc3h12b	83	50.749	Astatotilapia_calliptera
ENSAMXG00000038308	-	95	42.705	ENSBTAG00000002206	ZC3H12B	98	42.289	Bos_taurus
ENSAMXG00000038308	-	91	44.569	ENSCJAG00000001427	ZC3H12B	93	43.544	Callithrix_jacchus
ENSAMXG00000038308	-	86	44.692	ENSCAFG00000031307	ZC3H12B	89	44.267	Canis_familiaris
ENSAMXG00000038308	-	86	44.692	ENSCAFG00020017995	ZC3H12B	89	44.267	Canis_lupus_dingo
ENSAMXG00000038308	-	68	45.501	ENSCHIG00000011723	ZC3H12B	95	45.486	Capra_hircus
ENSAMXG00000038308	-	67	40.034	ENSCAPG00000000650	ZC3H12B	80	46.269	Cavia_aperea
ENSAMXG00000038308	-	94	43.765	ENSCCAG00000030171	ZC3H12B	87	48.246	Cebus_capucinus
ENSAMXG00000038308	-	94	44.005	ENSCATG00000044845	ZC3H12B	97	42.822	Cercocebus_atys
ENSAMXG00000038308	-	86	45.942	ENSCLAG00000003600	ZC3H12B	80	51.800	Chinchilla_lanigera
ENSAMXG00000038308	-	86	47.089	ENSCPBG00000006983	ZC3H12B	95	45.145	Chrysemys_picta_bellii
ENSAMXG00000038308	-	94	44.005	ENSCANG00000006746	ZC3H12B	97	42.822	Colobus_angolensis_palliatus
ENSAMXG00000038308	-	86	45.198	ENSCSEG00000013686	zc3h12b	91	44.329	Cynoglossus_semilaevis
ENSAMXG00000038308	-	86	45.503	ENSDNOG00000038439	ZC3H12B	89	44.414	Dasypus_novemcinctus
ENSAMXG00000038308	-	86	45.812	ENSDORG00000024832	Zc3h12b	79	52.104	Dipodomys_ordii
ENSAMXG00000038308	-	75	40.413	ENSETEG00000012095	ZC3H12B	83	39.408	Echinops_telfairi
ENSAMXG00000038308	-	91	40.000	ENSEASG00005006995	ZC3H12B	79	44.890	Equus_asinus_asinus
ENSAMXG00000038308	-	91	43.975	ENSECAG00000020993	ZC3H12B	76	57.031	Equus_caballus
ENSAMXG00000038308	-	86	46.211	ENSELUG00000010689	zc3h12b	83	44.043	Esox_lucius
ENSAMXG00000038308	-	91	43.896	ENSFCAG00000032299	ZC3H12B	94	43.287	Felis_catus
ENSAMXG00000038308	-	99	43.665	ENSFHEG00000014717	-	79	66.769	Fundulus_heteroclitus
ENSAMXG00000038308	-	86	47.564	ENSGALG00000039391	ZC3H12B	79	55.263	Gallus_gallus
ENSAMXG00000038308	-	86	45.281	ENSGAFG00000006871	zc3h12b	83	50.366	Gambusia_affinis
ENSAMXG00000038308	-	99	42.873	ENSGAFG00000004701	-	86	50.825	Gambusia_affinis
ENSAMXG00000038308	-	76	43.662	ENSGACG00000020334	zc3h12b	58	66.899	Gasterosteus_aculeatus
ENSAMXG00000038308	-	86	46.461	ENSGAGG00000005569	ZC3H12B	84	51.970	Gopherus_agassizii
ENSAMXG00000038308	-	94	44.245	ENSGGOG00000024638	ZC3H12B	97	43.066	Gorilla_gorilla
ENSAMXG00000038308	-	86	45.736	ENSHBUG00000000645	zc3h12b	83	50.936	Haplochromis_burtoni
ENSAMXG00000038308	-	68	56.793	ENSHBUG00000003376	-	99	44.828	Haplochromis_burtoni
