EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000038310 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 3595 bases
Position: chrAPWO02000312.1:21-3615
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000050482	RVT_1	PF00078.27	1.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000054331	-	3595	-	ENSAMXP00000050482	904 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000038310's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000038310's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000038310	-	70	38.141	ENSAMXG00000035923	-	82	38.141
ENSAMXG00000038310	-	64	59.208	ENSAMXG00000037157	-	67	59.208
ENSAMXG00000038310	-	66	60.684	ENSAMXG00000033786	-	89	60.684
ENSAMXG00000038310	-	67	37.273	ENSAMXG00000041369	-	54	37.273
ENSAMXG00000038310	-	73	73.596	ENSAMXG00000031305	-	67	73.596
ENSAMXG00000038310	-	54	34.877	ENSAMXG00000043821	-	69	34.877
ENSAMXG00000038310	-	64	31.140	ENSAMXG00000037864	-	53	31.140
ENSAMXG00000038310	-	86	54.370	ENSAMXG00000033138	-	54	54.489
ENSAMXG00000038310	-	58	39.241	ENSAMXG00000043892	-	70	38.095
ENSAMXG00000038310	-	77	34.012	ENSAMXG00000038033	-	74	34.012
ENSAMXG00000038310	-	77	34.302	ENSAMXG00000032559	-	62	34.302
ENSAMXG00000038310	-	94	79.505	ENSAMXG00000040149	-	54	79.505
ENSAMXG00000038310	-	66	39.697	ENSAMXG00000033197	-	85	39.697
ENSAMXG00000038310	-	58	40.575	ENSAMXG00000041896	-	76	40.575
ENSAMXG00000038310	-	74	34.018	ENSAMXG00000039912	-	50	34.018
ENSAMXG00000038310	-	75	36.577	ENSAMXG00000038578	-	51	36.577
ENSAMXG00000038310	-	76	42.000	ENSAMXG00000038169	-	55	42.000
ENSAMXG00000038310	-	100	96.903	ENSAMXG00000040104	-	54	96.903
ENSAMXG00000038310	-	73	30.362	ENSAMXG00000032571	-	51	30.459
ENSAMXG00000038310	-	100	80.642	ENSAMXG00000036523	-	54	80.642
ENSAMXG00000038310	-	76	39.423	ENSAMXG00000034382	-	60	39.423
ENSAMXG00000038310	-	75	33.724	ENSAMXG00000039114	-	67	33.724
ENSAMXG00000038310	-	87	96.962	ENSAMXG00000042521	-	62	96.962
ENSAMXG00000038310	-	86	57.781	ENSAMXG00000040695	-	56	57.475
ENSAMXG00000038310	-	66	37.975	ENSAMXG00000036113	-	58	37.975

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000038310	-	78	54.494	ENSATEG00000021232	-	69	54.494	Anabas_testudineus
ENSAMXG00000038310	-	87	52.490	ENSATEG00000018457	-	71	52.490	Anabas_testudineus
ENSAMXG00000038310	-	78	54.494	ENSATEG00000007261	-	69	54.494	Anabas_testudineus
ENSAMXG00000038310	-	87	41.717	ENSACAG00000029679	-	92	41.838	Anolis_carolinensis
ENSAMXG00000038310	-	87	41.787	ENSACAG00000029095	-	88	41.787	Anolis_carolinensis
ENSAMXG00000038310	-	76	43.394	ENSACAG00000028272	-	99	43.394	Anolis_carolinensis