ENSAMXG00000038308	-	91	45.545	ENSHCOG00000008487	zc3h12b	95	44.612	Hippocampus_comes
ENSAMXG00000038308	-	100	73.913	ENSIPUG00000014830	-	100	73.540	Ictalurus_punctatus
ENSAMXG00000038308	-	86	44.143	ENSIPUG00000016745	zc3h12b	81	43.587	Ictalurus_punctatus
ENSAMXG00000038308	-	86	45.347	ENSSTOG00000020962	ZC3H12B	89	44.933	Ictidomys_tridecemlineatus
ENSAMXG00000038308	-	95	42.206	ENSJJAG00000015755	Zc3h12b	98	41.555	Jaculus_jaculus
ENSAMXG00000038308	-	87	44.246	ENSKMAG00000004921	zc3h12b	71	56.689	Kryptolebias_marmoratus
ENSAMXG00000038308	-	89	45.943	ENSLACG00000014526	ZC3H12B	95	44.581	Latimeria_chalumnae
ENSAMXG00000038308	-	92	45.141	ENSLOCG00000014631	zc3h12b	83	44.753	Lepisosteus_oculatus
ENSAMXG00000038308	-	100	56.243	ENSLOCG00000010717	-	97	56.816	Lepisosteus_oculatus
ENSAMXG00000038308	-	94	43.832	ENSLAFG00000014891	ZC3H12B	88	47.909	Loxodonta_africana
ENSAMXG00000038308	-	94	44.005	ENSMFAG00000042237	ZC3H12B	97	42.822	Macaca_fascicularis
ENSAMXG00000038308	-	94	44.005	ENSMMUG00000012261	ZC3H12B	97	42.822	Macaca_mulatta
ENSAMXG00000038308	-	94	44.005	ENSMNEG00000043003	ZC3H12B	97	42.822	Macaca_nemestrina
ENSAMXG00000038308	-	94	44.005	ENSMLEG00000042630	ZC3H12B	97	42.822	Mandrillus_leucophaeus
ENSAMXG00000038308	-	86	45.607	ENSMZEG00005007548	zc3h12b	83	50.749	Maylandia_zebra
ENSAMXG00000038308	-	86	47.301	ENSMGAG00000000759	ZC3H12B	84	52.269	Meleagris_gallopavo
ENSAMXG00000038308	-	86	45.216	ENSMICG00000010697	ZC3H12B	89	44.667	Microcebus_murinus
ENSAMXG00000038308	-	86	45.431	ENSMOCG00000000094	Zc3h12b	89	44.000	Microtus_ochrogaster
ENSAMXG00000038308	-	86	45.165	ENSMMOG00000008734	zc3h12b	83	50.379	Mola_mola
ENSAMXG00000038308	-	86	44.845	ENSMODG00000005206	ZC3H12B	91	44.764	Monodelphis_domestica
ENSAMXG00000038308	-	99	47.696	ENSMALG00000016807	-	99	46.705	Monopterus_albus
ENSAMXG00000038308	-	86	44.256	ENSMPUG00000001162	ZC3H12B	89	44.000	Mustela_putorius_furo
ENSAMXG00000038308	-	90	44.347	ENSMLUG00000013635	ZC3H12B	95	44.061	Myotis_lucifugus
ENSAMXG00000038308	-	91	44.694	ENSNLEG00000000383	ZC3H12B	93	43.671	Nomascus_leucogenys
ENSAMXG00000038308	-	73	46.456	ENSMEUG00000014075	ZC3H12B	84	45.538	Notamacropus_eugenii
ENSAMXG00000038308	-	95	43.504	ENSOCUG00000006130	ZC3H12B	98	43.030	Oryctolagus_cuniculus
ENSAMXG00000038308	-	99	43.367	ENSORLG00000009188	-	92	49.770	Oryzias_latipes
ENSAMXG00000038308	-	86	45.525	ENSORLG00000009556	zc3h12b	94	44.293	Oryzias_latipes