ENSAMXG00000038310	-	87	41.838	ENSACAG00000028286	-	98	41.838	Anolis_carolinensis
ENSAMXG00000038310	-	86	49.936	ENSACLG00000017671	-	68	50.573	Astatotilapia_calliptera
ENSAMXG00000038310	-	59	57.491	ENSACLG00000025657	-	60	57.491	Astatotilapia_calliptera
ENSAMXG00000038310	-	86	50.513	ENSACLG00000008738	-	70	50.569	Astatotilapia_calliptera
ENSAMXG00000038310	-	87	50.442	ENSACLG00000022094	-	76	50.442	Astatotilapia_calliptera
ENSAMXG00000038310	-	56	54.043	ENSACLG00000001434	-	59	54.043	Astatotilapia_calliptera
ENSAMXG00000038310	-	76	53.712	ENSCVAG00000020653	-	77	53.712	Cyprinodon_variegatus
ENSAMXG00000038310	-	86	53.093	ENSDARG00000113243	BX511224.1	54	53.093	Danio_rerio
ENSAMXG00000038310	-	87	52.041	ENSDARG00000114583	BX890543.1	56	51.372	Danio_rerio
ENSAMXG00000038310	-	86	59.484	ENSDARG00000112601	FO704673.1	56	59.012	Danio_rerio
ENSAMXG00000038310	-	86	56.433	ENSDARG00000116832	CR749164.1	54	56.767	Danio_rerio
ENSAMXG00000038310	-	86	53.866	ENSDARG00000116402	CR925755.2	55	53.866	Danio_rerio
ENSAMXG00000038310	-	86	53.995	ENSDARG00000113678	BX511082.1	54	53.995	Danio_rerio
ENSAMXG00000038310	-	80	54.028	ENSDARG00000086495	BX546500.1	53	54.028	Danio_rerio
ENSAMXG00000038310	-	86	53.479	ENSDARG00000099359	CR855320.1	54	53.479	Danio_rerio
ENSAMXG00000038310	-	66	59.966	ENSDARG00000101547	CR354395.1	67	59.966	Danio_rerio
ENSAMXG00000038310	-	70	54.416	ENSFHEG00000015797	-	50	54.416	Fundulus_heteroclitus
ENSAMXG00000038310	-	78	50.071	ENSGAFG00000020459	-	73	50.071	Gambusia_affinis
ENSAMXG00000038310	-	86	51.344	ENSGAFG00000015891	-	55	51.601	Gambusia_affinis
ENSAMXG00000038310	-	62	47.090	ENSKMAG00000010098	-	64	47.090	Kryptolebias_marmoratus
ENSAMXG00000038310	-	80	51.599	ENSKMAG00000000229	-	76	51.599	Kryptolebias_marmoratus
ENSAMXG00000038310	-	87	50.702	ENSKMAG00000006793	-	55	50.702	Kryptolebias_marmoratus
ENSAMXG00000038310	-	78	54.339	ENSKMAG00000017146	-	67	54.339	Kryptolebias_marmoratus
ENSAMXG00000038310	-	86	52.964	ENSKMAG00000021870	-	56	52.919	Kryptolebias_marmoratus
ENSAMXG00000038310	-	86	51.088	ENSORLG00000023585	-	54	51.136	Oryzias_latipes
ENSAMXG00000038310	-	87	50.759	ENSORLG00000022062	-	74	50.759	Oryzias_latipes
ENSAMXG00000038310	-	86	50.830	ENSORLG00000027979	-	58	50.630	Oryzias_latipes
ENSAMXG00000038310	-	86	50.447	ENSORLG00000022229	-	54	50.504	Oryzias_latipes
ENSAMXG00000038310	-	87	51.458	ENSORLG00000022683	-	77	51.458	Oryzias_latipes
ENSAMXG00000038310	-	86	50.575	ENSORLG00000023674	-	70	50.830	Oryzias_latipes
ENSAMXG00000038310	-	78	53.296	ENSORLG00000023151	-	66	53.039	Oryzias_latipes
ENSAMXG00000038310	-	78	53.989	ENSORLG00000027523	-	77	53.989	Oryzias_latipes
ENSAMXG00000038310	-	86	51.018	ENSORLG00000024952	-	54	50.756	Oryzias_latipes
ENSAMXG00000038310	-	86	49.551	ENSORLG00000027415	-	71	49.367	Oryzias_latipes
ENSAMXG00000038310	-	78	53.296	ENSORLG00000027596	-	66	53.039	Oryzias_latipes
ENSAMXG00000038310	-	87	50.886	ENSORLG00000024241	-	74	50.886	Oryzias_latipes
ENSAMXG00000038310	-	86	51.605	ENSORLG00000025119	-	81	51.646	Oryzias_latipes
ENSAMXG00000038310	-	87	52.152	ENSORLG00000022135	-	73	52.405	Oryzias_latipes
ENSAMXG00000038310	-	78	51.695	ENSORLG00000023596	-	67	51.904	Oryzias_latipes
ENSAMXG00000038310	-	86	51.476	ENSORLG00000024028	-	81	51.519	Oryzias_latipes
ENSAMXG00000038310	-	86	50.639	ENSORLG00000024848	-	69	50.694	Oryzias_latipes
ENSAMXG00000038310	-	86	48.784	ENSORLG00000030436	-	72	48.230	Oryzias_latipes
ENSAMXG00000038310	-	87	52.296	ENSORLG00000024098	-	54	52.296	Oryzias_latipes
ENSAMXG00000038310	-	86	51.809	ENSORLG00000030165	-	54	51.809	Oryzias_latipes
ENSAMXG00000038310	-	86	50.449	ENSORLG00000026705	-	54	50.253	Oryzias_latipes
ENSAMXG00000038310	-	86	50.702	ENSORLG00000022696	-	54	50.756	Oryzias_latipes
ENSAMXG00000038310	-	86	51.216	ENSORLG00000022308	-	54	51.263	Oryzias_latipes
ENSAMXG00000038310	-	86	50.963	ENSORLG00000025108	-	54	50.759	Oryzias_latipes
ENSAMXG00000038310	-	75	51.479	ENSORLG00000025105	-	66	51.479	Oryzias_latipes
ENSAMXG00000038310	-	86	50.832	ENSORLG00000025100	-	70	50.832	Oryzias_latipes
ENSAMXG00000038310	-	86	51.220	ENSORLG00000023407	-	68	51.454	Oryzias_latipes
ENSAMXG00000038310	-	86	50.448	ENSORLG00000024912	-	70	50.253	Oryzias_latipes
ENSAMXG00000038310	-	86	50.578	ENSORLG00000029873	-	69	50.380	Oryzias_latipes
ENSAMXG00000038310	-	86	52.584	ENSORLG00000022632	-	54	53.282	Oryzias_latipes
ENSAMXG00000038310	-	86	50.765	ENSORLG00000029259	-	68	50.555	Oryzias_latipes
ENSAMXG00000038310	-	87	52.296	ENSORLG00000030124	-	54	52.296	Oryzias_latipes
ENSAMXG00000038310	-	86	51.091	ENSORLG00000023008	-	56	50.886	Oryzias_latipes
ENSAMXG00000038310	-	86	49.807	ENSORLG00000023431	-	53	49.873	Oryzias_latipes
ENSAMXG00000038310	-	87	50.381	ENSORLG00000029674	-	54	50.635	Oryzias_latipes
ENSAMXG00000038310	-	86	52.423	ENSORLG00000021952	-	54	52.585	Oryzias_latipes
ENSAMXG00000038310	-	86	51.605	ENSORLG00000027753	-	81	51.646	Oryzias_latipes
ENSAMXG00000038310	-	87	50.381	ENSORLG00000025916	-	54	50.381	Oryzias_latipes
ENSAMXG00000038310	-	87	50.254	ENSORLG00000024962	-	54	50.254	Oryzias_latipes
ENSAMXG00000038310	-	87	51.960	ENSORLG00000028742	-	70	52.212	Oryzias_latipes
ENSAMXG00000038310	-	86	50.064	ENSORLG00000027877	-	70	50.319	Oryzias_latipes
ENSAMXG00000038310	-	87	50.951	ENSORLG00000024925	-	77	51.013	Oryzias_latipes