ENSAMXG00000038308	-	86	45.525	ENSORLG00020021793	zc3h12b	94	44.293	Oryzias_latipes_hni
ENSAMXG00000038308	-	99	42.186	ENSORLG00020019033	-	91	64.479	Oryzias_latipes_hni
ENSAMXG00000038308	-	89	50.000	ENSORLG00015020619	-	97	63.707	Oryzias_latipes_hsok
ENSAMXG00000038308	-	86	45.655	ENSORLG00015004818	zc3h12b	94	44.417	Oryzias_latipes_hsok
ENSAMXG00000038308	-	99	43.960	ENSOMEG00000018642	-	83	52.843	Oryzias_melastigma
ENSAMXG00000038308	-	86	45.747	ENSOMEG00000005768	zc3h12b	95	44.486	Oryzias_melastigma
ENSAMXG00000038308	-	95	43.452	ENSOGAG00000029439	ZC3H12B	98	42.615	Otolemur_garnettii
ENSAMXG00000038308	-	95	42.721	ENSOARG00000004959	ZC3H12B	98	42.303	Ovis_aries
ENSAMXG00000038308	-	94	44.245	ENSPPAG00000039530	ZC3H12B	97	42.944	Pan_paniscus
ENSAMXG00000038308	-	69	46.013	ENSPPRG00000004966	-	86	45.748	Panthera_pardus
ENSAMXG00000038308	-	69	46.013	ENSPTIG00000005571	ZC3H12B	92	45.748	Panthera_tigris_altaica
ENSAMXG00000038308	-	94	44.245	ENSPTRG00000021969	ZC3H12B	97	42.944	Pan_troglodytes
ENSAMXG00000038308	-	94	44.005	ENSPANG00000007944	ZC3H12B	97	42.822	Papio_anubis
ENSAMXG00000038308	-	86	44.903	ENSPKIG00000012946	zc3h12b	76	52.588	Paramormyrops_kingsleyae
ENSAMXG00000038308	-	86	45.774	ENSPKIG00000019893	ZC3H12B	97	43.811	Paramormyrops_kingsleyae
ENSAMXG00000038308	-	100	51.651	ENSPKIG00000012595	-	95	52.056	Paramormyrops_kingsleyae
ENSAMXG00000038308	-	86	45.740	ENSPMGG00000006009	zc3h12b	94	44.066	Periophthalmus_magnuspinnatus
ENSAMXG00000038308	-	86	46.263	ENSPCIG00000020264	ZC3H12B	90	45.478	Phascolarctos_cinereus
ENSAMXG00000038308	-	86	45.083	ENSPFOG00000019365	zc3h12b	78	51.992	Poecilia_formosa
ENSAMXG00000038308	-	86	44.862	ENSPLAG00000011981	zc3h12b	89	41.495	Poecilia_latipinna
ENSAMXG00000038308	-	86	41.816	ENSPMEG00000002552	zc3h12b	78	46.813	Poecilia_mexicana
ENSAMXG00000038308	-	86	44.656	ENSPREG00000020794	zc3h12b	78	51.697	Poecilia_reticulata
ENSAMXG00000038308	-	77	45.269	ENSPPYG00000020416	ZC3H12B	82	45.101	Pongo_abelii
ENSAMXG00000038308	-	55	67.254	ENSPCAG00000016422	ZC3H12B	71	51.276	Procavia_capensis
ENSAMXG00000038308	-	86	45.478	ENSPCOG00000020467	ZC3H12B	89	45.067	Propithecus_coquereli
ENSAMXG00000038308	-	77	42.319	ENSPVAG00000017352	ZC3H12B	72	50.000	Pteropus_vampyrus
ENSAMXG00000038308	-	86	45.736	ENSPNYG00000018012	zc3h12b	83	50.936	Pundamilia_nyererei
ENSAMXG00000038308	-	78	60.294	ENSPNYG00000007151	-	99	47.727	Pundamilia_nyererei