ENSAMXG00000038310	-	87	51.139	ENSORLG00000024198	-	73	51.392	Oryzias_latipes
ENSAMXG00000038310	-	86	49.807	ENSORLG00000024838	-	53	49.873	Oryzias_latipes
ENSAMXG00000038310	-	86	50.192	ENSORLG00000022552	-	54	50.378	Oryzias_latipes
ENSAMXG00000038310	-	86	51.476	ENSORLG00000030585	-	56	51.519	Oryzias_latipes
ENSAMXG00000038310	-	87	52.423	ENSORLG00000026965	-	54	52.423	Oryzias_latipes
ENSAMXG00000038310	-	86	50.578	ENSORLG00000025220	-	78	50.822	Oryzias_latipes
ENSAMXG00000038310	-	86	50.963	ENSORLG00000030034	-	54	50.759	Oryzias_latipes
ENSAMXG00000038310	-	86	50.128	ENSORLG00000026067	-	54	50.639	Oryzias_latipes
ENSAMXG00000038310	-	72	51.227	ENSORLG00000024316	-	65	51.227	Oryzias_latipes
ENSAMXG00000038310	-	86	51.733	ENSORLG00000023147	-	81	51.772	Oryzias_latipes
ENSAMXG00000038310	-	87	50.381	ENSORLG00000022515	-	54	50.635	Oryzias_latipes
ENSAMXG00000038310	-	87	52.152	ENSORLG00000027153	-	56	52.459	Oryzias_latipes
ENSAMXG00000038310	-	86	49.807	ENSORLG00000023643	-	53	49.873	Oryzias_latipes
ENSAMXG00000038310	-	86	49.807	ENSORLG00020021845	-	81	49.620	Oryzias_latipes_hni
ENSAMXG00000038310	-	87	50.508	ENSORLG00020021168	-	54	50.761	Oryzias_latipes_hni
ENSAMXG00000038310	-	71	55.039	ENSORLG00020017439	-	59	55.039	Oryzias_latipes_hni
ENSAMXG00000038310	-	57	55.837	ENSORLG00020001657	-	59	55.837	Oryzias_latipes_hni
ENSAMXG00000038310	-	87	50.508	ENSORLG00020020735	-	54	50.761	Oryzias_latipes_hni
ENSAMXG00000038310	-	86	50.960	ENSORLG00020000745	-	54	51.010	Oryzias_latipes_hni
ENSAMXG00000038310	-	86	50.893	ENSORLG00020011308	-	68	50.678	Oryzias_latipes_hni
ENSAMXG00000038310	-	87	52.423	ENSORLG00020008167	-	54	52.423	Oryzias_latipes_hni
ENSAMXG00000038310	-	86	50.641	ENSORLG00020004934	-	70	50.695	Oryzias_latipes_hni
ENSAMXG00000038310	-	78	51.695	ENSORLG00020003377	-	61	51.460	Oryzias_latipes_hni
ENSAMXG00000038310	-	78	52.057	ENSORLG00020005114	-	66	52.057	Oryzias_latipes_hni
ENSAMXG00000038310	-	86	50.834	ENSORLG00020005485	-	67	50.633	Oryzias_latipes_hni
ENSAMXG00000038310	-	86	51.088	ENSORLG00020005141	-	56	51.088	Oryzias_latipes_hni
ENSAMXG00000038310	-	78	53.748	ENSORLG00020003499	-	50	53.748	Oryzias_latipes_hni
ENSAMXG00000038310	-	87	52.423	ENSORLG00020000947	-	54	52.423	Oryzias_latipes_hni
ENSAMXG00000038310	-	87	52.296	ENSORLG00020011809	-	54	52.296	Oryzias_latipes_hni
ENSAMXG00000038310	-	84	52.231	ENSORLG00020009070	-	53	52.231	Oryzias_latipes_hni
ENSAMXG00000038310	-	91	50.121	ENSORLG00020011789	-	68	50.363	Oryzias_latipes_hni
ENSAMXG00000038310	-	87	51.531	ENSORLG00020001553	-	54	51.531	Oryzias_latipes_hni
ENSAMXG00000038310	-	86	50.963	ENSORLG00020013042	-	81	51.013	Oryzias_latipes_hni