ENSAMXG00000038308	-	100	83.770	ENSPNAG00000017483	-	100	83.354	Pygocentrus_nattereri
ENSAMXG00000038308	-	86	45.431	ENSPNAG00000002567	zc3h12b	89	45.174	Pygocentrus_nattereri
ENSAMXG00000038308	-	86	45.538	ENSRNOG00000011508	Zc3h12b	77	57.480	Rattus_norvegicus
ENSAMXG00000038308	-	94	44.005	ENSRBIG00000036402	ZC3H12B	97	43.013	Rhinopithecus_bieti
ENSAMXG00000038308	-	94	44.005	ENSRROG00000036004	ZC3H12B	97	43.013	Rhinopithecus_roxellana
ENSAMXG00000038308	-	94	43.885	ENSSBOG00000004095	ZC3H12B	97	42.701	Saimiri_boliviensis_boliviensis
ENSAMXG00000038308	-	86	45.876	ENSSHAG00000006530	ZC3H12B	90	45.229	Sarcophilus_harrisii
ENSAMXG00000038308	-	94	43.757	ENSSFOG00015012866	ZC3H12B	96	43.305	Scleropages_formosus
ENSAMXG00000038308	-	86	45.032	ENSSFOG00015008769	zc3h12b	95	43.196	Scleropages_formosus
ENSAMXG00000038308	-	86	45.396	ENSSMAG00000018309	zc3h12b	82	51.032	Scophthalmus_maximus
ENSAMXG00000038308	-	86	45.327	ENSSDUG00000014078	zc3h12b	84	63.717	Seriola_dumerili
ENSAMXG00000038308	-	86	46.377	ENSSPUG00000014175	ZC3H12B	65	51.544	Sphenodon_punctatus
ENSAMXG00000038308	-	86	45.722	ENSSPAG00000022460	zc3h12b	94	44.320	Stegastes_partitus
ENSAMXG00000038308	-	86	45.288	ENSSSCG00000012367	ZC3H12B	89	44.415	Sus_scrofa
ENSAMXG00000038308	-	86	47.226	ENSTGUG00000002846	ZC3H12B	85	50.719	Taeniopygia_guttata
ENSAMXG00000038308	-	86	43.001	ENSTRUG00000012186	zc3h12b	71	57.389	Takifugu_rubripes
ENSAMXG00000038308	-	69	50.619	ENSTNIG00000015684	-	95	52.920	Tetraodon_nigroviridis
ENSAMXG00000038308	-	72	44.659	ENSTNIG00000011828	zc3h12b	84	44.042	Tetraodon_nigroviridis
ENSAMXG00000038308	-	68	45.336	ENSTBEG00000011540	ZC3H12B	84	45.484	Tupaia_belangeri
ENSAMXG00000038308	-	65	49.206	ENSTTRG00000007468	ZC3H12B	61	49.206	Tursiops_truncatus
ENSAMXG00000038308	-	95	43.147	ENSUAMG00000005098	ZC3H12B	98	42.010	Ursus_americanus
ENSAMXG00000038308	-	95	43.147	ENSUMAG00000017054	ZC3H12B	98	42.010	Ursus_maritimus
ENSAMXG00000038308	-	72	42.966	ENSVPAG00000009070	ZC3H12B	83	43.058	Vicugna_pacos
ENSAMXG00000038308	-	86	44.692	ENSVVUG00000022686	ZC3H12B	89	44.267	Vulpes_vulpes
ENSAMXG00000038308	-	90	44.157	ENSXETG00000017794	zc3h12b	93	43.500	Xenopus_tropicalis
ENSAMXG00000038308	-	98	44.988	ENSXCOG00000007996	-	89	65.289	Xiphophorus_couchianus
ENSAMXG00000038308	-	86	45.573	ENSXCOG00000006151	zc3h12b	79	52.485	Xiphophorus_couchianus
ENSAMXG00000038308	-	86	45.350	ENSXMAG00000018548	zc3h12b	78	52.485	Xiphophorus_maculatus