ENSAMXG00000038310	-	86	51.344	ENSORLG00020013601	-	54	51.389	Oryzias_latipes_hni
ENSAMXG00000038310	-	87	50.508	ENSORLG00020003988	-	54	50.761	Oryzias_latipes_hni
ENSAMXG00000038310	-	86	50.834	ENSORLG00015021482	-	54	51.075	Oryzias_latipes_hsok
ENSAMXG00000038310	-	65	54.899	ENSORLG00015021573	-	61	54.899	Oryzias_latipes_hsok
ENSAMXG00000038310	-	86	50.960	ENSORLG00015008912	-	54	51.010	Oryzias_latipes_hsok
ENSAMXG00000038310	-	86	50.834	ENSORLG00015011577	-	57	50.886	Oryzias_latipes_hsok
ENSAMXG00000038310	-	78	54.054	ENSORLG00015001210	-	66	53.463	Oryzias_latipes_hsok
ENSAMXG00000038310	-	85	51.562	ENSORLG00015020866	-	71	51.881	Oryzias_latipes_hsok
ENSAMXG00000038310	-	76	52.500	ENSORLG00015019969	-	52	52.500	Oryzias_latipes_hsok
ENSAMXG00000038310	-	86	50.128	ENSORLG00015022083	-	54	50.189	Oryzias_latipes_hsok
ENSAMXG00000038310	-	66	55.593	ENSORLG00015019527	-	53	55.593	Oryzias_latipes_hsok
ENSAMXG00000038310	-	76	51.749	ENSORLG00015014929	-	51	51.965	Oryzias_latipes_hsok
ENSAMXG00000038310	-	86	50.963	ENSORLG00015020941	-	75	50.759	Oryzias_latipes_hsok
ENSAMXG00000038310	-	86	51.341	ENSORLG00015021620	-	53	51.134	Oryzias_latipes_hsok
ENSAMXG00000038310	-	86	50.706	ENSORLG00015016198	-	54	50.948	Oryzias_latipes_hsok
ENSAMXG00000038310	-	86	50.321	ENSORLG00015006303	-	55	50.316	Oryzias_latipes_hsok
ENSAMXG00000038310	-	67	60.299	ENSOMEG00000011112	-	60	60.299	Oryzias_melastigma
ENSAMXG00000038310	-	73	56.627	ENSOMEG00000007684	-	51	56.627	Oryzias_melastigma
ENSAMXG00000038310	-	87	52.284	ENSOMEG00000013280	-	76	52.284	Oryzias_melastigma
ENSAMXG00000038310	-	51	58.531	ENSOMEG00000005417	-	54	58.531	Oryzias_melastigma
ENSAMXG00000038310	-	59	55.660	ENSOMEG00000006056	-	50	55.660	Oryzias_melastigma
ENSAMXG00000038310	-	86	57.051	ENSOMEG00000017119	-	53	57.268	Oryzias_melastigma
ENSAMXG00000038310	-	72	53.221	ENSOMEG00000011861	-	70	53.221	Oryzias_melastigma
ENSAMXG00000038310	-	86	50.192	ENSOMEG00000022422	-	54	50.448	Oryzias_melastigma
ENSAMXG00000038310	-	68	54.501	ENSPKIG00000009885	-	50	54.501	Paramormyrops_kingsleyae
ENSAMXG00000038310	-	76	53.061	ENSPKIG00000005143	-	59	53.061	Paramormyrops_kingsleyae
ENSAMXG00000038310	-	71	52.336	ENSPFOG00000022857	-	70	52.336	Poecilia_formosa
ENSAMXG00000038310	-	86	52.179	ENSPMEG00000022292	-	72	52.436	Poecilia_mexicana
ENSAMXG00000038310	-	78	52.137	ENSPREG00000005745	-	70	52.137	Poecilia_reticulata
ENSAMXG00000038310	-	90	52.812	ENSSLDG00000016219	-	76	52.812	Seriola_lalandi_dorsalis
ENSAMXG00000038310	-	83	44.518	ENSSPUG00000017371	-	65	44.782	Sphenodon_punctatus
ENSAMXG00000038310	-	87	50.888	ENSXCOG00000000074	-	57	51.269	Xiphophorus_couchianus